Effects of size structure and habitat complexity on predator–prey interactions

1. A predator's ability to suppress its prey depends on the level of interference among predators. While interference typically decreases with increasing habitat complexity, it often increases with increasing size differences among individuals. However, little is known about how variation in intrinsic factors such as population size structure alters predator–prey interactions and how this intrinsic variation interacts with extrinsic variation. 2. By experimentally varying the level of vegetation cover and the size structure of the predatory damselfly Ischnura posita Hagen, we examined the individual and interactive effects of variation in habitat complexity and predator size structure on prey mortality. 3. Copepod prey survival linearly increased as the I. posita size ratio decreased and differed by up to 31% among different predator size structures. Size classes had an additive effect on prey survival, most likely because intraspecific aggression appeared size‐independent and size classes differed in microhabitat preference: large I. posita spent 14% more time foraging on the floor than small larvae and spent more time in the vegetation with increasing habitat complexity. Despite this difference in microhabitat use among size classes, habitat structure did not influence predation rates or interference among size classes. 4. In general, results suggest that seasonal and spatial variation in the size structure of populations could drive some of the discrepancies in predator‐mediated prey suppression observed in nature, and this variation could exceed the effects of variation in habitat structure.     

Using Protistan Examples to Dispel the Myths of Intelligent Design

ABSTRACT. In recent years the teaching of the religiously based philosophy of intelligent design (ID) has been proposed as an alternative to modern evolutionary theory. Advocates of ID are largely motivated by their opposition to naturalistic explanations of biological diversity, in accordance with their goal of challenging the philosophy of scientific materialism. Intelligent design has been embraced by a wide variety of creationists who promote highly questionable claims that purport to show the inadequacy of evolutionary theory, which they consider to be a threat to a theistic worldview. We find that examples from protistan biology are well suited for providing evidence of many key evolutionary concepts, and have often been misrepresented or roundly ignored by ID advocates. These include examples of adaptations and radiations that are said to be statistically impossible, as well as examples of speciation both in the laboratory and as documented in the fossil record. Because many biologists may not be familiar with the richness of the protist evolution dataset or with ID‐based criticisms of evolution, we provide examples of current ID arguments and specific protistan counter‐examples.     

A morpholino phenocopy of the cyclops mutation

Summary: Conditional and tissue specific gene targeting using the Cre‐loxP recombination system in combination with established ES cell techniques has become a standard for in vivo loss of function studies. In a typical flox and delete gene targeting strategy, the loxP‐neo‐loxP cassette is inserted into an intron and an additional loxP site is located in one of the homology arms so that loxP sites surround a functionally essential part of the gene. The neo cassette in usually removed by transient expression of the Cre recombinase in ES cells to avoid selection gene interference and genetic ambiquity. However, this causes a significant increase in manipulation of ES cells and often compromises ES cell pluripotency. Here we describe a method in which the floxed neo gene is removed from a knockout allele by infecting 16‐cell‐stage morulae by the recombinant Cre adenovirus. This virus provides only transient Cre expression and does not integrate into the mouse genome. Produced mosaic mice transmitted the desired allele without the neo cassette with high frequency to their offspring. This method is rapid and easy and does not require any special equipment. Moreover, because superovulated mice can be used as donors, this method does not necessitate a large number of mice. genesis 31:126–129, 2001. © 2001 Wiley‐Liss, Inc.     

Behavioural response of Mullus surmuletus to habitat modification by the invasive macroalga Caulerpa taxifolia

Densities of red mullet Mullus surmuletus have declined since 1996 at Cap Martin, Alpes‐Maritimes, France, following colonization by Caulerpa taxifolia . Foraging M. surmuletus were rarely observed over C. taxifolia or the seagrass Posidonia oceanica , but were observed over bare sand and endemic macroalgae. Within colonized sites (where the mean cover of C. taxifolia was 30–100%), fish were concentrated on areas with low cover of C. taxifolia (<21%). A difference in the frequency of observations of foraging groups (17%) was observed between sites with and without C. taxifolia . The observed patterns were probably due to a physical barrier to foraging that is presented by meadows of C. taxifolia . Changes to habitat structure that occur when the substratum is colonized by C. taxifolia influence the accessibility to benthic food resources, and consequently the foraging activities of fish that feed on benthic invertebrates. The decline in density of M. surmuletus at Cap Martin could be the result of fish emigration from colonized sites (unfavourable to the species) to uncolonized sites.     

A reliable lacZ expression reporter cassette for multipurpose, knockout-first alleles

Alteration of the mouse genome through homologous recombination in embryonic stem (ES) cells is the most accurate and versatile way to dissect gene function in a vertebrate model. Most often, a selectable marker is used to create a knockout allele by replacing an essential part of the gene. However, knockout strategies are limited because the mutation is present constitutively. Conditional approaches based on the Cre-loxP site-specific recombination (SSR) system address this limitation; however, it requires that all parts of the targeted gene remain in ES cells. Here we report success with a "knockout-first" strategy that ablates gene function by insertion of RNA processing signals without deletion of any of the target gene. Incorporation of site-specific recombination target sites creates a multipurpose allele for both knockout and conditional applications.     

Five fundamental ways in which complex food webs may spiral out of control

Theory suggests that increasingly long, negative feedback loops of many interacting species may destabilize food webs as complexity increases. Less attention has, however, been paid to the specific ways in which these ‘delayed negative feedbacks’ may affect the response of complex ecosystems to global environmental change. Here, we describe five fundamental ways in which these feedbacks might pave the way for abrupt, large-scale transitions and species losses. By combining topological and bioenergetic models, we then proceed by showing that the likelihood of such transitions increases with the number of interacting species and/or when the combined effects of stabilizing network patterns approach the minimum required for stable coexistence. Our findings thus shift the question from the classical question of what makes complex, unaltered ecosystems stable to whether the effects of, known and unknown, stabilizing food-web patterns are sufficient to prevent abrupt, large-scale transitions under global environmental change.     

A chalcid wasp acts chiefly as a hyperparasitoid by mostly using small uncommon hosts

Although ovipositing insects may predominantly use resources that lead to high offspring quality, exceptions to this rule have considerably aided understanding of oviposition decisions. We report the frequency of host species use by a solitary facultative hyperparasitoid, Brachymeria subrugosa Blanchard (Hymenoptera: Chalcididae). In our samples, the wasp attacks the large pupae of the moth Gonioterma indecora Zeller (Lepidoptera: Elachistidae), as well as the considerably smaller, and rarer, pupae of two of its other parasitoids. Consistent with conditional sex allocation models, the wasp produced mainly female offspring on the largest (moth) host, an unbiased sex ratio on the middle‐sized (parasitoid) host, and only males on the smallest (parasitoid) host. Adult offspring size was correlated with the size of the host attacked. These features strongly suggest that the two smaller, primary parasitoid, hosts produce lower‐quality offspring. Despite being more common, the proportion of hosts from which parasitoids emerged was lowest (14%) on the largest host species, and highest on the rarer middle‐sized (34%) and smallest (30%) hosts. This suggests that costs or constraints on attacking high‐quality primary hosts may be a selective force favouring the evolution of hyperparasitism.     

生态建设的理论分析

20世纪80年代以来,生态恢复逐渐成为生态学和环境科学研究的热点领域。总结了近年来有关生态恢复的众多研究成果,认为生态建设是人类理性行为参与下积极的生态恢复与重建过程,它具有复杂性、针对性、动态性和不确定性特征,受地理环境地域分异的影响,其类型多种多样。从方案运筹的角度,提出了生态建设的共性原则,包括面向区域的问题导向原则、目标的科学性原则、参与的广泛性原则和科学监测与评价原则。生态建设是一个不断试验、学习和优化的过程。具体包括问题识别、方案设计、决策、实施、监测与评价以及方案调整等重要环节。公众参与对于生态建设是一种很好的知识、信息和资源输入渠道,对活化生态建设的管理运行机制,提高生态建设决策的科学性和有效性能够发挥重要作用。以这些理论分析为依据,对中国生态建设中存在的主要问题展开深入剖析,并提出建立科学评价机制是提高生态建设有效性的核心方略。