新型冠状病毒相关TMPRSS2蛋白结构特征和抗原表位分析

采用生物信息学方法分析预测新型冠状病毒(Severe acute respiratory syndrome coronavirus 2,SARS-CoV-2)跨膜蛋白酶丝氨酸2(transmembrane protease serine 2,TMPRSS2)的理化特性、结构特征和抗原表位,为抗SARS-CoV-2药物研...     

利用人摄金蛋白(METALLOTHIONEIN)启动子和牛乳突瘤病毒在哺乳动物细胞中表达乙型肝炎表面抗原

用人Metallothioenin-Ⅱ启动子、乙型肝炎表面抗原基因,SV40早期基因的编接位点和多聚A位点构成了表达组件,然后插入到经改造过的BpV-1质粒中。所得质粒pdMTsAg-5转染小鼠C127细胞得到转化克隆。Ausria Ⅱ检测证明13株中有12株能产生HBsAg。对其中一株进行HBsAg收率观察,隔天收获为292.6～525.8μg/升,每天收获为200.9～369.0μg/升,可连续收获60天以上。经重金属离子诱导后,收率增至583～854.4μg/升。培养液经超滤浓缩和两次密梯离心后,可集中为一个狭窄的峰,顶峰的Ausria Ⅱ cpm为1.05×10~7,密度为1.20g/ml。     

三种淋巴瘤细胞CD52抗原呈现稳定性研究及其应用

评估淋巴瘤细胞MC/CAR、HUT78和RAMOS的CD52抗原呈现稳定性,并比较三种细胞用于抗CD52单抗活性检测中的优劣性。采用免疫荧光法检测淋巴瘤细胞MC/CAR、HUT78和RAMOS的CD52抗原呈现率,分析MC/CAR、HUT78和RAMOS传代培养5~20代CD52抗原呈现稳定性。分别以MC/CAR、HUT78和RAMOS作为抗CD52单抗结合活性和补体依赖细胞毒性的靶细胞进行检测,并比较其优劣性。结果显示,MC/CAR、RAMOS和HUT78的CD52抗原呈现率分别为95.5%、63.2%和38.3%。MC/CAR传代培养5~20代CD52抗原呈现率均大于90%。RAMOS传代培养5~13代CD52抗原呈现率介于60%~67%,第14~15代CD52抗原呈现率介于50%~60%,第16~20代细胞CD52抗原呈现率介于40%~50%。HUT78传代培养5~20代CD52抗原呈现率介于26.7%~38.9%。淋巴瘤细胞MC/CAR在抗CD52单抗的结合活性检测中呈现出更好的剂量依赖曲线。淋巴瘤细胞RAMOS在抗CD52单抗的补体依赖细胞毒性检测中呈现出更好的剂量效应曲线。CD52抗原呈现率方面MC/CAR>RAMOS>HUT78。结果表明,MC/CAR更适用于抗CD52单抗的结合活性的检测,RAMOS适用于抗CD52单抗的补体依赖细胞毒性检测。     

超声造影技术联合血清CA12-5、CEA、HE-4检查诊断卵巢良恶性肿瘤的临床价值研究

摘要 目的：研究超声造影技术联合血清糖类抗原125（CA12-5）、癌胚抗原（CEA）及人附睾分泌蛋白4（HE-4）检查诊断卵巢良恶性肿瘤的临床价值。方法：将我院从2019年1月～2020年3月收治的83例卵巢肿瘤患者纳入研究。将其按照病理学诊断结果分成恶性组40例与良性组43例,按照是否发生淋巴结转移将恶性组分为转移亚组18例和未转移亚组22例。比较恶性组和良性组各项超声造影指标水平和血清CA12-5、CEA及HE-4水平,比较转移亚组和未转移亚组血清CA12-5、CEA及HE-4水平。通过受试者工作特征（ROC）曲线分析超声造影技术联合血清CA12-5、CEA及HE-4在卵巢良恶性肿瘤中的诊断能效。分析血清CA12-5、CEA及HE-4与卵巢恶性肿瘤患者淋巴结转移的关系。结果：恶性组超声造影增强强度及增强速率均高于良性组,而增强时间短于良性组（P＜0.05）。恶性组血清CA12-5、CEA及HE-4水平均高于良性组（P＜0.05）。超声造影技术联合血清CA12-5、CEA及HE-4诊断卵巢肿瘤良恶性的曲线下面积、灵敏度及特异度分别为0.947、0.96、0.93,高于超声造影技术单独检测或血清CA12-5、CEA及HE-4联合检测。转移亚组患者的血清CA12-5、CEA及HE-4水平均高于未转移亚组患者（P＜0.05）。结论：超声造影技术联合血清CA12-5、CEA及HE-4检查诊断卵巢良恶性肿瘤的价值较高,且联合检测血清CA12-5、CEA及HE-4水平有助于判断淋巴结转移情况,具有较高的临床应用价值。     

Identification of a novel adhesion molecule in human leukocytes by monoclonal antibody LB-2

Monoclonal antibody LB-2 to a surface antigen on human B cells, lymphoblast, monocytes and vascular endothelial cells largely inhibited adhesion among Epstein Barr virus-immortalized normal B cells (EBV-B) and concanavalin A-stimulated blood mononuclear cells (Con A-BMC) before and after phorbol ester treatment. The antibody inhibited to a lesser extent phorbol ester-induced aggregation of monocytes, U937 cells and fresh BMC and had virtually no inhibitory effect on the adhesion among enriched T cells and granulocytes. A surface glycoprotein band of 84 kDa was obtained from EBV-B cells by immunoprecipitation and gel electrophoresis. Immunological and biochemical studies clearly distinguished this molecule from gp90 and associated glycoproteins which also mediate leukocyte adhesion.     

MHC Class I Immunopeptidome: Past,Present, and Future

In the 35 years since the revelation that short peptides bound to major histocompatibility complex class I and II molecules are the secret of the major histocompatibility complex–restricted nature of T-cell recognition, there has been enormous progress in characterizing the immunopeptidome, the repertoire of peptide presented for immunosurveillance. Here, the major milestones in the journey are marked, the contribution of proteasome-mediated splicing to the immunopeptidome is discussed, and exciting recent findings relating the immunopeptidome to the translatome revealed by ribosome profiling (RiboSeq) is detailed. Finally, what is needed for continued progress is opined about, which includes the infusion of talented young scientists into the antigen-processing field, currently undergoing a renaissance; thanks in part to the astounding success of T-cell–based cancer immunotherapy.     

In silico epitope-based vaccine design against influenza a neuraminidase protein: Computational analysis established on B- and T-cell epitope predictions

ObjectiveInfluenza A virus belongs to the most studied virus and its mutant initiates epidemic and pandemics outbreaks. Inoculation is the significant foundation to diminish the risk of infection. To prevent an incidence of influenza from the transmission, various practical approaches require more advancement and progress. More efforts and research must take in front to enhance vaccine efficacy.MethodsThe present research emphasizes the development and expansion of a universal vaccine for the influenza virus. Research focuses on vaccine design with high efficacy. In this study, numerous computational approaches were used, covering a wide range of elements and ideas in bioinformatics methodology. Various B and T-cell epitopic peptides derived from the Neuraminidase protein N1 are recognized by these approaches. With the implementation of numerous obtained databases and bioinformatics tools, the different immune framework methods of the conserved sequences of N1 neuraminidase were analyzed. NCBI databases were employed to retrieve amino acid sequences. The antigenic nature of the neuraminidase sequence was achieved by the VaxiJen server and Kolaskar and Tongaonkar method. After screening of various B and T cell epitopes, one efficient peptide each from B cell epitope and T cell epitopes was assessed for their antigenic determinant vaccine efficacy. Identical two B cell epitopes were recognized from the N1 protein when analyzed using B-cell epitope prediction servers. The detailed examination of amino acid sequences for interpretation of B and T cell epitopes was achieved with the help of the ABCPred and Immune Epitope Database.ResultsComputational immunology via immunoinformatic study exhibited RPNDKTG as having its high conservancy efficiency and demonstrated as a good antigenic, accessible surface hydrophilic B-cell epitope. Among T cell epitope analysis, YVNISNTNF was selected for being a conserved epitope. T cell epitope was also analyzed for its allergenicity and cytotoxicity evaluation. YVNISNTNF epitope was found to be a non-allergen and not toxic for cells as well. This T-cell epitope with maximum world populace coverages was scrutinized for its association with the HLA-DRB1*0401 molecule. Results from docking simulation analyses showed YVNISNTNF having lower binding energy, the radius of gyration (Rg), RMSD values, and RMSE values which make the protein structure more stable and increase its ability to become an epitopic peptide for influenza virus vaccination.ConclusionsWe propose that this epitope analysis may be successfully used as a measurement tool for the robustness of an antigen–antibody reaction between mutant strains in the annual design of the influenza vaccine.     

可溶性HLA-A*0203-BSP原核表达载体的构建及其在大肠杆菌中的高效表达

目的：构建HLA-A*0203重链胞外域羧基端融合生物素化酶BirA底物肽(BSP)的融合蛋白（HLA-A*0203-BSP）的原核表达载体并在大肠杆菌中进行表达。方法：以RT-PCR方法从HLA-A2+ 供者外周血单个核细胞(PBMC)中克隆HLA-A*0203重链基因的cDNA并测序鉴定,然后以PCR方法构建HLA-A*0203-BSP的原核表达载体,在大肠杆菌BL21(DE3)菌株中诱导表达并以免疫印迹鉴定。结果：DNA测序显示,从3名HLA-A2+ 供者PBMC中克隆的cDNA中,只有从供者2获得编码HLA-A*0203重链基因的cDNA。将编码重链胞外域1-276的序列和编码BSP的序列融合,构建HLA-A*0203-BSP融合蛋白的原核表达载体并经测序验证。该融合蛋白在BL21(ED3)中获得高效表达,约占菌体总蛋白的30％;产物相对分子质量约为34 kD,与理论大小一致。Western印迹分析显示融合蛋白完全存在于包涵体中。结论：成功克隆HLA-A*0203重链基因的cDNA,构建HLA-A*0203-BSP融合蛋白的原核表达载体,并在大肠杆菌中获得高效表达,为制备HLA-A*0203四聚体打下基础。     

四磨汤对宫颈癌化疗患者胃肠功能的保护作用及对血清IL-8、CEA、CA125水平的影响

目的:研究四磨汤对恩度联合力朴素治疗的宫颈癌患者胃肠功能的保护作用及对其血清白细胞介素8(IL-8)、癌胚抗原(CEA)、糖类抗原125(CA125)的影响。方法:选取2015年9月至2016年8月我院收治的88例宫颈癌患者,根据患者入院顺序分为观察组和对照组,每组44例。对照组在放疗基础上加以恩度联合力朴素完成化疗,观察组在对照组治疗基础上加以四磨汤。比较两组患者治疗前后血清IL-8、CEA、CA125水平及外周血CD3~+、CD4~+、CD8~+细胞比例的变化和胃肠道毒副反应、胃肠道放射性损伤的发生情况。结果:治疗后,两组患者血清IL-8、CEA、CA125水平均较治疗前显著降低(P0.05),且观察组的血清IL-8、CEA、CA125水平较对照组明显降低(P0.05);两组患者CD3~+、CD4~+细胞比例较治疗前显著降低(P0.05),CD8~+细胞比例较治疗前显著升高(P0.05),但观察组的CD3~+、CD4~+、CD8~+细胞比例细胞比例显著高于对照组(P0.05)。观察组不良反应发生率、早期胃肠道放射性损伤发生率、Ⅱ、Ⅲ级胃肠道放射性损伤率均显著低于对照组(P0.05)。结论:四磨汤用于恩度联合力朴素治疗的宫颈癌患者能有效保护患者胃肠功能,降低患者血清IL-8、CEA、CA125水平,增强患者免疫力。     

休斯敦共识会议:关于美国幽门螺杆菌感染的检测

虽然,美国已有关于幽门螺杆菌(Helicobacter pylori,H.pylori)检测和治疗的指南,但对患者进行治疗前后H.pylori检测的建议通常没有得到遵循。来自美国不同地区研究成人和儿童H.pylori感染处理的11名专家参加了"休斯敦共识会议",并在会议中讨论诊断H.pylori感染的关键因素:确定目标人群进行H.pylori检测;抗生素药物敏感性对检测和治疗的影响;确认H.pylori感染和确认根除治疗结果的合适方法。专家被分为多组,采用改良的Delphi小组讨论法来评定需行H.pylori检测的目标人群,抗生素药物敏感性检测方法和治疗方法、根除治疗后的结果确认及相关检测方法。证据质量和建议强度均采用GRADE系统进行评估。各工作小组的结果将提交给所有小组成员进行最后的共识表决。在专家共识会议之后,这些结论将提交给一个独立的胃肠病学专家小组进行验证,并对会议中提出的29项声明进行认同程度评估。最后的建议是基于现有最佳证据提出,并提供带参考文献的共识声明,以便在全美各地的医疗保健体系中实施。