Fibroblast heterogeneity in glucocorticoid regulation of collagen metabolism: Genetic or epigenetic?

Summary Cultured fibroblasts derived from normal human dermis show a consistent 62% inhibition of collagen synthesis by hydrocortisone, whereas cultures derived from keloids average only 30% inhibition and show a much larger strain to strain variation ranging from 75% inhibition to 49% stimulation. Examination of fibroblast clones indicates that this high variation among keloid strains is not due to differences in the proportion of normal and keloid cells in the mass culture populations. Small but significant differences in the effect of hydrocortisone on collagen deposition are also seen among these clonal populations, but are not related to the type of tissue from which cultures were derived. Two to three-fold differences among clones derived from a single individual were observed, possibly suggesting functional heterogeneity of dermal fibroblasts with regard to collagen metabolism under control conditions and in response to hydrocortisone. However, this variation among clones may simply reflect differences in clonal growth, inasmuch as both collagen synthesis and deposition, and the effect of hydrocortisone on these processes, are strongly affected by population density. This work was supported in part by PHS grants, CA-17229 from the National Cancer Institute and AG-02046 from the National Institute on Aging, DHHS; and by Grant RIM 78-17313 from the National Science Foundation.     

Methods for the production of multi-marker strains

Summary The production of a multi-marker strain given a series of strains each carrying a single marker will require a considerable investment in time and resources when based on a series of formal crosses. Such strains can be produced rapidly and with only minimal resources by recurrent cycles of random mating and selection, with selection based on the number of desired alleles carried.     

Paleogenetics of the late Roman-early Byzantine cemeteries at Sayala,Egyptian Nubia

Out of the five late Roman-early Byzantine cemeteries at Sayala, the three large burial complexes CI-III were found to represent the same population not only on the basis of 76·6% of the metric features already studied, but also of 72·9% of the 48 non-metric features examined in the present paper. The remaining features, which show different frequencies, were most probably related to some social and/or genetic isolation of the three subgroups (“lineages”) of the same basic population.The left-right asymmetry of the frequencies was practically irrelevant; sex differences were however present in one-third of the features observed.Some of the traits showed unusually high frequencies, revealing a high rate of inbreeding within a homogeneous population.To evaluate the relationships among the CI-III people and the neighbouring populations, 22 discrete traits were compared with the same traits studied in 11 Ancient Egyptian samples by Berry, Berry & Ucko (1967) and in 6 contemporary African Negro samples by Rightmire (1972). It was shown that the Sayala CI-III population does not resemble either of these groups. The fourth contemporary Sayala sample from A cemetery was also found to be not related with the CI-III sample on the basis of the same traits. The fifth contemporary Sayala sample from N cemetery was too small to be tested. Moreover, the comparison between the CI-III population and the C-group population of Sayala also revealed the lack of genetic continuity. The isolated position found in the CI-III population of Sayala agrees with the hypothesis that it would represent the Blemmyes, people originating from the Eastern Desert.     

Relationship between abundance, growth, egg size and fecundity in a landlocked population of longfin smelt, Spirinchus thaleichthys

Sixteen year-classes of longfin smelt, Spirinchus thaleichthys , show a consistent pattern of alternating year-class strength between even (strong) and odd (weak) years. A recent (1989) odd year-class grew as well as, if not better than, the late 1960s odd year-classes. However, fish in the even year-classes (1988 and 1990) were significantly smaller in size then the 1966 and 1968 cohorts. Associated with this reduction in growth of the even year-class fish is a decline in fecundity. Fecundity of the odd year-classes of smelt was also smaller than in the early 1960s. Mean egg diameter and gonadosomatic index were not statistically different between 1988 and 1989 year-classes but the relative fecundity was higher for the 1988 year-class than for 1989, suggesting a higher reproductive investment in the even year-class. Reduction in growth and associated reproductive traits is considered to result from a reduction in the abundance of mysids, a preferred prey species.     

Ant community composition and functional traits in new grassland strips within agricultural landscapes

1. Ongoing intensification and fragmentation of European agricultural landscapes dramatically reduce biodiversity and associated functions. Enhancing perennial noncrop areas holds great potential to support ecosystem services such as ant‐mediated pest control.
2. To study the potential of newly established grassland strips to enhance ant diversity and associated functions, we used hand collection data and predation experiments to investigate differences in (a) ant community composition and (b) biocontrol‐related functional traits, and (c) natural pest control across habitats in cereal fields, old grasslands, and new grassland transects of three years of age.
3. Ant species diversity was similar between new and old grasslands, but significantly higher in new grasslands than in surrounding cereal fields. Contrary, ant community composition of new grasslands was more similar to cereal fields and distinct from the species pool of old grasslands. The functional trait space covered by the ant communities showed the same distribution between old and new grasslands. Pest control did not differ significantly between habitat types and therefore could not be linked to the prevalence of functional ant traits related to biocontrol services in new grasslands.
4. Our findings not only show trends of convergence between old and new grasslands, but also indicate that enhancing ant diversity through new grasslands takes longer than three years to provide comparable biodiversity and functionality.
5. Synthesis and applications: Newly established grasslands can increase ant species richness and abundance and provide a consistent amount of biocontrol services in agroecosystems. However, three years after their establishment, new grasslands were still dominated by common agrobiont ant species and lacked habitat specialists present in old grasslands, which require a constant supply of food resources and long colony establishment times. New grasslands represent a promising measure for enhancing agricultural landscapes but must be preserved in the longer term to promote biodiversity and resilience of associated ecosystem services.

     

Heritability of the backtest response in piglets and its genetic correlations with production traits

The backtest response of a pig gives an indication of its coping style, that is, its preferred strategy to cope with stressful situations, which may in turn be related to production traits. The objective of this study was therefore to estimate the heritability of the backtest response and estimate genetic correlations with production traits (birth weight, growth, fat depth and loin depth). The backtest was performed by placing the piglet on its back for 60 s and the number of struggles (NrS) and vocalizations (NrV), and the latency to struggle and vocalize (LV) was recorded. In total, 992 piglets were subjected to the backtest. Heritability estimates for backtest traits were statistically moderate (although high for behavioral traits), with LV having the highest heritability estimate (0.56±0.10, P<0.001) and NrS having the lowest estimate (0.37±0.09, P<0.001). Backtest traits also had high genetic correlations with each other, with vocalization traits (NrV and LV) having the highest (−0.94±0.03, P<0.001), and NrS with NrV the lowest correlation (0.70±0.09, P<0.001). No significant correlations were found between backtest traits and production traits, but correlations between NrS and birth weight (−0.38±0.25), and NrV and loin depth (−0.28±0.19) approached significance (P=0.07). More research into genotype-by-environment interactions may be needed to assess possible connections between backtest traits and production traits, as this may depend on the circumstances (environment, experiences, etc.). In conclusion, heritability estimates of backtest traits are high and it would therefore be possible to select for them. The high genetic correlations between backtest traits indicate that it may be possible to only consider one or two traits for characterization and selection purposes. There were no significant genetic correlations found between backtest traits and production traits, although some of the correlations approached significance and hence warrant further research.     

Both facilitation and limiting similarity shape the species coexistence in dry alkali grasslands

Facilitation is an important driver of community assembly, and often overwhelms the effect of competition in stressed habitats. Thus, net effect of biotic interactions is often positive in stressed grasslands, where dominant species and litter can protect the subordinate species. Besides facilitation, niche partitioning can also support species coexistence leading to limiting similarity between subordinate species. Our aim was to provide a detailed analysis of fine-scale biotic interactions in stressed alkali grasslands. We supposed, that there are positive relationships between the main biomass fractions and species richness. We expected the expansion of trait ranges and the increase of trait dissimilarity with increasing biomass scores (total litter, green biomass of dominant species) and species richness. We studied the relationships between main biomass fractions, species richness, functional diversity and functional trait indices (ranges, weighted means and Rao indices). We used fine-scale biomass sampling in nine stands of dry alkali grasslands dominated by Festuca pseudovina. The detected relationships were always positive between the main biomass fractions (green biomass of dominant species, total litter and green biomass of subordinate species) and species richness. We found that the green biomass of dominant species and total litter increased ranges and dissimilarity of functional traits. Our results suggest that in dry alkali grasslands facilitation is crucial in shaping vegetation composition. The green biomass of dominant species and total litter increased the biomass production of subordinate species leading to overyielding. We found that mechanisms of facilitation and limiting similarity were jointly shaping the species coexistence in stressed grasslands, such as alkali grasslands.     

Using species traits to assess human impacts on near shore benthic ecosystems in the Canadian Arctic

Human activities have the potential to alter the diversity and composition of biological communities in natural environments, which can cause changes in ecosystem functioning. This has led to the development of environmental assessment techniques that take into account species identity, as species can contribute differently to various ecosystem processes. Biological Traits Analysis (BTA) is used to compare the abundances of specific biological traits in samples to produce information about how ecosystem functioning may change across a specific terrestrial or aquatic system. In the present study, BTA was used to assess the influence of municipal wastewater effluent on benthic marine communities in near shore soft sediments in four locations across the Canadian Arctic Territory of Nunavut, Canada. Shifts in trait composition were assessed relative to indicators of sediment enrichment (sediment chlorophyll, organic content, degree of anoxia), and natural variation in habitat characteristics (water depth, porosity, average grain size) at a site receiving wastewater and a reference site in each sampling location. The results indicated a mild enrichment effect of wastewater, as evidenced by changes in trait composition at three of the four sites that received wastewater inputs. However, the amount of variance in trait composition explained by metrics of wastewater enrichment in these locations were generally equal to or lower than the amount of variance explained by sediment characteristics related to natural processes. These results provide greater insight into the underlying causes and consequences of human activities than more traditional methods for environmental impact assessment, and can be directly applied in a management context.