Fine-mapping of a marbling trait to a 2.9-cM region on bovine chromosome 7 in Japanese Black cattle

To locate quantitative trait loci (QTL) for intramuscular fat deposition (marbling) in a local population of Japanese Black cattle, we performed a genome scan using a paternal half-sib family of Bull A. A marbling QTL was mapped in the region flanked by DIK0079 (20.7 cM) and TGLA303 (39.3 cM) on bovine chromosome (BTA) 7, affecting 5.0% of the total family variance. Haplotype analysis of the QTL region revealed that the marbling-increasing Q allele was transmitted from the dam. On the other hand, Bull B, a maternal half-sib of Bull A, did not receive the Q allele from its dam, based on the following findings: (i) a marbling QTL on BTA7 was not detected in the Bull B paternal half-sib family; (ii) recombination between DIK0079 (20.7 cM) and RM006 (25.4 cM) in the QTL region was observed in the maternal chromosome of Bull B; and (iii) the Q -harbouring steers from Bull A exhibited significantly higher marbling than the steers from Bull B and the remaining steers from Bull A. To precisely compare the maternal chromosomes of both bulls, we constructed a bacterial artificial chromosome contig covering the region between DIK0079 and RM006 and developed DNA markers. The recombination occurred between DIK8042 and DIK8044 , indicating that the marbling QTL was in a 2.9-cM region flanked by DIK0079 and DIK8044 .     

Premating isolation is determined by larval rearing substrates in cactophilic Drosophila mojavensis. VIII. Mating success mediated by epicuticular hydrocarbons within and between isolated populations

We tested the hypothesis that intrademic sexual selection has caused sexual isolation between populations of geographically isolated populations of cactophilic Drosophila mojavensis, and was mediated by epicuticular hydrocarbons (EHCs), contact pheromones in this system. Sexual selection and sexual isolation were estimated using a Baja California and mainland population by comparing the number of mated and unmated males and females in each of four pairwise population mating trials. EHC profiles were significantly different in mated and unmated males in the interdemic (Bajafemale symbol x Mainlandmale symbol and Mainlandfemale symbol x Bajamale symbol), but not the intrademic mating trials. A small number of EHCs was identified that best discriminated among mated and unmated males, mostly alkadienes with 34 and 37 carbons. Females showed population-specific preferences for male EHC profiles. However, EHC profiles between mated and unmated males in the intrademic mating trials were not significantly different, consistent with undetectable sexual selection estimated directly from numbers of copulating pairs vs. unmated adults. Thus, sexual isolation among populations was much stronger than sexual selection within these populations of D. mojavensis.     

The use of modelling and simulation approach in reconstructing past landscapes from fossil pollen data: a review and results from the POLLANDCAL network

Information on past land cover in terms of absolute areas of different landscape units (forest, open land, pasture land, cultivated land, etc.) at local to regional scales is needed to test hypotheses and answer questions related to climate change (e.g. feedbacks effects of land-cover change), archaeological research, and nature conservancy (e.g. management strategy). The palaeoecological technique best suited to achieve quantitative reconstruction of past vegetation is pollen analysis. A simulation approach developed by Sugita (the computer model POLLSCAPE) which uses models based on the theory of pollen analysis is presented together with examples of application. POLLSCAPE has been adopted as the central tool for POLLANDCAL (POLlen/LANdscape CALibration), an international research network focusing on this topic. The theory behind models of the pollen–vegetation relationship and POLLSCAPE is reviewed. The two model outputs which receive greatest attention in this paper are the relevant source area of pollen (RSAP) and pollen loading in mires and lakes. Six examples of application of POLLSCAPE are presented, each of which explores a possible use of the POLLANDCAL tools and a means of validating or evaluating the models with empirical data. The landscape and vegetation factors influencing the size of the RSAP, the importance of pollen productivity estimates (PPEs) for the model outputs, the detection of small and rare patches of plant taxa in pollen records, and quantitative reconstructions of past vegetation and landscapes are discussed on the basis of these examples. The simulation approach is seen to be useful both for exploring different vegetation/landscape scenarios and for refuting hypotheses.     

Influences of insecticides on toxicity and cuticular penetration of abamectin in Helicoverpa armigera

Synergistic actions for mixtures of abamectin with other insecticides in some insect pests were evaluated, and the possible synergistic mechanism was studied by the comparison in toxicity and cuticular penetration of abamectin between with and without other insecticides or synergists in Helicoverpa armigera larvae. The results of bioassay showed that horticultural mineral oil (HMO), hexaflumuron, chlorpyrifos, and some other insecticides were synergistic to abamectin with 152.0-420.0 of co-toxicity coefficient(CTC) in some agricultural insect pests. In topical application tests, HMO or piperonyl butoxide (PBO) increased the toxicity of abamectin in larvae of H. armigera, but the mortality was not affected by s,s,s-tributylphorotrithioate (DEF) and triphenylphosphate (TPP). The synergistic action of HMO was obviously higher than PBO, and when treated simultaneously with abamectin, HMO gave a more significant synergism than if treated 2 hours ahead. The highest synergistic effect (SE) was found in the mixture of ‘abamectin HMO (1:206)‘. The mortality did not increase or the toxicity drop, when a synergist or HMO was added into the mixture of ‘abamectin HMO‘ or ‘abamectin synergist‘, respectively. Results from the isotope tracing experiments showed that HMO significantly enhanced the penetration of ^3H-abamectin through the cuticle of H.armigera larvae, which resulted in the synergism of the mixture. The cuticular penetration of ^3H-abamectin was not accumulatively affected by chlorpyrifos, nor by hexaflumuron,though there was an inhibition within 30 seconds or 1 hour after treated by these two chemicals respectively. Results suggested that the synergism of abamectin mixed with hexaflumuron or chlorpyrifos might be related to inhibition of metabolic enzymes or target sites in the larvae.     

Anthropogenic N deposition and the fate of 15NO 3 − in a northern hardwood ecosystem

Human activity has substantially increased atmospheric NO ₃ ^– deposition in many regions of the Earth, which could lead to the N saturation of terrestrial ecosystems. Sugar maple (Acer saccharum Marsh.) dominated northern hardwood forests in the Upper Great Lakes region may be particularly sensitive to chronic NO ₃ ^– deposition, because relatively moderate experimental increases (three times ambient) have resulted in substantial N leaching over a relatively short duration (5–7 years). Although microbial immobilization is an initial sink (i.e., within 1–2 days) for anthropogenic NO ₃ ^– in this ecosystem, we have an incomplete understanding of the processes controlling the longer-term (i.e., after 1 year) retention and flow of anthropogenic N. Our objectives were to determine: (i) whether chronic NO ₃ ^– additions have altered the N content of major ecosystem pools, and (ii) the longer-term fate of ¹⁵NO ₃ ^– in plots receiving chronic NO ₃ ^– addition. We addressed these objectives using a field experiment in which three northern hardwood plots receive ambient atmospheric N deposition (ca. 0.9 g N m^–2 year^–1) and three plots which receive ambient plus experimental N deposition (3.0 g NO₃ ^–-N m^–2 year^–1). Chronic NO ₃ ^– deposition significantly increased the N concentration and content (g N/m²) of canopy leaves, which contained 72% more N than the control treatment. However, chronic NO ₃ ^– deposition did not significantly alter the biomass, N concentration or N content of any other ecosystem pool. The largest portion of ¹⁵N recovered after 1 year occurred in overstory leaves and branches (10%). In contrast, we recovered virtually none of the isotope in soil organic matter (SOM), indicating that SOM was not a sink for anthropogenic NO ₃ ^– over a 1 year duration. Our results indicate that anthropogenic NO ₃ ^– initially assimilated by the microbial community is released into soil solution where it is subsequently taken up by overstory trees and allocated to the canopy. Anthropogenic N appears to be incorporated into SOM only after it is returned to the forest floor and soil via leaf litter fall. Short- and long-term isotope tracing studies provided very different results and illustrate the need to understand the physiological processes controlling the flow of anthropogenic N in terrestrial ecosystems and the specific time steps over which they operate.     

Modeling preindustrial ANC and pH during the spring flood in northern Sweden

The natural preindustrial ANC and pH decline associated with 22 melt events from 11 streams during spring flood of 1997 and 1998 in Northern Sweden have been assessed using the Boreal Dilution Model (BDM). The results show that the spring flood pH decline of 0.5 to 2.5 pH units in the streams was largely caused by natural processes. The most important driving factors influencing pH were TOC increase in combination with ANC dilution. The study also demonstrates that pH in some streams can decline to pH values close to 4.5 as a result of natural processes alone. In general the anthropogenic component of the pH decline was between 0.1 and 0.3 pH units superimposed on the natural pH decline. Furthermore, the anthropogenic contribution to ANC and pH decline generally followed the gradient of anthropogenic S deposition in the region. The sites with the greatest inferred anthropogenic influence are also those for which the assumptions used in the BDM were most sensitive. Nevertheless, the results from this study suggest that the regional impact of anthropogenic acid deposition on the ANC and pH in northern Sweden is currently limited.     

Contemporary transport of suspended material and its deposition in the Vistula River,Poland

The rate of suspended material transported with the current and its deposition in the Vistula River and its main tributaries was estimated to determine the effects of river regulation in the following periods: (1) between the beginning of engineering works on the Vistula River and the construction of the first dams on its tributaries, (2) in the years 1946-1995 when transport measurements were taken, (3) after the planned completion of the dam system. Those estimates were based on the results of long-term measurements of the rivers, carried out by the State Hydrological Survey at numerous gauging stations, as well as on analysis of maps published after 1780. The combined methods allowed estimating both the differences in deposition of the suspended material along the river and the long-term variability of that process. The initial increase in transport and deposition of the suspended material in the Vistula River during the four decades succeeding the river regulation (1890s–1930s) was followed by a rapid decrease of the material transport caused by the construction of dams and changes in land-use in the river basin.     

Acidic deposition, nutrient leaching and forest growth

Studies in Germany and confirmed in North America established that the forest decline that developed in the late 1970's and 80's resulted from a deficiency in one or more of the nutrient cations: Ca²⁺, Mg²⁺, and K⁺. These nutrients are essential to the structure of the foliage, to photosynthesis and to the growth of the trees. The reactions and mechanisms involved in the entry of nutrients to the soil, their storage, and rate of transfer to the soil solution, and through it, to the fine roots and to the leaves at the top of the tree are reviewed. The continuing material balance studies carried out on a watershed at the Hubbard Brook Experimental Forest in New Hampshire allow a unique analysis of the changes caused in these nutrient transfers by acid rain. The nutrient cations are stored in the soil by adsorption on negatively charged clay, and the presence of an acid is required for their release to the soil solution. In pre-industrial times this acid was H₂CO₃, which was subsequently displaced from the soil solution by H₂SO₄ and HNO₃, as a result of acid deposition. The effect of the increased concentration of the negatively charged SO₄ ^2– and NO₃ ^– anions seeping through the soil, compared with that of the HCO₃ ^– that had been previously present, resulted in a substantially increased rate of transfer of an equivalent of Ca²⁺ and other positively charged nutrient cations from the soil to the soil solution. The increased concentration of Ca²⁺ in the soil solution resulted in both an initial increase in the rate of biomass growth and in a simultaneous increase in the rate of Ca²⁺ loss in the effluent soil solution from the watershed. It was found that this increased rate of removal of Ca²⁺ from the watershed soil had become greater than its rate of input to the soil from weathering and from dust and rain. As a result, the large Ca²⁺ inventory that had built up in the soil as a result of the reduced leaching in the years prior to the entry of acid rain, that started in about the1880's, was eventually depleted in the hardwood forest at Hubbard Brook in the 1980's, about 100 years later. With insufficient Ca²⁺ available for its continuing transfer, net biomass growth on the watershed stopped. This resulted from the rate of tree mortality becoming equal to that of the small incremental growth of a few trees on the watershed. The future growth of forests is at risk from the long-term effects of acid deposition. The fundamental nature of the reactions involved indicates that similar growth anomalies are occurring in other forests impacted by acid rain. These changes from normal biomass growth can affect the amount of CO₂ stored in the biomass, of importance to our understanding of Global Warming.     

Effect of experimental nitrogen load on methane and nitrous oxide fluxes on ombrotrophic boreal peatland

Methane (CH₄) and nitrous oxide (N₂O) dynamics were studied in a boreal Sphagnum fuscum pine bog receiving annually (from 1991 to 1996) 30 or 100 kg NH₄NO₃-N ha^–1. The gas emissions were measured during the last three growing seasons of the experiment. Nitrogen treatment did not affect the CH₄ fluxes in the microsites where S. fuscum and S. angustifolium dominated. However, addition of 100 kg NH₄NO₃-N ha^–1 yr^–1 increased the CH₄ emission from those microsites dominated by S. fuscum. This increase was associated with the increase in coverage of cotton grass (Eriophorum vaginatum) induced by the nitrogen treatment. The differences in the CH₄ emissions were not related to the CH₄ oxidation and production potentials in the peat profiles. The N₂O fluxes were negligible from all microsites. Only minor short-term increases occurred after the nitrogen addition.