Human pluripotent stem cells identify molecular targets of trisomy 12 in chronic lymphocytic leukemia patients

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Broadening the Genetic Base of Soybean: A Multidisciplinary Approach

Soybean [Glycine max (L.) Merr.] is an economically important legume with 2n = 40 chromosomes, whose seeds contain an average of 40% protein and 20% oil, and its plants enrich the soil by fixing nitrogen in symbiosis with nitrogen-fixing bacteria. World soybean production has doubled in the past twenty years to over 220 million metric tons in 2006; the producing countries are U.S.A., Brazil, Argentina, China, and India. Soybean was domesticated in East Asia from its wild annual progenitor G. soja Sieb. & Zucc. (2n = 40). There are 26 wild perennial species, indigenous to Australia, of the subgenus Glycine but a common progenitor with 2n = 20 chromosomes has not been identified, and it may be extinct. It has been demonstrated that Glycine species are of either of allo-or auto-tetraploid origin. The cytogenetic knowledge of soybean lags far behind that of other model important crops (rice, maize, wheat, tomato), because it's somatic chromosomes are symmetrical, and only one pair of satellite chromosomes can be identified. Pachytene chromosome analysis created a chromosome map that has laid the foundation for producing primary trisomics. Several molecular linkage maps have been developed, but only 11 of the 20 molecular linkage groups (MLGs) have been associated with specific chromosomes. The genetic base of modern soybean cultivars is narrow and soybean breeders are confined to crossing within the primary gene pool (GP-1). Soybean does not have secondary gene pool (GP-2). Exploitation of the tertiary and quaternary gene pools (GP-3, GP-4) has been attempted but ended at the amphidiploid stage. A methodology for producing fertile lines derived from G. max and G. tomentella (2n = 78) cross has been developed, thereby making introgression of useful genes from GP-3. Genetic transformation has produced Roundup Ready® Soybeans, resistant to glyphosate herbicide.     

Taxonomy of squirrel monkeys genus Saimiri (cebidae,platyrrhini): A preliminary report with description of a hitherto unnamed form

Two groups of squirrel monkeys, genus Saimiri, are distinguished by external characters. The first, or Roman type, contains Saimiri boliviensis of upper Amazonia south of the Rio Marañón-Amazonas, with two subspecies of which S. boliviensis peruviensis is described as new. The second group, or Gothic type, contains three species: Saimiri sciureus with four subspecies distributed over much of tropical South America, Saimiri ustus of Brazil between the south bank Amazonian Rios Purús and Xingu, and S. oerstedi isolated on a Pacific coastal area straddling Costa Rica and Panamá. The geographic range of S. sciureus overlaps parts of those of S. ustus and S. boliviensis. Incomplete karyotypic data indicate that the diploid number of chromosomes for the genus is 44. Geographic variation is characterized by reduction from seven to six or five paired acrocentric autosomes through pericentric inversion with reciprocal increase in number of paired submetacentric or subtelocentric autosomes. Geographic distribution, behavior, sexual dimorphism including dichromatism, and hybridization are discussed. Ventral guide hairs for orientation of subprecocial newborn toward the maternal mammae are described. Distinguishing characters of species and subspecies are provided in a key. The taxons are listed with the taxonomy of each discussed, their geographic distribution plotted and mapped.     

Species delimitation in Neotropical fishes of the genus Characidium (Teleostei,Characiformes)

Neotropical darters of the genus Characidium have a complex systematic history with several examples of sympatry throughout their distribution range in Neotropical freshwaters. Although various species within the genus have been used as models to investigate chromosomal evolution and biogeography, species boundaries and relationships still remain uncertain. Here, we use mitochondrial DNA sequences to perform species delimitation analyses within Characidium and test previous hypotheses of species richness within the Characidium zebra complex and among sympatric morphotypes of C. alipioi. Results indicate high genetic distances within tested species complexes and revealed the presence of strongly supported lineages such as the large C. lauroi group from southeastern Brazil. This suggests that the evolutionary history of these groups may be correlated with biogeographic history. Analyses also reveal that three geographically isolated populations of C. zebra represent a single species, leading us to reject prior hypothesis of multiple species. Species delimitation using mitochondrial data strongly supports the presence of two sympatric species within C. alipioi in southeastern Brazil despite limited morphological variation and conserved chromosomal patterns. These results provide a framework to further the study of systematics and evolution within Characidium.     

Hermaphroditism in Meloidogyne hapla

Hermaphrodites were detected in diploid and polyploid isolates of population 86-Va of Meloidogyne hapla. Young hermaphrodites are indistinguishable from normal females. Initially, hermaphrodite ovaries are filled with oocytes at various stages of development. Hermaphroditism is expressed later when young oocytes in the early pachytene region of the growth zone suddenly advance to diakinesis and proceed with maturation divisions, resulting in spermatid production. Spermatogenesis may be initiated shortly after the fourth molt, or later, after a female has produced some eggs. Spermatogenesis may occur in one or both gonads, and it may be initiated in one gonad before the other. Once initiated, spermatogenesis continues for the entire reproductive life of the hermaphrodite. Several thousand spermatozoa accumulate in the ovotestis. Because they do not pass through the oviduct into the spermatotheca, they do not take part in reproduction (nonfunctional hermaphroditism). Among the progeny of hermaphrodites, ca. 50% are hermaphroditic, and the remainder are apparently normal females which, however, produce about 50% hermaphroditic progeny. Two temperature regimes (20-23 C and 27-30 C) did not influence the percentage of hermaphrodites among the progeny. Hermaphroditism could not be transmitted to nonhermaphroditic isolates following attempted crosses between males of hermaphroditic and females of nonhermaphroditic isolates. Although this result suggests cytoplasmic rather than nuclear inheritance, this conclusion is not definitive.     

Morphological and chromosomal descriptions of new species in the Anopheles subpictus complex

Abstract. Anopheles subpictus Grassi is shown to comprise four reproductively distinct species, designated A, B, C and D, occurring sympatrically in villages of Pondicherry, southeast India.
Adult females were reared individually from wild larvae and examined for their morphological and chromosomal characters. Paracentric fixed inversions on the X-chromosome serve to distinguish the species cytogenetically, with no inversion heterozygotes (i.e. no interspecific hybrids) among totals of 717 species A (X+^a,+^b), 1863 species B (Xa, b), 869 species C (Xa,+^b) and 1365 species D (X +^a,b) identified.
Morphologically, diagnostic characters for each of the four species are seen in the egg float ridge number, larval mesothoracic seta 4, pupal seta 7-1 and the palpi of female adults. Species A. C and D immatures inhabit freshwater, whereas the malaria vector species B breeds in saltwater and was found only in coastal villages.     

Specific Features of Phenotypic Expression of Autosomal Monosomies during Pathological Postimplantation Development of Man

Autosomal monosomies represent a severe form of genomic disbalance which determines elimination of human embryos already at the preimplantation stages. As a rule, they occur very rarely in the materials of spontaneously aborted embryos and fetuses. Molecular-cytogenetic studies were carried out on the karyotype of cells of 60 spontaneous abortuses of I trimester of pregnancy with cell degeneration or absence of cell proliferation in the cultures, as a result of which the cells could not be studied using the standard metaphase analysis. The embryos were characterized by an unexpectedly high frequency of mosaic variants of monosomies for chromosomes 7, 15, 21, and 22, which amounted to 19% of all chromosome aberrations. Lethal forms of monosomies for human chromosomes 7 and 15 were described for the first time, since they are not found in spontaneous abortuses by standard cytogenetic methods. A hypothesis was proposed which accounts for the possibility of early postimplantation lethality of the embryos with mosaic forms of autosomal monosomies. The differences were found between the cells with monosomies for different autosomes in the mechanisms of origin, intertissue localization, and phenotypic effects. It was shown that monosomies for chromosomes 7, 15, 21, and 22 in a mosaic state with the normal cell line can be compatible with the early stages of postimplantation differentiation of the cytotrophoblast. Predominant compartmentalization of the cells with monosomies for chromosomes 21 and 22 in the extraembryonic mesoderm, a derivative of epiblast, can be a critical factor, which makes the normal morphogenesis of embryonic structures impossible.     

DNA Probe Pooling for Rapid Delineation of Chromosomal Breakpoints

Structural chromosome aberrations are hallmarks of many human genetic diseases. The precise mapping of translocation breakpoints in tumors is important for identification of genes with altered levels of expression, prediction of tumor progression, therapy response, or length of disease-free survival, as well as the preparation of probes for detection of tumor cells in peripheral blood. Similarly, in vitro fertilization (IVF) and preimplantation genetic diagnosis (PGD) for carriers of balanced, reciprocal translocations benefit from accurate breakpoint maps in the preparation of patient-specific DNA probes followed by a selection of normal or balanced oocytes or embryos. We expedited the process of breakpoint mapping and preparation of case-specific probes by utilizing physically mapped bacterial artificial chromosome clones. Historically, breakpoint mapping is based on the definition of the smallest interval between proximal and distal probes. Thus, many of the DNA probes prepared for multiclone and multicolor mapping experiments do not generate additional information. Our pooling protocol, described here with examples from thyroid cancer research and PGD, accelerates the delineation of translocation breakpoints without sacrificing resolution. The turnaround time from clone selection to mapping results using tumor or IVF patient samples can be as short as 3 to 4 days. (J Histochem Cytochem 57:587–597, 2009)     

From Diploids to Allopolyploids: The Emergence of Efficient Pairing Control Genes in Plants

Polyploidy has played a major role in the evolution of higher plants. Precise control of chromosome pairing is vital for conferring meiotic regularity, and hence reproductive stability in allopolyploids. In this review, we examine whether strong evidence has accumulated for the presence and activity of pairing control genes in different allopolyploid species that are entirely bivalent forming and that display a strict disomic inheritance. We show that very good evidence has been adduced in Triticum species, Avena sativa, Festuca arundinacea, Brassica napus, Gossypium hirsutum, and G. barbadense, and in amphidiploids related to the diploid species Lolium perenne, L. multiflorum, and L. rigidum. More circumstantial evidence has been obtained for polyploids in the genera Aegilops, Hordeum, Nicotiana, and Coffea, which have received far less attention than the other species. Although these pairing regulators seem to control different processes operating throughout the premeiotic interphase and the meiotic prophase, little is known about their precise mode of action. We present three hypotheses that have been proposed to explain the origin and evolution of pairing control genes; none of them has been supported by direct evidence, and the origin of most pairing suppressors is still unknown. Accordingly, the study of pairing control genes is still an important task for understanding the stabilization and establishment of allopolyploid species.     

Chromosome mapping of ribosomal genes and histone H4 in the genus Radacridium (Romaleidae)

In this study, two species of Romaleidae grasshoppers, Radacridium mariajoseae and R.nordestinum, were analyzed after CMA₃/DA/DAPI sequential staining and fluorescence in situ hybridization (FISH) to determine the location of the 18S and 5S rDNA and histone H4 genes. Both species presented karyotypes composed of 2n = 23, X0 with exclusively acrocentric chromosomes. CMA₃⁺ blocks were detected after CMA₃/DA/DAPI staining in only one medium size autosome bivalent and in the X chromosome in R. mariajoseae. On the other hand, all chromosomes, except the L1 bivalent, of R. nordestinum presented CMA₃⁺ blocks. FISH analysis showed that the 18S genes are restricted to the X chromosome in R. mariajoseae, whereas these genes were located in the L₂, S₉ and S₁₀ autosomes in R. nordestinum. In R. mariajoseae, the 5S rDNA sites were localized in the in L₁ and L₂ bivalents and in the X chromosome. In R. nordestinum, the 5S genes were located in the L₂, L₃, M₄ and M₅ pairs. In both species the histone H4 genes were present in a medium size bivalent. Together, these data evidence a great variability of chromosome markers and show that the 18S and 5S ribosomal genes are dispersed in the Radacridium genome without a significant correlation.