Bafilomycin A1 activates HIF-dependent signalling in human colon cancer cells via mitochondrial uncoupling

Mitochondrial uncoupling is implicated in many patho(physiological) states. Using confocal live cell imaging and an optical O₂ sensing technique, we show that moderate uncoupling of the mitochondria with plecomacrolide Baf (bafilomycin A1) causes partial depolarization of the mitochondria and deep sustained deoxygenation of human colon cancer HCT116 cells subjected to 6% atmospheric O₂. A decrease in iO₂ (intracellular O₂) to 0–10 μM, induced by Baf, is sufficient for stabilization of HIFs (hypoxia inducible factors) HIF-1α and HIF-2α, coupled with an increased expression of target genes including GLUT1 (glucose transporter 1), HIF PHD2 (prolyl hydroxylase domain 2) and CAIX (carbonic anhydrase IX). Under the same hypoxic conditions, treatment with Baf causes neither decrease in iO₂ nor HIF-α stabilization in the low-respiring HCT116 cells deficient in COX (cytochrome c-oxidase). Both cell types display equal capacities for HIF-α stabilization by hypoxia mimetics DMOG (dimethyloxalylglycine) and CoCl₂, thus suggesting that the effect of Baf under hypoxia is driven mainly by mitochondrial respiration. Altogether, by activating HIF signalling under moderate hypoxia, mitochondrial uncoupling can play an important regulatory role in colon cancer metabolism and modulate adaptation of cancer cells to natural hypoxic environments.     

Modeling climate change impacts on overwintering bald eagles

Bald eagles (Haliaeetus leucocephalus) are recovering from severe population declines, and are exerting pressure on food resources in some areas. Thousands of bald eagles overwinter near Puget Sound, primarily to feed on chum salmon (Oncorhynchus keta) carcasses. We used modeling techniques to examine how anticipated climate changes will affect energetic demands of overwintering bald eagles. We applied a regional downscaling method to two global climate change models to obtain hourly temperature, precipitation, wind, and longwave radiation estimates at the mouths of three Puget Sound tributaries (the Skagit, Hamma Hamma, and Nisqually rivers) in two decades, the 1970s and the 2050s. Climate data were used to drive bald eagle bioenergetics models from December to February for each river, year, and decade. Bald eagle bioenergetics were insensitive to climate change: despite warmer winters in the 2050s, particularly near the Nisqually River, bald eagle food requirements declined only slightly (<1%). However, the warming climate caused salmon carcasses to decompose more rapidly, resulting in 11% to 14% less annual carcass biomass available to eagles in the 2050s. That estimate is likely conservative, as it does not account for decreased availability of carcasses due to anticipated increases in winter stream flow. Future climate-driven declines in winter food availability, coupled with a growing bald eagle population, may force eagles to seek alternate prey in the Puget Sound area or in more remote ecosystems.     

Cardiolipin and electron transport chain abnormalities in mouse brain tumor mitochondria: lipidomic evidence supporting the Warburg theory of cancer

Otto Warburg first proposed that cancer originated from irreversible injury to mitochondrial respiration, but the structural basis for this injury has remained elusive. Cardiolipin (CL) is a complex phospholipid found almost exclusively in the inner mitochondrial membrane and is intimately involved in maintaining mitochondrial functionality and membrane integrity. Abnormalities in CL can impair mitochondrial function and bioenergetics. We used shotgun lipidomics to analyze CL content and composition in highly purified brain mitochondria from the C57BL/6J (B6) and VM/Dk (VM) inbred strains and from subcutaneously grown brain tumors derived from these strains to include an astrocytoma and ependymoblastoma (B6 tumors), a stem cell tumor, and two microgliomas (VM tumors). Major abnormalities in CL content or composition were found in all tumors. The compositional abnormalities involved an abundance of immature molecular species and deficiencies of mature molecular species, suggesting major defects in CL synthesis and remodeling. The tumor CL abnormalities were also associated with significant reductions in both individual and linked electron transport chain activities. A mathematical model was developed to facilitate data interpretation. The implications of our findings to the Warburg cancer theory are discussed.     

Secondary production,longevity and resource consumption rates of freshwater shrimps in two tropical streams with contrasting geomorphology and food web structure

1. Freshwater shrimps often dominate the biomass of tropical island streams and are known to have strong effects on stream ecosystem structure and function, but little effort has been dedicated toward quantifying basic energetic and life history attributes such as growth, production and longevity. Such information is critical for understanding both the role of shrimps in ecosystem dynamics and the gravity of threats to shrimp populations posed by human activities such as shrimp harvesting, dam construction and water withdrawal. 2. We quantified growth rates and secondary production of dominant freshwater shrimps for 3 years in two Puerto Rican headwater streams that differ in food web structure because of the presence or absence of predatory fishes that are excluded from reaches above waterfalls. Using growth data, we constructed a minimum longevity model to explore the likely minimum life spans of the two dominant taxa (Atya spp. and Xiphocaris elongata). Finally, we used a bioenergetics model to quantify annual consumption rates of major basal resources by the two taxa. 3. Daily growth rates ranged from ?0.001 to 0.011 day^?1, were inversely related to body size, and were higher for small individuals of X. elongata than Atya spp. Mean annual shrimp biomass and secondary production were an order of magnitude higher in the stream that lacked predatory fishes (biomass: 4.34 g AFDM m^?2; production: 0.89 g AFDM m^?2 year^?1) than in the stream with predatory fishes (biomass: 0.12 g AFDM m^?2; production: 0.02 g AFDM m^?2 year^?1). Production : biomass ratios ranged from 0.01 to 0.38. 4. Our longevity model predicted a minimum life span of 8 years for Atya spp. and 5 years for X. elongata in the stream lacking predatory fishes. In contrast, due to a larger average size of X. elongata in the stream with predatory fishes, our model predicted a minimum life span of 11 years. Actual life spans of these taxa are likely to be much longer based on long‐term observations of marked individuals. 5. Estimated consumption rates from the bioenergetics model indicated that Atya spp. and X. elongata are important processors of organic matter resources in streams where they occur at high densities. Atya spp. and X. elongata appeared capable of consuming a large proportion of algal and insect production and the proportion of direct leaf litter inputs consumed was also appreciable (c. 40–60%). However, the consumption of suspended fine particulate organic matter (SFPOM) by Atya spp. is probably only a minor proportion of total SFPOM flux in these streams. 6. Our study suggests that geomorphic features such as waterfalls may play an important role in controlling the distribution and production of freshwater shrimps through their effects on predatory fish movement. Spatial differences in shrimp densities result in landscape‐scale variation in the significance to ecosystem processes of these long‐lived organisms, particularly as processors of major organic matter resources.     

Toward Quantifying the Relative Importance of Invertebrate Consumption and Bioturbation in Puerto Rican Streams

Although many tropical stream consumers have large effects on resource quantity and quality, little is known about the relative importance of consumption versus bioturbation. We quantified egestion rates of freshwater shrimps ( Atya spp. and Xiphocaris elongata ) and mayflies (Leptophlebiidae) in two forest streams within the Luquillo Experimental Forest, Puerto Rico. Consumer body size was a strong predictor of egestion rates, with mass-specific egestion rates declining with body size and per-individual egestion rates increasing with body size. We used these egestion rates, together with published rates of epilithon removal by consumers and epilithon accrual by particle deposition and periphytic growth ( i.e. , with and without consumer access), to estimate the importance of consumption and bioturbation after storm events and during base-flow conditions. Our estimates suggest that direct consumption of epilithon can only account for a minor proportion (< 5%) of material removed following storm events, with most removal likely resulting from bioturbation. During base-flow conditions, we found that consumers (largely shrimps) may be capable of consuming a significant proportion of the material that would otherwise accrue on benthic substrata, but this result was limited to one high-elevation site. Our study suggests that bioturbation is the dominant process that redistributes and entrains fine particles after storm events, and that a variable fraction of deposited and accrued benthic material may be consumed during base-flow conditions. Our results underscore the importance of tropical stream animals in altering the benthic environment through both consumption and bioturbation, and suggest that consumer-mediated material cycling is likely to be context dependent.     

The Na+-Translocating NADH:quinone Oxidoreductase (NDH I) from Klebsiella pneumoniae and Escherichia coli: Implications for the Mechanism of Redox-Driven Cation Translocation by Complex I

Eukaryotic complex I integrated into the respiratory chain transports at least 4 H⁺ per NADH oxidized. Recent results indicate that the cation selectivity is altered to Na⁺ in complex I (NDH I) isolated from the enterobacteria Escherichia coli and Klebsiella pneumoniae. A sequence analysis illustrates the characteristic differences of the enterobacterial, Na⁺-translocating NDH I compared to the H⁺-translocating complex I from mitochondria. Special attention is given to the membranous NuoL (ND5, Nqo12) subunits that possess striking sequence similarities to secondary Na⁺/H⁺ antiporters and are proposed to participate in Na⁺ transport. A model of redox-linked Na⁺ (or H⁺) transport by complex I is discussed based on the ion-pair formation of a negatively charged ubisemiquinone anion with a positively charged Na⁺ (or H⁺).     

Restoration of CA2+-inhibited oxidative phosphorylation in cardiac mitochondria by mitochondrial Ca2+ unloading

Mitochondria, the major source of cellular ATP, display high vulnerability to metabolic stress, in particular to excessive Ca²⁺ loading. Here, we show that Ca²⁺-inhibited mitochondrial ATP generation could be restored through stimulated Ca²⁺ discharge from mitochondrial matrix. This was demonstrated using a Ca²⁺ ionophore or through Na⁺/Ca²⁺ exchange-mediated decrease of mitochondrial Ca²⁺ load. Furthermore, diazoxide, a mitochondrial potassium channel opener, which maintained mitochondrial Ca²⁺ homeostasis, also restored Ca²⁺-inhibited ATP synthesis and preserved the structural integrity of Ca²⁺-challenged mitochondria. Thus, under conditions of excessive mitochondrial Ca²⁺ overload targeting mitochondrial Ca²⁺ transport pathways restores oxidative phosphorylation required for vital cellular processes. This study, therefore, identifies an effective strategy capable to rescue Ca²⁺-disrupted mitochondrial energetics.