Coyote capture vulnerability relative to space use and trap density

Coyotes (Canis latrans) are reported to be less vulnerable to capture in familiar areas of territories, however, most studies do not control for trap density across the territory. We determined if accounting for trap density provided a better explanation of observed capture rates. Based on a sample of 24 captured coyotes (6 inside core areas and 18 on peripheries of occupied areas) the best fitting model describing capture location only accounted for trap density and not relative time spent in each region. Our results suggest that coyote capture rates are a function of trap density in an area and not novelty avoidance. Placing traps in core areas of territories can increase the probability of capturing individuals from specific territories to increase the effectiveness of management or research activities. © 2011 The Wildlife Society.     

Effects of Habitat on Competition Between Kit Foxes and Coyotes

Abstract: San Joaquin kit foxes (Vulpes macrotis mutica) are an endangered species with a narrow geographic range whose natural populations are limited by predation by coyotes (Canis latrans). In the warm, arid grassland and shrubland habitats where kit foxes occur, coyotes are more cover dependent than kit foxes, creating the possibility of habitat segregation. Effects of habitat variation on coyote and kit fox competition are unknown. We assessed exploitation and interference competition between coyotes and kit foxes in grassland and shrubland habitats to determine if such competition varies among habitats. With respect to exploitation competition, we evaluated habitat and spatial partitioning, diet, prey abundance, and survival for kit foxes and coyotes at the Lokern Natural Area in central California, USA, from January 2003 through June 2004. Kit foxes partitioned habitat, space, and diet with coyotes. Coyotes primarily used shrubland habitats whereas kit foxes selectively used burned grasslands. Kit foxes and coyotes had high dietary overlap with regards to items used, but proportional use of items differed between the 2 species. Kit foxes selected for Heermann's kangaroo rats (Dipodomys heermanni), which were closely tied to shrub habitats. With respect to interference competition, predation was the primary source of mortality for kit foxes, and survival of individual kit foxes was inversely related to proportion of shrub habitat within their home ranges. Our results suggest that a heterogeneous landscape may benefit kit foxes by providing habitat patches where predation risk may be lower.     

Evaluation of fecal DNA preservation techniques and effects of sample age and diet on genotyping success

Optimal collection and preservation protocols for fecal DNA genotyping are not firmly established. We evaluated 3 factors that influence microsatellite genotyping success of fecal DNA extracted from coyote (Canis latrans) scats: 1) age of scat, 2) preservative, and 3) diet content. We quantified genotyping success by comparing rates of allelic dropout, false alleles, and failed amplifications among consensus genotypes. We used a panel of 6 microsatellite loci to genotype 20 scat samples, each of which was subjected to 3 age (1 day, 5 days, and 10 days post-deposition) and 3 preservation (DET buffer, 95% ethanol [EtOH], and lysis buffer) treatments. Both sample age and storage buffer had a significant effect on success and reliability. Ethanol and DET buffer preserved fecal samples with similar efficiency, and both were superior to lysis buffer. Our analysis of DNA degradation rates revealed that samples collected as early as 5 days of age yielded DNA that was highly degraded relative to samples collected on day 1. We tested the influence of dietary remains on microsatellite genotyping by using scat samples consisting predominantly of insect prey (n = 5), mammalian prey (n = 9), or the remains of juniper (Juniperus spp.) berries (n = 6) and compared EtOH and DET buffer preservation efficacy. We observed a significant interaction effect between storage buffer and diet for the probability of a false allele in a polymerase chain reaction (PCR), suggesting that the optimal preservation technique depended on the food remains comprising the scat. Scats comprised of juniper berry remains were more reliably genotyped when preserved in DET than EtOH. Mammalian prey-based scats were more reliable when stored in EtOH than DET buffer. Insect-predominant scats were preserved in EtOH and DET buffer with similar efficiency. Although accurate and reliable results can be obtained from scats collected at ≥5 days of age, we suggest sampling design to include collection of scats <5 days of age to minimize field and laboratory expenses. We suggest EtOH preservation for scats of obligate carnivores and of facultative carnivores with a diet consisting primarily of mammals. We suggest DET buffer preservation for animals with a diet consisting of plant-derived foods. Lysis buffer protocols that we employed should not be used for fecal DNA preservation. © 2011 The Wildlife Society.     

Survival of Neonatal White-Tailed Deer in an Exurban Population

Abstract: As humans continue to move further from the urban epicenter and expand into suburban and exurban areas, problems involving coexistence of wildlife and human populations will become increasingly common. Wildlife biologists will be tasked with reducing wildlife-human conflicts, and their effectiveness will be a function of their understanding of the biology and life-history characteristics of wildlife populations residing in areas with high human density. In this study, we examined causes and timing of deaths of neonatal white-tailed deer (Odocoileus virginianus) in an exurban area of Alabama in 2004 and 2005, estimated survival rates, and determined factors that influenced survival for the initial 8 weeks of life. We found 67% mortality, with the leading causes being predation by coyotes (Canis latrans; 41.7%)and starvation due to abandonment (25%). These results suggest that coyote predation may be a significant source of natural mortality in exurban areas. Contrary to our original expectations, vehicle collisions were not an important cause of mortality.     

Coyote and porcupine spread Russian olive seeds through endozoochory

Russian olive (Elaeagnus angustifolia) is an invasive tree that has spread throughout much of the western United States. The mode of seed dispersal occurs by hydrochory and possibly by birds. Seed dispersal by frugivorous mammals has not been investigated. Between 15 October and 4 November 2020, we walked through Russian olive windbreaks in western North Dakota, USA, and surveyed for mammal scat, and found 10 coyote (Canis latrans) and 54 porcupine (Erethizon dorsatum) scats that contained intact Russian olive seeds. We subsequently evaluated the viability, germination frequency, and time to germination of seeds ingested by coyote and porcupine relative to un-ingested control seeds harvested from trees at sites where we collected scat. Overall, Russian olive seeds that passed through mammal intestinal tracts had similar viability and equivalent (porcupine) or higher (coyote) germination frequency compared to controls. Additionally, coyote-ingested seeds germinated earlier (time to germination was low) than controls, but porcupine-ingested seeds were similar to controls. Thus, our data supports the idea that mammals may be agents of regional Russian olive seed dispersal.     

Cats and dogs: A mesopredator navigating risk and reward provisioned by an apex predator

Successfully perceiving risk and reward is fundamental to the fitness of an animal, and can be achieved through a variety of perception tactics. For example, mesopredators may “directly” perceive risk by visually observing apex predators, or may “indirectly” perceive risk by observing habitats used by predators. Direct assessments should more accurately characterize the arrangement of risk and reward; however, indirect assessments are used more frequently in studies concerning the response of GPS‐marked animals to spatiotemporally variable sources of risk and reward. We investigated the response of a mesopredator to the presence of risk and reward created by an apex predator, where risk and reward likely vary in relative perceptibility (i.e., degree of being perceptible). First, we tested whether coyotes (Canis latrans) use direct or indirect assessments to navigate the presence of mountain lions (Puma concolor; risk) and kills made by mountain lions (reward) in an area where coyotes were a common prey item for mountain lions. Second, we assessed the behavioral response of coyotes to direct encounters with mountain lions. Third, we evaluated spatiotemporal use of carrion by coyotes at kills made by mountain lions. Indirect assessments generally outperformed direct assessments when integrating analyses into a unified framework; nevertheless, our ability to detect direct perception in navigating to mountain lion kills was likely restricted by scale and sampling limitations (e.g., collar fix rates, unsampled kill sites). Rather than responding to the risk of direct encounters with mountain lions, coyotes facilitated encounters by increasing their movement rate, and engaged in risky behavior by scavenging at mountain lion kills. Coyotes appear to mitigate risk by using indirect perception to avoid mountain lions. Our predator–predator interactions and insights are nuanced and counter to the conventional predator–prey systems that have generated much of the predation risk literature.     

Mitochondrial DNA phylogeography and population history of the grey wolf canis lupus

The grey wolf (Canis lupus) and coyote (C. latrans) are highly mobile carnivores that disperse over great distances in search of territories and mates. Previous genetic studies have shown little geographical structure in either species. However, population genetic structure is also influenced by past isolation events and population fluctuations during glacial periods. In this study, control region sequence data from a worldwide sample of grey wolves and a more limited sample of coyotes were analysed. The results suggest that fluctuating population sizes during the late Pleistocene have left a genetic signature on levels of variation in both species. Genealogical measures of nucleotide diversity suggest that historical population sizes were much larger in both species and grey wolves were more numerous than coyotes. Currently, about 300 000 wolves and 7 million coyotes exist. In grey wolves, genetic diversity is greater than that predicted from census population size, reflecting recent historical population declines. By contrast, nucleotide diversity in coyotes is smaller than that predicted by census population size, reflecting a recent population expansion following the extirpation of wolves from much of North America. Both species show little partitioning of haplotypes on continental or regional scales. However, a statistical parsimony analysis indicates local genetic structure that suggests recent restricted gene flow.     

Urban coyotes select cryptic den sites near human development where conflict rates increase

The establishment of coyote (Canis latrans) populations in urban areas across North America has been accompanied by increased rates of human–coyote conflict. One factor thought to promote physical conflict between coyotes and people or pets is the presence of coyote pups near natal dens; however, this idea has not been tested, and no multivariate study of den selection within cities has occurred. Our objectives were to conduct a multivariate analysis of third- (i.e., home range) and fourth-order (i.e., den sites) habitat selection at dens and determine whether proximity to dens is associated with reports of physical conflict with coyotes. We found 120 dens by following coyote trails using snow tracking within urban green spaces that comprise presumed high-quality habitat for coyotes in Edmonton, Alberta, Canada. We used resource selection functions to assess habitat selection for dens, testing variables related to land cover and anthropogenic features at the third order, and testing microsite habitat features via paired sites at the fourth order. We defined conflict encounters from comments in a community reporting database and used general linear models to assess their spatial proximity to the nearest den and prevalence during the pup-rearing period compared to the rest of the year. Habitat selection was strongest at the fourth order, wherein coyotes selected for abundant hiding cover, steep slopes, and eastern exposure. The prevalence of physical conflict with coyotes increased during the pup-rearing period. Conflict also increased near known dens as an overall effect and when reports occurred outside of naturalized urban areas. These results suggest that coyotes in Edmonton den in green spaces near human development in microsites that minimize detection by people via steep slopes and dense vegetation. We suggest urban wildlife managers increase public safety education about recognition of coyote denning habitat and coyote defensive behaviors, especially outside of naturalized urban areas, because of the observed increase in physical conflict near dens.