3A蛋白104–115位氨基酸缺失口蹄疫A型标记病毒的构建

【目的】构建一株含3A非结构蛋白104–115位氨基酸缺失的口蹄疫A型标记病毒,分析其生物学特性和发展标记疫苗的潜力。【方法】采用融合PCR技术,在当前流行毒株A/Sea-97/CHA/2014全长感染性克隆p QAHN中引入3A104–115位氨基酸的缺失,构建全长重组质粒。全长质粒经NotI线化后转染表达T7RNA聚合酶的稳定细胞系,拯救标记病毒。RT-PCR、序列分析、间接免疫荧光和Western blotting鉴定标记病毒。噬斑表型和一步生长曲线分析标记病毒的生物学特性,并用实验室开发的针对3A优势表位(AEKNPLE)的阻断ELISA方法分析其区分亲本和标记病毒感染的动物。【结果】成功拯救到一株含3A 104–115位氨基酸缺失的口蹄疫A型标记病毒,3A表位的缺失没有影响标记病毒的噬斑表型和一步生长曲线。3A单抗阻断ELISA可以明显区分标记病毒和亲本病毒感染的动物。【结论】本研究构建的3A蛋白104–115位氨基酸缺失的标记病毒可以作为发展口蹄疫鉴别诊断疫苗的候选毒株,用于我国未来口蹄疫A型的有效防控。     

Site-directed chemically-modified magnetic enzymes: fabrication,improvements, biotechnological applications and future prospects

Numerous enzymes of biotechnological importance have been immobilized on magnetic nanoparticles (MNP) via random multipoint attachment, resulting in a heterogeneous protein population with potential reduction in activity due to restriction of substrate access to the active site. Several chemistries are now available, where the modifier can be linked to a single specific amino acid in a protein molecule away from the active-site, thus enabling free access of the substrate. However, rarely these site-selective approaches have been applied to immobilize enzymes on nanoparticles. In this review, for the first time, we illustrate how to adapt site-directed chemical modification (SDCM) methods for immobilizing enzymes on iron-based MNP. These strategies are mainly chemical but may additionally require genetic and enzymatic methods. We critically examine each method and evaluate their scope for simple, quick, efficient, mild and economical immobilization of enzymes on MNP. The improvements in the catalytic properties of few available examples of immobilized enzymes are also discussed. We conclude the review with the applications and future prospects of site-selectively modified magnetic enzymes and potential benefits of this technology in improving enzymes, including cold-adapted homologues, modular enzymes, and CO₂-sequestering, as well as non-iron based nanomaterials.     

陆地棉GhSDP1及其启动子的克隆与表达分析

三酰基甘油脂肪酶(SDP1)是催化三酰甘油降解的关键酶,在植物油脂代谢调控中起着重要作用。克隆棉花SDP1并研究其在3种胁迫下的表达分析,为解析棉花SDP1的生物学功能提供依据。以陆地棉品种冀丰1271为试材,克隆GhSDP1编码序列和上游启动子序列;利用PlantCARE分析GhSDP1启动子区顺式作用元件;qRT-PCR检测逆境胁迫下GhSDP1的表达谱;通过烟草瞬时表达pGhSDP1启动子+GUS载体检测启动子活性。结果表明,GhSDP1的编码序列为2 541 bp,其在盐、低温和干旱胁迫下呈差异表达模式。pGhSDP1除具有启动子所必需的TATA-box和CAAT-box等基本顺式作用元件外,还含有多个与光响应、激素响应及逆境应答等相关的顺式作用元件。棉花pGhSDP1启动子能驱动GUS蛋白高效表达,具有较强的启动子活性。研究揭示了棉花GhSDP1参与胁迫应答的新功能。     

人机共融的主动型下肢假肢分层控制策略探讨

为研究当前主动型下肢假肢控制问题的解决策略,提出了主动型下肢假肢设计和分类的通用控制框架,包括3个分层结构:上层控制器、中层控制器、底层控制器。其中,上层控制器感知运动意图;中层控制器将运动意图转换为预期的装置状态,用于底层控制器的跟踪参考;底层控制器通过反馈控制或者前馈控制计算出预期装置状态与当前装置状态的误差,驱动假肢执行这些命令,形成控制闭环。结果表明,该通用控制框架可完整阐释主动型下肢假肢的人—机—环境共融关系,明确了分层控制策略的层级任务,为未来主动型下肢假肢的发展提供了理论指导。     

基于适应性循环理论与压力-状态-响应框架的区域社会-生态系统演进研究

21世纪以来都市圈快速扩张对区域社会-生态系统的可持续发展构成威胁,基于动态演进视角的区域社会-生态系统运行机制解析备受关注。以南京都市圈为例,从区域和城市两个尺度,基于适应性循环理论与压力-状态-响应框架解析2000—2019年近20年来都市圈社会-生态系统的交互适应循环阶段,以及每个阶段系统的差异化应激响应机制。研究表明南京都市圈社会-生态系统整体经历了3个适应循环周期,现处于新一轮的适应性循环阶段,系统适应性呈上升趋势,但社会子系统和生态子系统尚未取得协调。都市圈内各城市的社会-生态系统演进类型有所不同,可分为稳定增长型、波动增长型、不均衡发展型和生态危机型四类。未来需要采取差异化的社会-生态系统治理策略,确保都市圈整体优化发展。     

A geometric analysis of nutrient regulation in the generalist caterpillar Spodoptera littoralis (Boisduval)

Nutritional regulatory responses of the generalist caterpillar Spodoptera littoralis (Boisduval) were explored, in choice and no-choice experiments, using the Geometric Framework. In the choice experiment, newly moulted final instar larvae were provided with one of three protein-biased foods (PB-food: p35:c7, p28:c5.6 or p21:c4.2) and one of three equal protein-carbohydrate ratio foods (ER-food: p21:c21, p16.8:c16.8 or p12.6:c12.6). On five of the nine treatments, caterpillars independently regulated protein and carbohydrate intake to a mixture of 57 and 43%, respectively. However, when the concentration of the ER-food decreased and that of the paired PB-food increased, caterpillars progressively abandoned regulation and ate more of the PB-food. Despite these regulatory differences, performance (survivorship, growth and development) was similar across all nine treatments. In the no-choice experiment, caterpillars were given one of five foods (p35:c7, p28:c14, p21:c21, p14:c28 and p7:c35). Results indicated that caterpillars moved to a point in protein-carbohydrate space that was consistent with the Equal Distance Rule of compromise, a pattern previously predicted for generalist feeders. The insects on the two extreme foods, p35:c7 and p7:c35, showed reduced pupal mass and longer development, respectively. There was also strong evidence for post-ingestive regulation of nutrient utilisation, notably for protein.     

A phylogenetic supertree of the bats (Mammalia: Chiroptera)

We present the first estimate of the phylogenetic relationships among all 916 extant and nine recently extinct species of bats Mammalia: Chiroptera), a group that accounts for almost one-quarter of extant mammalian diversity. This phylogeny was derived by combining 105 estimates of bat phylogenetic relationships published since 1970 using the supertree construction technique of Matrix Representation with Parsimony (MRP). Despite the explosive growth in the number of phylogenetic studies of bats since 1990, phylogenetic relationships in the order have been studied non-randomly. For example, over one-third of all bat systematic studies to date have locused on relationships within Phyllostomidae, whereas relationships within clades such as Kerivoulinae and Murinae have never been studied using cladistic methods. Resolution in the supertree similarly differs among clades: overall resolution is poor (46.4%, of a fully bifurcating solution) but reaches 100% in some groups (e.g. relationships within Mormoopidae). The supertree analysis does not support a recent proposal that Microchiroptera is paraphyletic with respect to Megachiroptera, as the majority of source topologies support microbat monophyly. Although it is not a substitute for comprehensive phylogenetic analyses of primary molecular and morphological data, the bat supertree provides a useful tool for future phylogenetic comparative and macroevolutionary studies. Additionally, it identifies clades that have been little studied, highlights groups within which relationships are controversial, and like all phylogenetic studies, provides preliminary hypotheses that can form starting points for future phylogenetic studies of bats.     

Coral reefs in a high-latitude,siliciclastic barrier island setting: reef framework and sediment production at Inhaca Island,southern Mozambique

Inhaca Island (southern Mozambique) is located in a high-latitude setting along the seaward margins of the estuarine Maputo Bay and is subject to fluctuations in temperature and salinity, and high sedimentation and turbidity levels. Coral reefs are developed sporadically along the margins of intertidal channels, but framework development is severely restricted. Coral growth is bathymetrically limited (never exceeding 6-m depth), and framework accumulation is only present in the upper 1–2 m. Massive Porites sp. produce a basic reef structure, with other coral genera (mainly Acropora sp., Favia sp., Platygyra sp., Pocillopora sp., and Montipora sp.) colonizing available substrata. Sediment samples also indicate restricted carbonate sediment production, with siliciclastics (mainly quartz) a major sediment contributor (often >90%) and carbonate grain assemblages differing from those normally associated with lower-latitude reefs. Although corals, molluscs and coralline algae (including rhodoliths) represent dominant grain constituents, Halimeda is absent and there is a low diversity (four species identified) of benthic foraminifera (mainly Amphistegina sp.). Grain associations are therefore somewhat transitional in character, comprising elements of both tropical (chlorozoan) and temperate (foramol) grain assemblages. These patterns of reef and associated carbonate production emphasize the marginal character of these reef environments, which form one end member in a broad spectrum of marginal reef systems that are now being identified in a range of both high- and low-latitude settings.     

凝血瀑布机制的序结构分析方法

凝血系统的瀑布机制揭示了凝血因子间的酶促级联反应过程。在级联反应中,各个因子间明显地存在着序关系,而这种序关系的全体构成了系统的序结构。从系统论的观点看,系统的结构是系统性质与功能的基础,因此,通过模型化方法以及利用凝血因子序结构图建立的序结构分析方法,是分析凝血系统各因子相互作用的有用的工具。对蛋白Ｃ及ＴＦＰＩ进行序结构分析,进一步阐明了这两种抑制剂对外源途径凝血的作用特点。