Anisotropy decay of fluorescence as an experimental approach to protein dynamics

This minireview makes an initial assessment of the progress made using anisotropy decay measurements for investigating the conformational changes and molecular dynamics in soluble systems. A critical analysis of available data is presented. The anisotropy decays of the tryptophan fluorescence of staphylococcal nuclease, adrenocorticotropin, melittin and of labeled transfer RNA were studied for investigating the functional conformational changes of these systems. The emissions of variously labeled immunoglobulins have been used to elucidate the conformations of these proteins before and after the binding of specific antibodies. Labeled myosin and its fragments have given information on the functional motions of the protein domains. The anisotropy decays of labeled and natural hemoglobin systems have been utilized for exploring the allosteric behavior of these molecules. The data suggest a wide applicability of this technique to the study of protein dynamics and conformational changes of macromolecules.     

Synchrotron-excited time-resolved fluorescence spectroscopy of adenosine,protonated adenosine and 6N, 6N-dimethyladenosine in aqueous solution at room temperature

The fluorescence behavior of adenosine in neutral solution has been studied by time-resolved spectroscopy using synchrotron excitation and timecorrelated single photon counting, and by decay time measurements. Three emissions have been identified and correlated with three excitation spectra. The assignment of these transitions has been made by comparison with similar measurements on ⁶N, ⁶N-dimethyladenosine (6 DMA), and on adenosine in acid solution (ADO H⁺). It is proposed that two of the transitions of adenosine which correlate with 6DMA originate from coplanar and orthogonal rotational conformers of the amino group. The other transition, correlating with ADO H⁺ may originate either from the ³H-imino tautomer, or from a differently solvated rotational conformer.A partial presentation of this work has been made at the Second Congress of the European Society for Photobiology Padova, Italy, 6–10 September 1987     

The intrinsic rates of increase of insects of different sizes

ABSTRACT.

• 1 A negative relationship between intrinsic rate of increase, r, and body size has only clearly been shown using data for species drawn from a number of phyla and covering several orders of magnitude in size. Analyses for more closely related species are equivocal.
• 2 Data for ninety-one species of insects, from nine orders, were used to examine the correlation between intrinsic rate of increase and size.
• 3 Intrinsic rate of increase was negatively correlated with both length and weight across orders, but no relationship could be shown within orders.
• 4 Generation times were positively related to body size, but there was no relationship between net reproductive rate (R_Q) and size.
• 5 These results support the hypothesis that documented relationships between species size and colonization success in insects could be a consequence of the scaling of intrinsic rate of increase with size.

     

Activity budgets and use of enclosed space by wild boars (Sus scrofa) in captivity

This research was conducted on a captive group of eight wild boars: Four wildborn adults (one male and three females) and four piglets (one male and three females), born in captivity two months before the beginning of the study. They were housed in the Rome Zoo in a 1,000 sq m enclosure furnished with trees, mud pools, a water basin, and two small barns. Data on eight behavioral states (sleeping, resting, rooting, eating, walking, standing, scratching, and nursing) were collected by instantaneous sampling at 10-minute intervals. The spatial location of each subject was also noted, as well as closeness to conspecifics. Results showed that adults and piglets differed in their activity budgets. Activity patterns showed a significant correlation with the mean temperatures. Furthermore, there was a significant difference in the use of the exhibit areas between adults and piglets. This study suggests a social structure in which the core is constituted by females and their yearlings. The nonbreeding female has a more marginal position than the breeding ones. Finally, the male tends to be even more peripheral and solitary. Our results are partly consistent with the data obtained in studies on free-ranging wild boars (Mauget, 1980; Dardaillon, 1984).     

Covariance of adult size and development time in the parasitoid waspAphidius ervi in relation to the size of its host,Acyrthosiphon pisum

Summary Adult size (in terms of dry weight; DW) and development time (T _p ) of the solitary parasitoidAphidius ervi varied when reared in different nymphal instars of its host, apterous virginoparae of the pea aphid (Acyrthosiphon pisum). Parasitoid DW increased with an increase in the DW of the host at parasitization, from the first to the third aphid instar. Female wasps gained 1.1 times more in DW than their male counterparts in all four host classes, butT _p did not significantly differ between the sexes. Parasitoid DW was consistently more variable thanT _p . The two traits covaried positively with an increase in host size from the first to the third instar, but they varied independently in parasitoids from fourth-instar hosts. The host size (and stage) at the time of parasitization imposes constraints on the growth and development of immatureA. ervi that are reflected in the pattern of covariation between DW andT _p . When growing in aphids below a certain size threshold, parasitoids can maximize fitness by a trade-off between DW andT _p . Consequently, the assumption implicit in host-size models of parasitoid oviposition decisions — that females incur a relatively greater reduction in size (used as an index of fecundity) than males when developing in poor quality hosts — can be falsified.     

Oxygen free radicals in volume overload heart failure

It has been suggested that oxygen free radicals (OFR) depress the excitation-contraction coupling in cardiac muscle. It is possible that a decrease in the cardiac contractility in the failing heart may be due to an increased OFR producing activity of polymorphonuclear (PMN) leukocytes. We studied the OFR producing activity (chemiluminescence) of PMN leukocytes from blood in dogs with heart failure due to chronic volume overload. The animals were divided into two groups: I) normal, (n = 10): II) dogs with mitral insufficiency (MI) of 6 to 9 months duration, (n = 10). Hemodynamic studies were done to establish the presence of heart failure. Blood samples were collected to measure PMN leukocyte chemiluminescence. There was a decrease in the cardiac index and index of myocardial contractility (dp/dt/IIP) and an increase in the left ventricular end-diastolic pressure in dogs with MI indicating left ventricular failure. The peak chemiluminescent activity of the PMN leukocytes in blood of dogs with failure was about four folds greater than that in the blood from normal dogs. These results suggest that there may be an increased OFR generation in dogs with volume overload heart failure. The decrease in the myocardial contractility in the failing heart might be due to an increase in the OFR produced by the PMN leukocytes.     

Labor specialization and the formation of markets for food in a Shipibo subsistence economy

Traditionally, the Shipibo economy was subsistence-based with shifting cultivation supplying calories, principally in the form of plantains and root crops, while fishing and hunting provided animal proteins to the diet. Some men, who recently began producing rice for sale in regional markets, now allocate less time to wild food procurement. Moreover, this trend has been accompanied by the nucleation of households, a growing cash market for agricultural labor, and the intravillage sale of faunal foods. This paper shows that with cash cropping, some Shipibo now freely distribute less food to others in relation to the amount they produce. To account for this change, a theory is developed based on time allocation and patterns of economic behavior reported throughout the Amazon. This theory is then applied to explain specialization and the formation of cash markets for food labor among the Shipibo.     

Transition time control analysis of a glycolytic system under different glucose concentrations. Control of transition time versus control of flux

Control and Response Coefficients of transition time have been determined in a rat liver glycolytic system under different glucose concentrations. Results have been compared with the Flux Control and Flux Response Coefficients measured in the same conditions, showing that transition time and flux are different responses of the system, subject to different regulation and control. Control Coefficients of flux and transition time show a very different profile in each condition of glucose concentration assayed. Ratio of Flux Control coefficients of glucokinase over phosphofructokinase at 5 and 20 mM glucose concentration changes from 3.2 to 0.5, while the same ratio in the case of Transition Time Control Coefficients moves from 0.6 to 0.93. Moreover, the absolute values of Transition Time Control Coefficients in glycolytic conditions are one order of magnitude bigger than in gluconeogenic conditions. Values of Response Coefficients also show that the transition time has a bigger sensitivity to changes in glucose concentration than the flux in all conditions assayed, but particularly in glycolytic ones.     

The time and egg budget of Leptopilina clavipes, a parasitoid of larval Drosophila

Abstract.

• 1 For the understanding of the influence of natural selection on the persistence of host selection behaviour in populations of Drosophila parasitoids it is important to know whether parasitoids will become time- or egg-limited. We investigated whether the Drosophila parasitoid Leptopilina clavipes (Hartig) meets egg- or time-limited conditions in the field.
• 2 To this end the following aspects of the parasitoid's life were studied: egg load at emergence, travelling velocity between patches, patch residence times, oviposition rates and life expectancy. Together with the results from earlier studies on host and patch distributions, this formed the input of a ‘Monte Carlo’ simulation model, in which the life history of an individual parasitoid can be traced.
• 3 The simulations revealed that under the conditions found in the field 12.9% of the parasitoid population is egg-limited. The model was also run for a number of scenarios which reflect ‘good’ or ‘bad’ circumstances. In most cases a significant proportion of the parasitoid population proved to be egg-limited.
• 4 For the measurement of travelling velocities and patch residence times a marking method, especially applicable to small-sized parasitoids such as L.clavipes, is described. Marking did not affect survival, host habitat location or host detection rate. Parasitoids were found to be attracted to the odour of fruit-bodies of Phallus impudicus, the most important breeding substrate of their hosts.