黄龙山林区不同演替时期典型树种光诱导的气孔动力学研究

光诱导的气孔动力学响应快慢是影响植物叶水分利用效率的重要因素,为探索黄土高原不同演替阶段树种水分利用效率差异的生理机制,该研究以黄龙山林区典型树种(演替早期种山杨和白桦、演替后期种辽东栎)的幼龄实生苗为材料,采用盆栽试验,研究了叶片光诱导的气孔导度动力学参数差异及其与气孔特征、叶长期水分利用效率的关系。结果表明：(1)山杨和白桦气孔开放过程中气孔导度(g_s)增加的时间常数(K_i)小于辽东栎,但气孔关闭过程中气孔导度降低的时间常数(K_d)则大于辽东栎,表明山杨和白桦气孔开放更快,而辽东栎的气孔关闭更快。同时,气孔开放过程中山杨和白桦的g_s响应幅度均大于辽东栎,气孔关闭过程中山杨的g_s响应幅度亦大于辽东栎。(2)3种树种中,辽东栎的气孔密度最大,气孔最小,气孔指数最大,辽东栎气孔特征无法解释其慢速的气孔开放过程。 (3)山杨和白桦具有高的光合速率、最大羧化效率和最大电子传递速率,3种树种碳同位素比率(δ¹³C)表征的长期水分利用效率表现为山杨>白桦>辽东栎。研究认为,演替早期种山杨和白桦的高水分利用效率与其快速的气孔开放有关,而演替后期种辽东栎快速的气孔关闭并未增加其水分利用效率,且长期水分利用效率低于山杨和白桦,可能与辽东栎慢速的气孔开放限制了其光合速率有关。     

长白山阔叶红松林不同演替阶段林下红松幼苗能量与养分季节动态

为了解林下红松幼苗生长和养分存储季节动态,以长白山原始阔叶红松林(原始林)和次生杨桦林(次生林)林下2年生红松幼苗为对象,研究林下光合有效辐射(PAR)、幼苗生物量、非结构性碳水化合物(NSC)、全氮(N)和全磷(P)等指标的季节变化,分析两林分林下光照的季节动态及其差异对红松幼苗生长和养分积累的影响。结果表明: 原始林和次生林林下月PAR累积量季节变化都呈“双峰”型,夏季为郁闭期,两林分林下光线弱。春季和秋季为阔叶树无叶期,林下光照条件变好,且次生林林下光照明显好于原始林;原始林和次生林红松幼苗的生物量、NSC、全N和全P浓度的季节动态与林下光照的季节变化基本一致,在春季和秋季表现为显著增加,在夏季呈下降趋势。春季幼苗的淀粉浓度增加,夏季淀粉和可溶性糖浓度均逐渐降低,到8月达到最低值,秋季可溶性糖浓度显著升高。春季和秋季次生林林下幼苗的生物量和NSC浓度整体上均显著高于原始林,而夏季两林分差异不显著。因此,春季和秋季的林下光照条件差异是影响原始林和次生林中红松幼苗养分积累和生长更新差异的主要原因。     

The effect of temperature changes and K supply on the reproduction and growth of Bolboschoenus planiculmis

温度变化和钾添加对扁秆藨草生长及繁殖的影响 人类活动导致的气候变暖和农业面源污染已被认为是影响湿地植物生长和繁殖的重要因素。为了预 测和缓解这些人类活动的影响,研究沼泽植物如何响应这些环境变化具有重要意义。本研究选取在欧亚 大陆广泛分布的莎草科球茎植物扁秆藨草(Bolboschoenus planiculmis)为研究对象,考察气温变化(恒温： 15、20、25 °C及交替温度：20/10和30/15 °C)和钾添加(0、1、3、9 和18 mmol/L)对其生长和繁殖性状 的影响。研究结果表明,高的恒温(20、25 °C)比高的交替温度(30/15 °C)更有利于扁秆藨草球茎的形成, 而地上生物量和株高一般在较高温度下(30/15、25 °C)达到最大值。扁秆藨草的繁殖和生长性状均与施钾量 呈驼峰型关系,最适施钾量在1–3 mmol/L K。高恒温效应和最适钾浓度的交互作用对繁殖性状的促进作 用最大,但是,较高的温度(30/15和25 °C)和0–9 mmol/L的钾浓度只促进了生长性状的生长。综上所述, 扁秆藨草的种群优势度可能受益于全球变暖和额外的钾添加。     

Understorey plant community assemblage of Australian Eucalyptus woodlands under elevated CO2 is modulated by water and phosphorus availability

水分和磷调控的澳大利亚桉树林林下植物群落组合对二氧化碳浓度升高的响应 鉴于林下植物群落具有的关键性功能作用和全球范围内巨大的森林覆盖面积,研究林下群落对 CO₂浓度升高(eCO₂)的响应以及土壤资源在这些响应中的作用,对于了解CO₂浓度升高对森林生态系统造成的影响非常重要。本研究评估了在澳大利亚东部磷有限的桉树林林下群落中,两种限制性的资源(即水分和磷)在发芽、物候、覆盖率、群落组成和叶片性状等方面对eCO₂响应的作用。我们收集了含有当地土壤种子库的土壤,在温室条件下种植实验性的林下植物群落。研究结果表明,添加磷提高了植物的总体覆盖率,特别是在生长期的最初4 周以及水分含量高的条件下,而且该响应是由植物群落中的类禾本科植物所驱动。然而,随着实验的进行,不同处理方法之间的差异逐渐减小,所有处理在大约11周后均达到了80%左右的植物覆盖率。相反,植物覆盖率并未受到eCO₂ 的影响。多元分析结果反映出植物群落组成随时间的变化,盆栽从以裸土为主变为以高覆盖率的多样化群落为主。但是在实验过程中,磷的添加以及水分可利用性和CO₂之间的相互作用都对植物群落随时间的变化轨迹有所影响。CO₂浓度的升高也增加了群落水平的比叶面积,这表明植物群落对eCO₂的功能适应可能发生在成分响应开始之前。鉴于我们用种子库培育的林下群落对eCO₂ 的响应随着时间的推移而有 所变化,并且受到与磷和水分可利用性的相互作用的调节。我们的结果表明,在水分含量有限的系统中, 特别是在土壤养分可利用性低所导致的生产力响应受限的情况下,CO₂浓度的升高在塑造植物群落方面作用有限。     

Fungal community composition and diversity in the rhizosphere soils of Argentina (syn. Potentilla) anserina,on the Qinghai Plateau

Fungal communities and diversity in the rhizosphere soil of Argentina (syn. Potentilla) anserina were investigated by high-throughput sequencing. Soil fungal communities changed seasonally; nitrogen, phosphorus, and potassium contents in the soil were highly correlated with specific fungal groups and distributions. At the class level, the fungal community of A. anserina rhizosphere was mainly composed of Sordariomycetes, Pezizomycetes, Dothideomycetes, and Leotiomycetes. Moreover, rhizosphere soil was dominated by Ascomycota and characterized by a relatively high percentage of saprotrophic, parasitic, endophytic, and arbuscular mycorrhizal fungi: Mortierella (3.95 %), Fusarium (3.11 %), Cadophora (2.19 %), Phoma (2.01 %), Preussia (1.18 %) and Glomerales (0.37 %). FUNGuild analysis revealed different fungal ecotypes in rhizosphere soil, including symbiotic, saprotrophic, and pathogenic fungi. The structure and quantity of different ecotypes of fungi showed dynamic changes and may have different functions in the agro-ecosystem. These results provide a theoretical framework for further development and utilization of microbial resources to improve sustainable management strategies.     

Comprehensive landscape and interference of clonal haematopoiesis mutations for liquid biopsy: A Chinese pan-cancer cohort

Tumour-derived DNA found in the plasma of cancer patients provides the probability to detect somatic mutations from circulating cell-free DNA (cfDNA) in plasma samples. However, clonal hematopoiesis (CH) mutations affect the accuracy of liquid biopsy for cancer diagnosis and treatment. Here, we integrated landscape of CH mutations in 11,725 pan-cancer patients of Chinese and explored effects of CH on liquid biopsies in real-world. We first identified 5933 CHs based on panel sequencing of matched DNA of white blood cell and cfDNA on 301 genes for 5100 patients, in which CH number of patients had positive correlation with their diagnosis age. We observed that canonical genes related to CH, including DNMT3A, TET2, ASXL1, TP53, ATM, CHEK2 and SF3B1, were dominant in the Chinese cohort and 13.29% of CH mutations only appeared in the Chinese cohort compared with the Western cohort. Analysis of CH gene distribution bias indicated that CH tended to appear in genes with functions of tyrosine kinase regulation, PI3K-Akt signalling and TP53 activity, suggesting unfavourable effects of CH mutations in cancer patients. We further confirmed effect of driver genes carried by CH on somatic mutations in liquid biopsy of cancer patients. Forty-eight actionable somatic mutations in 17 driver genes were considered CH genes in 92 patients (1.80%) of the Chinese cohort, implying potential impacts of CH on clinical decision-making. Taken together, this study exhibits strong evidence that gene mutations from CH interfere accuracy of liquid biopsies using cfDNA in cancer diagnosis and treatment in real-world.     

Eco-evolutionary consequences of habitat warming and fragmentation in communities

Eco-evolutionary dynamics can mediate species and community responses to habitat warming and fragmentation, two of the largest threats to biodiversity and ecosystems. The eco-evolutionary consequences of warming and fragmentation are typically studied independently, hindering our understanding of their simultaneous impacts. Here, we provide a new perspective rooted in trade-offs among traits for understanding their eco-evolutionary consequences. On the one hand, temperature influences traits related to metabolism, such as resource acquisition and activity levels. Such traits are also likely to have trade-offs with other energetically costly traits, like antipredator defences or dispersal. On the other hand, fragmentation can influence a variety of traits (e.g. dispersal) through its effects on the spatial environment experienced by individuals, as well as properties of populations, such as genetic structure. The combined effects of warming and fragmentation on communities should thus reflect their collective impact on traits of individuals and populations, as well as trade-offs at multiple trophic levels, leading to unexpected dynamics when effects are not additive and when evolutionary responses modulate them. Here, we provide a road map to navigate this complexity. First, we review single-species responses to warming and fragmentation. Second, we focus on consumer–resource interactions, considering how eco-evolutionary dynamics can arise in response to warming, fragmentation, and their interaction. Third, we illustrate our perspective with several example scenarios in which trait trade-offs could result in significant eco-evolutionary dynamics. Specifically, we consider the possible eco-evolutionary consequences of (i) evolution in thermal performance of a species involved in a consumer–resource interaction, (ii) ecological or evolutionary changes to encounter and attack rates of consumers, and (iii) changes to top consumer body size in tri-trophic food chains. In these scenarios, we present a number of novel, sometimes counter-intuitive, potential outcomes. Some of these expectations contrast with those solely based on ecological dynamics, for example, evolutionary responses in unexpected directions for resource species or unanticipated population declines in top consumers. Finally, we identify several unanswered questions about the conditions most likely to yield strong eco-evolutionary dynamics, how better to incorporate the role of trade-offs among traits, and the role of eco-evolutionary dynamics in governing responses to warming in fragmented communities.     

The coordination of spindle‐positioning forces during the asymmetric division of the Caenorhabditis elegans zygote

In Caenorhabditis elegans zygote, astral microtubules generate forces essential to position the mitotic spindle, by pushing against and pulling from the cortex. Measuring microtubule dynamics there, we revealed the presence of two populations, corresponding to pulling and pushing events. It offers a unique opportunity to study, under physiological conditions, the variations of both spindle‐positioning forces along space and time. We propose a threefold control of pulling force, by polarity, spindle position and mitotic progression. We showed that the sole anteroposterior asymmetry in dynein on‐rate, encoding pulling force imbalance, is sufficient to cause posterior spindle displacement. The positional regulation, reflecting the number of microtubule contacts in the posterior‐most region, reinforces this imbalance only in late anaphase. Furthermore, we exhibited the first direct proof that dynein processivity increases along mitosis. It reflects the temporal control of pulling forces, which strengthens at anaphase onset following mitotic progression and independently from chromatid separation. In contrast, the pushing force remains constant and symmetric and contributes to maintaining the spindle at the cell centre during metaphase.     

Sixteen hundred years of increasing tree cover prior to modern deforestation in Southern Amazon and Central Brazilian savannas

Tropical ecosystems are under increasing pressure from land‐use change and deforestation. Changes in tropical forest cover are expected to affect carbon and water cycling with important implications for climatic stability at global scales. A major roadblock for predicting how tropical deforestation affects climate is the lack of baseline conditions (i.e., prior to human disturbance) of forest–savanna dynamics. To address this limitation, we developed a long‐term analysis of forest and savanna distribution across the Amazon–Cerrado transition of central Brazil. We used soil organic carbon isotope ratios as a proxy for changes in woody vegetation cover over time in response to fluctuations in precipitation inferred from speleothem oxygen and strontium stable isotope records. Based on stable isotope signatures and radiocarbon activity of organic matter in soil profiles, we quantified the magnitude and direction of changes in forest and savanna ecosystem cover. Using changes in tree cover measured in 83 different locations for forests and savannas, we developed interpolation maps to assess the coherence of regional changes in vegetation. Our analysis reveals a broad pattern of woody vegetation expansion into savannas and densification within forests and savannas for at least the past ~1,600 years. The rates of vegetation change varied significantly among sampling locations possibly due to variation in local environmental factors that constrain primary productivity. The few instances in which tree cover declined (7.7% of all sampled profiles) were associated with savannas under dry conditions. Our results suggest a regional increase in moisture and expansion of woody vegetation prior to modern deforestation, which could help inform conservation and management efforts for climate change mitigation. We discuss the possible mechanisms driving forest expansion and densification of savannas directly (i.e., increasing precipitation) and indirectly (e.g., decreasing disturbance) and suggest future research directions that have the potential to improve climate and ecosystem models.