Chromium in plants

Chromium is an essential trace element and is associated with some biological pathways, especially with glucose tolerance. For these reasons, we decided to determine the concentration of chromium in two sets of Brazilian medicinal plants. The first group consisted of plants that are considered as antidiabetic, whereas the second included plants that do not have this therapeutic property. The concentration of chromium was determined by flameless atomic absorption. All the plants analyzed contain chromium in the normal range for this element, but the hypoglycemic plants contain more chromium than the others (1–4 μg/g compared to 0.5–1.5 μg/g).     

台湾和日本拟步甲在纬度分布上的比较研究

台湾和日本处在不同的地理纬度上,同属岛屿海洋性气候,前者地域面积远小于后者,拟步甲的物种多样性却大于后者。为弄清楚这些科学问题,作者采用G-F指数对从台湾到日本不同纬度梯度上的拟步甲多样性分布格局进行了比较分析,得到如下初步结论：(1) G-F指数从大到小依次是：台湾(21°N-25°N)(0．826)>日本(24°N-45°N)(0．824)>日本Ⅱ纬度区(30°N-35°N)(0．792)>日本Ⅰ纬度区(24°N-30°N)(0．765)>日本Ⅲ纬度区(35°N-40°N)(0．761)>日本Ⅳ纬度区(40°N-45°N)(0．603);(2)台湾拟步甲属的多样性(DG)、族的多样性(DF)和G-F指数(DG-F)均最高,分别是4．263、24．464和0．826;(3)各纬度上拟步甲的物种分布情况：台湾(21°N-25°N)(541种)>日本(24°N-45°N)(489种)>日本Ⅰ纬度区(24°N-30°N)(257种)>日本Ⅱ纬度区(30° N-35° N)(231种)>日本Ⅲ纬度区(35° N-40° N)(172种)>日本Ⅳ纬度区(40° N-45° N)(60种)。研究数据显示, G-F指数能较好地反映台湾和日本各地拟步甲族、属的多样性。其物种多样性在纬度上的分布表现为从南向北递减的趋势,并对其基本原因进行分析。作者首次基于台湾和日本两个岛屿拟步甲物种多样性的比较分析,对现有岛屿生物多样性的有关理论提出个人看法,认为岛屿生物地理学的“物种-面积关系理论”中的“岛屿面积越大,物种数量就越多”可能存在一定的局限性,不一定能客观地反映种类众多的现生岛屿昆虫物种多样性的实际情况。     

Identification and characterization of bi-thiazole-2,2′-diamines as kinase inhibitory scaffolds

Based on bioinformatics interrogation of the genome, > 500 mammalian protein kinases can be clustered within seven different groups. Of these kinases, the mitogen-activated protein kinase (MAPK) family forms part of the CMGC group of serine/threonine kinases that includes extracellular signal regulated kinases (ERKs), cJun N-terminal kinases (JNKs), and p38 MAPKs. With the JNKs considered attractive targets in the treatment of pathologies including diabetes and stroke, efforts have been directed to the discovery of new JNK inhibitory molecules that can be further developed as new therapeutics. Capitalizing on our biochemical understanding of JNK, we performed in silico screens of commercially available chemical databases to identify JNK1-interacting compounds and tested their in vitro JNK inhibitory activity. With in vitro and cell culture studies, we showed that the compound, 4′-methyl-N²-3-pyridinyl-4,5′-bi-1,3-thiazole-2,2′-diamine (JNK Docking (JD) compound 123, but not the related compound (4′-methyl-N ~ 2 ~ -(6-methyl-2-pyridinyl)-4,5′-bi-1,3-thiazole-2,2′-diamine (JD124), inhibited JNK1 activity towards a range of substrates. Molecular docking, saturation transfer difference NMR experiments and enzyme kinetic analyses revealed both ATP- and substrate-competitive inhibition of JNK by JD123. In characterizing JD123 further, we noted its ATP-competitive inhibition of the related p38-γ MAPK, but not ERK1, ERK2, or p38-α, p38-β or p38-δ. Further screening of a broad panel of kinases using 10 μM JD123, identified inhibition of kinases including protein kinase Bβ (PKBβ/Aktβ). Appropriately modified thiazole diamines, as typified by JD123, thus provide a new chemical scaffold for development of inhibitors for the JNK and p38-γ MAPKs as well as other kinases that are also potential therapeutic targets such as PKBβ/Aktβ.     

β‐Bulges: Extensive structural analyses of β‐sheets irregularities

β‐Sheets are quite frequent in protein structures and are stabilized by regular main‐chain hydrogen bond patterns. Irregularities in β‐sheets, named β‐bulges, are distorted regions between two consecutive hydrogen bonds. They disrupt the classical alternation of side chain direction and can alter the directionality of β‐strands. They are implicated in protein‐protein interactions and are introduced to avoid β‐strand aggregation. Five different types of β‐bulges are defined. Previous studies on β‐bulges were performed on a limited number of protein structures or one specific family. These studies evoked a potential conservation during evolution. In this work, we analyze the β‐bulge distribution and conservation in terms of local backbone conformations and amino acid composition. Our dataset consists of 66 times more β‐bulges than the last systematic study (Chan et al. Protein Science 1993, 2:1574–1590). Novel amino acid preferences are underlined and local structure conformations are highlighted by the use of a structural alphabet. We observed that β‐bulges are preferably localized at the N‐ and C‐termini of β‐strands, but contrary to the earlier studies, no significant conservation of β‐bulges was observed among structural homologues. Displacement of β‐bulges along the sequence was also investigated by Molecular Dynamics simulations.     

Structure of the femora and autotomous (postpygal) caudal vertebrae in the three-toed skink Chalcides chalcides (Reptilia: Squamata: Scincidae) and its applicability for age and growth rate determination

The limbs of the three-toed skink Chalcides chalcides are reduced to such a degree that the three digits are too small for skeletochronology. This study, performed on animals collected near Isernia (central Italy), describes the structure of the caudal vertebrae, which are often naturally lost due to autotomy, in order to determine whether they can be used to obtain data on age and growth with skeletochronological techniques. The reliability of the autotomous caudal vertebrae for skeletochronology was verified by performing skeletochronological analyses also on femora. Although the identification of the lines of arrested growth (LAGs) was easier in femora than in autotomous caudal vertebrae, a high correspondence of the LAG count between the two bones was observed. Females were larger and lived longer than males (4 and 3 years, respectively). For both sexes, the snout vent length (SVL) was significantly correlated with age. For both sexes, sexual maturity was attained after two hibernations from birth, beginning at the 20th month of age. At first reproduction, males had an SVL of 91–106 mm and females one of 111–150 mm. Von Bertalanffy growth curves of age versus SVL showed that females had slower growth rates than males for attaining their asymptotic SVL (females: 197 mm; males: 143 mm). The results provide the first data on age and growth of C. chalcide, and show that autotomous caudal vertebrae are reliable alternatives for obtaining such data for limb-reduced reptiles, avoiding the need to sacrifice or disable animals, as occurs when long bones are used.     

Phenology shifts at start vs. end of growing season in temperate vegetation over the Northern Hemisphere for the period 1982–2008

Changes in vegetative growing seasons are dominant indicators of the dynamic response of ecosystems to climate change. Therefore, knowledge of growing seasons over the past decades is essential to predict ecosystem changes. In this study, the long‐term changes in the growing seasons of temperate vegetation over the Northern Hemisphere were examined by analyzing satellite‐measured normalized difference vegetation index and reanalysis temperature during 1982–2008. Results showed that the length of the growing season (LOS) increased over the analysis period; however, the role of changes at the start of the growing season (SOS) and at the end of the growing season (EOS) differed depending on the time period. On a hemispheric scale, SOS advanced by 5.2 days in the early period (1982–1999) but advanced by only 0.2 days in the later period (2000–2008). EOS was delayed by 4.3 days in the early period, and it was further delayed by another 2.3 days in the later period. The difference between SOS and EOS in the later period was due to less warming during the preseason (January–April) before SOS compared with the magnitude of warming in the preseason (June–September) before EOS. At a regional scale, delayed EOS in later periods was shown. In North America, EOS was delayed by 8.1 days in the early period and delayed by another 1.3 days in the later period. In Europe, the delayed EOS by 8.2 days was more significant than the advanced SOS by 3.2 days in the later period. However, in East Asia, the overall increase in LOS during the early period was weakened in the later period. Admitting regional heterogeneity, changes in hemispheric features suggest that the longer‐lasting vegetation growth in recent decades can be attributed to extended leaf senescence in autumn rather than earlier spring leaf‐out.     

Bergmann's and Rensch's rules and the spur‐thighed tortoise (Testudo graeca)

Body size is an ecologically important variable in animals. The geographical size variation of most snakes and some lizards counters Bergmann's rule in that, among related taxa, the larger ones live at warmer latitudes. However, exceptions notwithstanding, and despite being ectothermic, turtles as a group tend to obey Bergmann's rule. We examined this idea in Testudo graeca, ranging from Morocco to Romania and to Iran with disputed systematics, both at the global scale (using literature) and within the focal area of Israel (using museum specimens). Both globally and locally, carapace length correlated with latitude, in accordance with Bergmann's rule. The scant data on reproduction fully support the hypothesis that Bergmann's rule enables larger clutches where the climate would limit repeated clutches. The sexual size dimorphism (SSD) was approached using two methodologies: (1) ‘conventional’, using globally literature data and locally museum samples and (2) ‘innovated’, using photographs of copulating tortoises from Israel and Turkey. By each methodology, SSD emerged as being male biased in the larger‐bodied populations and female biased in the smaller‐bodied populations, obeying Rensch's rule. Some observations support the hypothesis that the evolution of large males serves intermale combating. Finally, Rensch's rule was found to apply separately within Anatolia and within the Levant, possibly indicating that these populations are separate.     

气候变化背景下近30年祁连山高寒荒漠分布时空变化

高寒荒漠作为青藏高原植被带谱的顶端类型广泛分布于祁连山高海拔地区, 其生长和分布条件与周边区域差异明显, 对气候变化的响应更为敏感, 且研究较少。该文利用1990年以来的Landsat TM、OLI数据, 采用决策树分类和人工目视解译方法, 提取了祁连山高寒荒漠的分布范围。结合气候变化情况, 综合分析了气候变化背景下近30年祁连山高寒荒漠分布的动态变化及其时空差异。结果表明: (1)近30年增温气候变化过程中, 祁连山高寒荒漠分布范围呈萎缩趋势, 萎缩速率约为348.3 km ²·a ^-1, 萎缩变化幅度表现为西段>中段>东段, 局部地段上存在扩张现象。上述现象导致高寒荒漠下界平均海拔以每10年约15 m的平均速率向更高海拔推进, 向上推进幅度为西段>东段>中段; (2)受水热条件控制, 近30年祁连山高寒荒漠分布动态变化集中分布在低坡度地区。由于水热背景条件的空间差异, 祁连山东段和中段阳坡上高寒荒漠分布动态变化大于阴坡, 而在祁连山西段表现相反; (3) 1990年以来, 祁连山增温显著, 降水量微弱增加。在气候变化以及区域地形限制共同影响下, 祁连山高寒荒漠分布变化时空差异明显, 且过渡带上归一化植被指数与气温相关性高于降水量。以上结果表明, 气候变化影响祁连山高寒荒漠分布动态变化及其空间差异, 但气温是主要的影响因子, 增温促进了高寒荒漠下接植被带主体高寒草甸的生长。     

Obesity is an independent determinant of elevated C-reactive protein in healthy women but not men

Background and aims: High-sensitivity C-reactive protein (hs CRP) has emerged as an inflammatory biomarker to predict metabolic syndrome. Here, we investigate the association of hs CRP with metabolic variables and determine the risks for elevated hs CRP levels in healthy Singaporean adults.

Methods: We conducted a cross-sectional study of 225 participants (104 men). The levels of hs CRP and fasting lipid parameters were analyzed by COBAS. Body composition was determined with dual-energy X-ray absorptiometry.

Results: Twenty-one (9?%) participants had elevated hs CRP levels (>3?mg/mL). The levels of hs CRP had significant correlations (p?<0.05) with obesity and metabolic variables among women. Stepwise multivariate regression analysis identified FM (%) (accounted for 22.5% of the variability in hs CRP levels) as a major determinant of hs CRP levels. On multivariate regression, FM (%) was the independent determinant of intermediate and elevated hs CRP in women after adjustment for the potential confounders.

Conclusions: Obesity may play a direct role in the elevated hs CRP levels in women, but not men living in Singapore. This is probably due to different body composition or different effects of sex hormones on adipose tissue between men and women.