Conformational control of spin state in iron(II) tripodal imidazole complexes

Three new iron(II) N₆ tripodal complexes provide information on the role of ligand conformation on spin crossover behavior. The ligands (generated in situ) are the Schiff base condensate of tris(2-aminoethyl)amine (tren) with three equivalents of 4-methyl-5-imidazolecarboxaldehyde, H₃(1), and the condensates of tris(2-aminoethyl)methylammonium ion (N(Me)tren⁺) with three equivalents of 4-methyl-5-imidazolecarboxaldehyde, N(Me)H₃(1)⁺, or with 2-imidazole carboxaldehyde, N(Me)H₃(3)⁺. The structures of [FeH₃(1)](ClO₄)₂, [FeN(Me)H₃(1)](ClO₄)₃ and [FeN(Me)H₃(1)](ClO₄)₃ are reported. The central tren nitrogen atom in these complexes exhibits three different geometries, pyramidal with the nitrogen pointed toward the iron (“N in”, Fe-N distance of 3.050 Å), planar (Fe-N distance of 3.527 Å), and pyramidal with the nitrogen pointed away from the iron atom (“N out”, Fe-N distance of 3.921 Å). With iron(II) the “N in” geometry is high spin while the planar and “N out” geometries are low spin. [FeH₃(1)](ClO₄)₂ exhibits spin crossover behavior between room temperature and 77 K as determined by Mössbauer spectroscopy and also exhibits a conformational change from “N in” to planar over this same temperature range. The structures of [FeN(Me)H₃(1)](ClO₄)₃ and [FeN(Me)H₃ (3)](ClO₄)₃ are locked into the “N out” geometry due to the quaternary nitrogen atom and are low spin even at room temperature. The LS planar and “N out” conformations place a strain on the bond angles of the aliphatic arms of the ligand, which are more pronounced in the “N out” case. The HS “N in” geometry lacks this strain.     

Comparative investigations on a series of [hexakis(1-(tetrazol-1-yl)alkane-N4)iron(II)] bis(tetrafluoroborate) spin crossover complexes: Methyl- to butyl-substituted species

A series of 1-(tetrazol-1-yl)alkanes [ntz] with n = 1-4 were synthesised as ligands for iron(II) spin crossover complexes. Within this series 1-(tetrazol-1-yl)butane [4tz] was prepared for the first time, whereas 1-(tetrazol-1-yl)methane [1tz], 1-(tetrazol-1-yl)ethane [2tz], 1-(tetrazol-1-yl)propane [3tz] and the [hexakis(ntz)iron(II)]bis(tetrafluoroborate) complexes were prepared according to the literature. Aiming for a comparative study we characterized all four compounds by XRPD, magnetic susceptibility measurements, ⁵⁷Fe-Moessbauer spectroscopy and IR spectroscopy. [Fe(4tz)₆](BF₄)₂ yielded appropriate single crystals and an X-ray structure of the new compound [Fe(4tz)₆](BF₄)₂ is presented. The magnetic and structural properties of all [Fe(ntz)₆](BF₄)₂ are compared and discussed.     

Differential Convergence of Life-Cycle Inventories toward Upstream Production Layers

We present an input-output analysis of the life-cycle labor, land, and greenhouse gas (GHG) requirements of alternative options for three case studies: investing money in a new vehicle versus in repairs of an existing vehicle (labor), passenger transport modes for a trip between Sydney and Melbourne (land use), and renewable electricity generation (GHG emissions). These case studies were chosen to demonstrate the possibility of rank crossovers in life-cycle inventory (LCI) results as system boundaries are expanded and upstream production inputs are taken into account. They demonstrate that differential convergence can cause crossovers in the ranking of inventories for alternative functional units occurring at second-and higher-order upstream production layers. These production layers are often excluded in conventional process-type life-cycle assessment (LCA) by the delineation of a finite system boundary, leading to a systematic truncation error within the LCI. The exclusion of higher-order upstream inputs can be responsible for ranking crossovers going unnoticed. In this case, an incomplete conventional process-type LCA of two alternative options can result in preferences and recommendations to decision makers that are different from preferences and recommendations concluded from a complete hybrid input-output-based assessment. Therefore, the need to avoid misleading effects on the ranking of alternative functional units due to differential convergence supports the practice of hybrid input-output-based LCA techniques.     

DNA sequence and shape are predictive for meiotic crossovers throughout the plant kingdom

A better understanding of genomic features influencing the location of meiotic crossovers (CO s) in plant species is both of fundamental importance and of practical relevance for plant breeding. Using CO positions with sufficiently high resolution from four plant species [Arabidopsis thaliana , Solanum lycopersicum (tomato), Zea mays (maize) and Oryza sativa (rice)] we have trained machine‐learning models to predict the susceptibility to CO formation. Our results show that CO occurrence within various plant genomes can be predicted by DNA sequence and shape features. Several features related to genome content and to genomic accessibility were consistently either positively or negatively related to CO s in all four species. Other features were found as predictive only in specific species. Gene annotation‐related features were especially predictive for maize, whereas in tomato and Arabidopsis propeller twist and helical twist (DNA shape features) and AT /TA dinucleotides were found to be the most important. In rice, high roll (another DNA shape feature) and low CA dinucleotide frequency in particular were found to be associated with CO occurrence. The accuracy of our models was sufficient for Arabidopsis and rice (area under receiver operating characteristic curve, AUROC  > 0.5), and was high for tomato and maize (AUROC  ? 0.5), demonstrating that DNA sequence and shape are predictive for meiotic CO s throughout the plant kingdom.     

Effect of different salt ions on the propensity of aggregation and on the structure of Alzheimer's abeta(1-40) amyloid fibrils

The formation of amyloid fibrils and other polypeptide aggregates depends strongly on the physico-chemical environment. One such factor affecting aggregation is the presence and concentration of salt ions. We have examined the effects of salt ions on the aggregation propensity of Alzheimer's Abeta(1-40) peptide and on the structure of the dissolved and of the fibrillar peptide. All salts examined promote aggregation strongly. The most pronounced effect is seen within the cationic series, i.e. for MgCl2. Evaluation of different possible explanations suggests that Abeta(1-40) aggregation depends on direct interaction between ions and Abeta(1-40) peptide, and correlates with ion-induced changes of the surface tension. Salts have profound effects on the fibril structure. In the presence of salts, fibrils are associated with smaller diameters, narrower crossover distances and lower amide I maxima. Since Abeta(1-40) aggregation responds to salts in a manner unlike that for other polypeptides, such as glucagon, beta2-microglobulin or alpha-synuclein; these data argue that there is no fully uniform way in which salts affect aggregation of different polypeptide chains. These observations are important for understanding and predicting aggregation on the basis of simple physico-chemical properties.     

The crystal structure of lambda-Gam protein suggests a model for RecBCD inhibition

In Escherichia coli, RecBCD processes double-stranded DNA breaks during the initial stages of homologous recombination. RecBCD contains helicase and nuclease activities, and unwinds and digests the blunt-ended DNA until a specific eight-nucleotide sequence, Chi, is encountered. Chi modulates the nuclease activity of RecBCD and results in a resected DNA end, which is a substrate for RecA during subsequent steps in recombination. RecBCD also acts as a defence mechanism against bacteriophage infection by digesting linear viral DNA present during virus replication or resulting from the action of restriction endonucleases. To avoid this fate, bacteriophage lambda encodes the gene Gam whose product is an inhibitor of RecBCD. Gam has been shown to bind to RecBCD and inhibit its helicase and nuclease activities. We show that Gam inhibits RecBCD by preventing it from binding DNA. We have solved the crystal structure of Gam from two different crystal forms. Using the published crystal structure of RecBCD in complex with DNA we suggest models for the molecular mechanism of Gam-mediated inhibition of RecBCD. We also propose that Gam could be a mimetic of single-stranded, and perhaps also double-stranded, DNA.     

Recombination suppression in heterozygotes for a pericentric inversion induces the interchromosomal effect on crossovers in Arabidopsis

During meiosis, recombination ensures allelic exchanges through crossovers (COs) between the homologous chromosomes. Advances in our understanding of the rules of COs have come from studies of mutations including structural chromosomal rearrangements that, when heterozygous, are known to impair COs in various organisms. In this work, we investigate the effect of a large heterozygous pericentric inversion on male and female recombination in Arabidopsis. The inversion was discovered in the Atmcc1 mutant background and was characterized through genetic and next‐generation sequencing analysis. Reciprocal backcross populations, each consisting of over 400 individuals, obtained from the mutant and the wild type, both crossed with Landsberg erecta, were analyzed genome‐wide by 143 single‐nucleotide polymorphisms. The negative impact of inversion became evident in terms of CO loss in the rearranged chromosome in both male and female meiosis. No single‐CO event was detected within the inversion, consistent with a post‐meiotic selection operating against unbalanced gametes. Cytological analysis of chiasmata in F₁ plants confirmed that COs were reduced in male meiosis in the chromosome with inversion. Crossover suppression on the rearranged chromosome is associated with a significant increase of COs in the other chromosomes, thereby maintaining unchanged the number of COs per cell. The CO pattern observed in our study is consistent with the interchromosomal (IC) effect as first described in Drosophila. In contrast to male meiosis, in female meiosis no IC effect is visible. This may be related to the greater strength of interference that constrains the CO number in excess of the minimum value imposed by CO assurance in Arabidopsis female meiosis.     

Two new Fe(II) spin crossover complexes with tetrazol-1-yl-cycloalkane ligands

Two new 1-(tetrazol-1-yl)cycloalkanes [C_ntz] with n = 5 and 6 were synthesised as ligands for iron(II) spin crossover complexes. Just recently, the [Fe(C₃tz)₆](BF₄)₂ showed that the rigid cyclopropyl-substituent of the tetrazole yielded a rather abrupt and complete spin transition at T_½ ≈ 190 K [1]. Aiming for a deeper insight into the factors governing the spin transition behavior such as abruptness and spin transition temperature we synthesized the two new homologous complexes [Fe(C₅tz)₆](BF₄)₂ and [Fe(C₆tz)₆](BF₄)₂ which were characterized by XRPD, magnetic susceptibility measurements, DSC, ⁵⁷Fe-Mössbauer, UV-Vis-NIR and MIR spectroscopy. The magnetic and structural properties of both [Fe(C_ntz)₆](BF₄)₂ with n = 5 and 6 are also compared with the [Fe(C₃tz)₆](BF₄)₂ and its structural peculiarities are discussed.     

A Note on the Analysis of the Two-Period Crossover Design When the Period-Treatment Interaction is Significant

In the analysis of a two-period crossover study Grizzle (1965) suggests that, if a preliminary test for a period by treatment interaction (residual effect, carryover effect) is significant at the 10 % level, the direct effects of the treatments should be compared by performing a t-test on the data from the first period only. In this note it is shown that under Grizzle's model the comparison of the direct treatment effects is equivalent to a Behrens-Fisher problem. Depending on one's viewpoint–Bayesian, fiducial, or sampling theory–different solutions are possible. The solutions are illustrated using three well-known data sets.