Twenty Years of Prompt Release of Vessels: Admissibility,Jurisdiction, and Recent Trends

The International Tribunal for the Law of the Sea (ITLOS) has a residual compulsory jurisdiction regarding the prompt release of seized vessels. This procedure is one of the novelties introduced in the UN Convention on the Law of the Sea and is unique in the international judicial universe because of both its procedural characteristics and its functions. This article highlights how prompt release cases do not necessarily stem from a dispute. This has a direct consequence for those whose interests the procedure protects and who can submit an application. The last part of this article discusses the recent trend where the release of vessels and crews has been requested in the context of provisional measures applications.     

Lessons learned from the virus indexing of Musa germplasm: insights from a multiyear collaboration

The Bioversity International Transit Center (ITC) for banana hosts more than 1500 accessions largely covering the genetic diversity of the genus Musa. Its objective is to conserve this genetic diversity and to supply plant materials to users worldwide. All the Musa accessions must be tested for virus presence and, if infected, virus elimination must be attempted, to enable the supply of virus‐free plant material. An international collaborative effort launched under the auspices of Bioversity International (2007–2013) finally led to the implementation of a two‐step process to test the accessions. The first step, called pre‐indexing, involved only molecular tests and was designed as a pre‐screen of new germplasm lines or existing accessions to reduce the need for post‐entry virus therapy and repeated virus indexing. The second step, called full indexing, was performed on either older existing accessions or newer accessions which tested negative during pre‐indexing, and involved molecular tests, transmission electron microscopy (TEM) and symptom observation. In total, 270 germplasm lines (434 samples) were pre‐indexed; while full indexing was carried out on 243 accessions (68 of which had been pre‐indexed). A significant proportion of the samples tested during pre‐indexing was infected with at least one virus (68%), showing the utility of this early pre‐screening step. Banana streak OL virus and Banana mild mosaic virus were the most commonly detected viruses during both pre‐ and full indexing. For 22 accessions, viral particles were observed by TEM in full indexing while the molecular tests were negative, underlining the importance of combining various detection techniques. After full indexing, viruses were not detected in 166 accessions, which were then released for international distribution from the ITC. This publication exemplifies how the practical application of diagnostic protocols can raise fundamental questions related to their appropriate use in routine practice and the need for their continuous monitoring and improvement after their first publication.     

Engineering bacterial thiosulfate and tetrathionate sensors for detecting gut inflammation

There is a groundswell of interest in using genetically engineered sensor bacteria to study gut microbiota pathways, and diagnose or treat associated diseases. Here, we computationally identify the first biological thiosulfate sensor and an improved tetrathionate sensor, both two‐component systems from marine Shewanella species, and validate them in laboratory Escherichia coli. Then, we port these sensors into a gut‐adapted probiotic E. coli strain, and develop a method based upon oral gavage and flow cytometry of colon and fecal samples to demonstrate that colon inflammation (colitis) activates the thiosulfate sensor in mice harboring native gut microbiota. Our thiosulfate sensor may have applications in bacterial diagnostics or therapeutics. Finally, our approach can be replicated for a wide range of bacterial sensors and should thus enable a new class of minimally invasive studies of gut microbiota pathways.     

Of beta diversity,variance, evenness,and dissimilarity

The amount of variation in species composition among sampling units or beta diversity has become a primary tool for connecting the spatial structure of species assemblages to ecological processes. Many different measures of beta diversity have been developed. Among them, the total variance in the community composition matrix has been proposed as a single‐number estimate of beta diversity. In this study, I first show that this measure summarizes the compositional variation among sampling units after nonlinear transformation of species abundances. Therefore, it is not always adequate for estimating beta diversity. Next, I propose an alternative approach for calculating beta diversity in which variance is substituted by a weighted measure of concentration (i.e., an inverse measure of evenness). The relationship between this new measure of beta diversity and so‐called multiple‐site dissimilarity measures is also discussed.     

Resistance irrelevant CYP417A2v2 was found degrading insecticide in Laodelphax striatellus

Cytochrome P450 monooxygenases (CYP s) usually overexpressed in resistant strain were found involved in oxidative detoxification of insecticides. In this study, an investigation was conducted to confirm if resistance irrelevant CYP s which were not overexpressed in resistant strain before, were capable of degrading insecticides. Three resistance irrelevant CYP s viz. CYP 417A2v2, CYP 425A1v2, and CYP 4DJ 1 from CYP 4 family of Laodelphax striatellus were randomly selected for experiments. CYP 417A2v2 and CYP 425A1v2 were found expressed successfully in Sf9 cell line while CYP 4DJ 1 was not expressed successfully and out of two expressed CYP s, only CYP 417A2v2 showed its efficient catalytic activity. For catalytic activity, three traditional model probe substrates and five insecticides were assayed. For the probe substrates screened, p‐nitroanisole and ethoxycoumarin were preferentially metabolized by CYP 417A2v2 (specific activity 3.76 ± 1.22 and 1.63 ± 0.37 nmol min^?1 mg protein^?1, respectively) and they may be potential diagnostic probes for this enzyme. Among insecticides, only imidacloprid was efficiently degraded by CYP 417A2v2. Incubation of imidacloprid with CYP 417A2v2 of L. striatellus and subsequent HPLC , LC ‐MS , and MS /MS analysis revealed the formation of imidacloprid metabolites, that is, 4′ or 5′hydroxy‐imidacloprid by hydroxylation. This result implies the exemption of CYP s character that it is not always, all the CYP s degrading insecticides being selected and overexpressed in resistant strains and the degrading CYP s without mutations to upregulate could be candidates during insecticide resistance evolution. This characterization of individual insect CYP s in insecticide degradation can provide insight for better understand of insecticide resistance development.     

黑土稻田CH4与N2O排放及减排措施研究

通过对黑土稻田CH₄和N₂O排放的观测,发现水稻生长季CH₄和N₂O排放量低于全国其它地区稻田CH₄和N₂O排放之间存在互为消长关系(r=-0．513,P<0．05),但在同样施肥水平条件下,间歇灌溉与长期淹灌相比,CH₄排放明显减少而N₂O略有增加,其相对综合温室效应被大大减少且水稻产量未受影响。为此,间歇灌溉可作为减少稻田温室气体排放的水分管理措施。另外,通过对CH₄和N₂O排放的相关微生物过程探讨,揭示产甲烷菌数与CH4排放问呈显著性正相关(R²=0．82,P<0．05),硝化菌数和反硝化菌数与N2O排放有重要关系。     

Germination ecology of the clonal herb Knautia arvensis: Regeneration strategy and geographic variation

Abstract. We investigated germination responses and seed recruitment in the clonal grassland herb Knautia arvensis (Dipsacaceae) throughout its distributional range in Norway. Four predicted relationships between germination responses and field regeneration behaviour were tested using phytotron experiments and experimental and observational field studies. Seedlings appeared in all experimental microsites in the field, corroborating phytotron predictions that gap‐ or depth‐sensing strategies should be absent in the species. Seasonal timing patterns were predicted from a cold stratification response in the phytotron, but these were not supported in the field. The relationship between dormancy, germinability during storage, and seed carry‐over in the field largely conformed to expectations. Seeds from four different geographical regions responded differently to temperature and cold stratification and storage. Dormancy and seed carry‐over was higher in seeds from a coastal population, where winters are relatively mild and the probability of repeated freeze‐thaw events is high, than in populations from mountain and inland areas, where winters are colder. This is discussed against two alternative hypotheses about the relationship between climate and dormancy in seasonal climates.     

Plant Quarantine as a Measure Against Invasive Alien Species: The Framework of the International Plant Protection Convention and the plant health regulations in the European Union

The introduction of several plant pests into Europe in the 19th century with disastrous consequences called for the development of plant quarantine measures to prevent the spread and introduction of pests of plants and plant products. With the purpose of harmonising these measures, and of promoting measures for pest control, the International Plant Protection Convention (IPPC) was developed to address organisms that are both directly and indirectly injurious to plants. It supplies a framework for measures against invasive alien species according to the Convention on Biological Diversity, as far as they are plant pests. Three examples of invasive alien species within the scope of the IPPC are given in the article: the fungus Ceratocystis fagacearum, the pinewood nematode Bursaphelenchus xylophilus and the flatworm Arthurdendyus triangulatus. In its 1997 revision, the IPPC provides for the establishment of International Standards for Phytosanitary Measures, being acknowledged by the Agreement on the Application of Sanitary and Phytosanitary Measures of the World Trade Organisation. Standards most important for invasive alien species are those on pest risk analysis, on requirements for the establishment of pest-free areas, on surveillance, on pest eradication programmes, and on the import and release of exotic biological agents. Phytosanitary regulations in the European Union (EU) have been harmonised and up to now have regulated about 300 plant pests. The requirements also have a protective horizontal effect against the unintentional introduction of many other species, but the existing broader IPPC mandate for alien plant pests is not fully applied by the EU regulations. This revised version was published online in July 2006 with corrections to the Cover Date.     

Bayesian case influence diagnostics for survival models

We propose Bayesian case influence diagnostics for complex survival models. We develop case deletion influence diagnostics for both the joint and marginal posterior distributions based on the Kullback-Leibler divergence (K-L divergence). We present a simplified expression for computing the K-L divergence between the posterior with the full data and the posterior based on single case deletion, as well as investigate its relationships to the conditional predictive ordinate. All the computations for the proposed diagnostic measures can be easily done using Markov chain Monte Carlo samples from the full data posterior distribution. We consider the Cox model with a gamma process prior on the cumulative baseline hazard. We also present a theoretical relationship between our case-deletion diagnostics and diagnostics based on Cox's partial likelihood. A simulated data example and two real data examples are given to demonstrate the methodology.