Synthesis and characterization of two new triazolate-aliphatic dicarboxylate bridged Zn(II) coordination polymers based on 2D layer motifs with different crystal packing

Two new zinc(II)-triazole-aliphatic dicarboxylate coordination polymers, [Zn(trz)(Hsuc)]_n (1), [Zn₂(trz)₂(tar)]_n (2), have been hydrothermally synthesized by reaction of Zn salt, Htrz with H₂suc and H₂tar, respectively (Htrz = 1,2,4-triazole, H₂suc = succinic acid, H₂tar = tartaric acid).Their structures were determined by single-crystal X-ray diffraction analyses and further characterized by X-ray powder diffraction, elemental analyses, IR spectra and TG analyses. Compound 1 displays a 2D layer structure containing {[Zn₄(trz)₄]⁴⁺}_n layers decorated by the suc ligand. Compound 2 is in a 3D structure formed by the interconnection of 2D {[Zn₄(trz)₄]⁴⁺}_n layers with tar ligand, resulting a 3,4-connected topological network. Due to the different coordination mode and conformation of aliphatic carboxylate ligand, the similar 2D {[Zn₄(trz)₄]⁴⁺}_n layers stack in the -AAA- fashion in 1, while the {[Zn₄(trz)₄]⁴⁺}_n layers hold together in the -ABAB- stacking sequence in 2. Additionally, the two compounds show strong fluorescence in the solid state at room temperature.     

CD exciton chirality method for determination of the absolute configuration of beta-hydroxy-alpha-amino acid derivatives

The absolute configuration of beta-hydroxy-alpha-amino acids was studied by CD exciton chirality method using 7-diethylaminocoumarin-3-carboxylate as a red-shifted chromophore. The CD spectra of bischromophoric derivatives of (S)-serine and (2S,3R)-threonine methyl esters (2 and 7) were compared with those of acyclic vic-aminoalcohols and diols (3--6 and 8--9). This study indicates that the polar carboxylate group of beta-hydroxy-alpha-amino acids makes them a unique subclass of vic-aminoalcohols. By combining the data of CD and NMR coupling constants, we are able to correlate their preferred conformer B and positive CD to the corresponding absolute configuration.     

Hydrothermal syntheses, structures and properties of five rare earth coordination polymers with (1,3,4-thiadiazole-2,5-diyldithio)diacetic acid

Hydrothermal reactions of rare earth ions(III) with a flexible building unit (1,3,4-thiadiazole-2,5-diyldithio)diacetic acid (H₂tzda) lead to five novel coordination polymers with 1D chain and 3D network structures, namely, {[Y₂(tzda)₃(H₂O)₁₀] · 5H₂O}_n (1) and [Ln₂(tzda)₃(H₂O)₅]_n [Ln = Er (2), Pr (3), Nd (4), Eu (5)]. Compound 1 has one-dimensional ribbon-like chain structure constructed by [Y₂(tzda)₃] units through the syn-anti bidentate bridging mode of carboxylate groups. Compounds 2-5 possess compact three-dimensional network structures which are made up of [Ln₂(tzda)₃] (Ln = Er, Pr, Nd and Eu) units bridged by carboxylate groups. In these compounds, the flexible tzda²⁻ ligand is versatile and displays six different coordination fashions to meet the requirement of the coordination preference of the metal center. Furthermore, the magnetic behaviors for 2-5 in the temperature range of 5.0-300 K and photoluminescent property of 5 are significantly investigated in this paper.     

甘蔗ACC氧化酶基因片段的克隆与序列分析

1- 氨基环丙烷-1-羧酸（ACC）氧化酶是植物乙烯合成的一个关键酶,乙烯作为一种内源激素,对植物生长、老熟过程有多方面的调节作用。根据报道的各种植物ACC氧化酶氨基酸序列上前后两个保守区设计两个简并引物,以甘蔗总DNA为模板,通过PCR扩增到一个940bp的基因片段。将片段序列在MCBI的BLAST软件上进行同源性搜寻,显示的63个序列全部是ACC氧化酶基因,因而认为克隆到的片段就是甘蔗ACC氧化酶基因的一个成员。经对不同植物来源的ACC氧化酶基因家族进行比较分析,去除一个103bp的“内含子“后,推导的氨基酸序列为279个残基,占推测全长氨基酸残基总数的86％左右。经同源性分析,序列与毛竹和水稻ACC氧化酶的同源率达到86％。系统进化分析表明,该序列最先与水稻、其次和香蕉的ACC氧化酶聚类,然后再与双子叶植物的ACC氧化酶聚类,符合按形态特征分类的血缘关系。基因的获得对下一步了解乙烯的合成表达与甘蔗生长、成熟过程之间的关系奠定了基础。     

番茄ACC合成酶cDNA克隆及其对果实成熟的反义抑制

利用RT—PcR技术克隆了ACC合成酶多基因家族成员之－LE-ACC2编码区约1．7kb的cDNA,经酶切图谱和序列分析鉴定无误后,反向插入到植物表达载体pBin437中,构建了表达Acc合成酶反望RNA的二元载体。经农杆菌途径转化番茄“丽春”品种后,通过PCR检测从抗卡那霉素再生植株中筛选到6株转基因植株,Southern杂交确证了外源基因是以单拷贝插入到番茄染色体中;对果实乙烯释放的测定结果表明转基因番茄果实的乙烯释放量仅为对照的30％左右,在室温下转基因番茄果实采后保存60 d以上仍然没有变红、软化。以上结果表明其反义RNA在转基因番茄中的表达能有效地抑制乙烯的生物合成从而延缓果实成熟,表现出良好的耐储保鲜特性。对转基因植株子一代(T1)的分析结果进一步表明反义ACC合成酶基因以典型的单基因方式传到子代。通过对子二代的分析已初步筛选到一 个耐储藏的转基因番茄纯合品系。     

Luminescent lanthanide mixed N-phthaloylglycinate and terephthalate coordination polymers: Structural and optical properties

A new class of lanthanide mixed-carboxylate ligands compounds with formula {[Ln₂(phthgly)₄(bdc)(H₂O)₆]·(H₂O)₄} _∞ , labelled as Ln³⁺: Eu ( 1 ) and Gd ( 2 ) coordination polymers (CP) were synthesized under mild reaction conditions between lanthanide nitrate salts and a solution of N-phthaloylglycine (phthgly) and terephthalic (bdc) ligands. The ( 1) and ( 2) coordination polymers were formed by symmetric binuclear units, in which phthgly and bdc carboxylate ligands are coordinated to the lanthanide ions by different coordination modes. Surprisingly, all organic ligands participate in hydrogen bonding interactions, forming an extremally rigid crystalline structure. The red narrow emission bands from the ⁵D₀→⁷F_J transitions of the Eu³⁺ ion show a high colour purity. The intramolecular energy transfer process from L→Eu³⁺ ion has been discussed. The experimental intensity parameters (Ω_2,4) reflect lower angular distortion and polarizability of the chemical environment around the metal ion compared with other Eu³⁺ compounds reported in the literature. This novel class of coordination polymer offers a more attractive platform for developing luminescent functional materials for different applications.     

A class of carbonic anhydrase IX/XII – selective carboxylate inhibitors

Abstract

A small series of 2,4-dioxothiazolidinyl acetic acids was prepared from thiourea, chloroacetic acid, aromatic aldehydes, and ethyl-2-bromoacetate. They were assayed for the inhibition of four physiologically relevant carbonic anhydrase (CA, EC 4.2.1.1) isoforms of human (h) origin, the cytosolic hCA I and II, and the transmembrane hCA IX and XII, involved among others in tumorigenesis (hCA IX and XII) and glaucoma (hCA II and XII). The two cytosolic isoforms were not inhibited by these carboxylates, which were also rather ineffective as hCA IX inhibitors. On the other hand, they showed submicromolar hCA XII inhibition, with K_Is in the range of 0.30–0.93?µM, making them highly CA XII-selective inhibitors.     

Design,synthesis, and evaluation of carboxyl-modified oseltamivir derivatives with improved lipophilicity as neuraminidase inhibitors

In this study, a series of carboxyl-modified oseltamivir analogs with improved lipophilicity were designed and synthesized, and their inhibitory activities against neuraminidase from influenza A virus H5N1 subtype were evaluated. The results demonstrated that compound 5m exhibited potent inhibitory activity (IC₅₀?=?1.30?±?0.23?μM), and it targeted the recently discovered 430-cavity. Compound 5m (Log D?=??0.12) is more lipophilic than oseltamivir carboxylate (Log D?=??1.69) at pH 7.4, which is potentially propitious to improved membrane permeability and oral drug absorption. Meanwhile, 5m showed high stability in human liver microsomes. The findings of this study can be valuable in identifying neuraminidase inhibitors with optimal lipophilicity and in the exploration of 430-cavity.     

Microbial community composition and dynamics in a semi-industrial-scale facility operating under the MixAlco™ bioconversion platform

Aims:  To monitor microbial community dynamics in a semi‐industrial‐scale lignocellulosic biofuel reactor system and to improve our understanding of the microbial communities involved in the MixAlco? biomass conversion process. Methods and Results:  Reactor microbial communities were characterized at six time points over the course of an 80‐day, mesophilic, semi‐industrial‐scale fermentation using community qPCR and 16S rRNA tag‐pyrosequencing. We found the communities to be dynamic, bacterially dominated consortia capable of changing quickly in response to reactor conditions. Clostridia‐ and Bacteroidetes‐like organisms dominated the reactor communities, but ultimately the communities established consortia containing complementary functional capacities for the degradation of lignocellulosic materials. Eighteen operational taxonomic units were found to share strong correlations with reactor acid concentration and may represent taxa integral to fermentor performance. Conclusions:  The results of this study indicate that the emergence of complementary functional classes within the fermentor consortia may be a trait that is consistent across scales, and they suggest that there may be flexibility with respect to the specific identities of the organisms involved in the fermentor’s degradation and fermentation processes. Significance and Impact of the Study:  This study provides new information regarding the composition, dynamics and potential flexibility of the microbial communities associated with the MixAlco? process and is likely to inform the improvement of this and other applications that employ mixed microbial communities.