Amylose chain behavior in an interacting context II. Molecular modeling of a maltopentaose fragment in the barley α‐amylase catalytic site

In the first paper of this series, the tools necessary to evaluate the consequences of glucopyranose ring deformations in terms of glycosidic torsion angle shifts, and amylose chain propagation have been created. In this second paper, the modeling of amylose fragments into the catalytic region of barley α‐amylase has been performed by a systematic approach. From the crystal data of the acarbose/amylase complex, maltotriose and maltopentaose fragments have been docked in the catalytic cleft. It has been found that for the trisaccharide, no substrate ring deformation is needed to respect stacking interactions (with Y51 and W206) characteristic of the substrate binding. However, for the pentasaccharide the deformations of rings A and C (from chair { C } toward half‐chair { H2 } and skew { S4 }, respectively) are essential conditions to fit this amylose fragment into the narrow catalytic site. Within five contiguous binding subsites, all important enzyme residues have been listed, which is of great importance for the understanding of the cleavage mechanism or any further biochemical modification. The best energy docking solution that was found is consistent with experimental data. © 1999 John Wiley & Sons, Inc. Biopoly 49: 107–119, 1999     

Variation in the leaping of lemurs

Locomotor diversity among lemurids has been ignored by placing most species into a category of arboreal quadrupeds. Recent field studies have shown that leaping behaviors comprise a relatively large amount of their travel. In this contribution I detail a study of captive lemurs locomoting on a designed support network and/or in outdoor enclosures. Associations between support context, leaping behaviors, and landing kinematics are detailed for Hapalemur griseus, Eulemur rubriventer, Eulemur fulvus, Eulemur mongoz, and Varecia variegata. In-air body position, including the amount and location of trunk flexion, coupled with the extent of shoulder and hip flexion dictates limb use at landing. Limb strike pattern when landing onto the same support type varies interspecifically. The kinematic variation in leaping behaviors may well have implications for functional analyses of the postcranium. © 1996 Wiley-Liss, Inc.     

Decoding defensive systems

Our understanding of the neuronal circuits and mechanisms of defensive systems has been primarily dominated by studies focusing on the contribution of individual cells in the processing of threat-predictive cues, defensive responses, the extinction of such responses and the contextual modulation of threat-related behavior. These studies have been key in establishing threat-related circuits and mechanisms. Yet, they fall short in answering long-standing questions related to the integrative processing of distinct threatening cues, behavioral states induced by threat-related events, or the bridging from sensory processing of threat-related cues to specific defensive responses. Recent conceptual and technical developments has allowed the monitoring of large populations of neurons, which in addition to advanced analytic tools, have improved our understanding of how collective neuronal activity supports threat-related behaviors. In this review, we discuss the current knowledge of neuronal population codes within threat-related networks, in the context of aversive motivated behavior and the study of defensive systems.     

Computational modeling and experimental validation of odor detection behaviors of classically conditioned parasitic wasp,Microplitis croceipes

A prototype chemical sensor named Wasp hound® that utilizes five classically conditioned parasitoid wasps, Microplitis croceipes (Cresson) (Hymenoptera: Braconidae), to detect volatile odors was successfully implemented in a previous study. To improve the odor‐detecting ability of Wasp Hound®, searching behaviors of an individual wasp in a confined area are studied and modeled through stochastic differential equations in this paper. The wasps are conditioned to 20 mg of coffee when associated with food and subsequently, tested to 5, 10, 20, and 40 mg of coffee. A stochastic model is developed and validated based on three positive behavioral responses (walking, rotation around odor source, and self‐rotation) from conditioned wasps at four different test dosages. The model is capable to reproducing the behaviors of conditioned wasps, and can be used to improve the ability of Wasp Hound® to assess changes in odor concentration. The model simulation results show the behaviors of conditioned wasps are significantly different when tested at different coffee dosages. We conjecture that the searching behaviors of conditioned wasps are based on the temporal and spatial neuron activity of olfactory receptor neurons and glomeruli, which are strongly correlated to the training dosages. The overall results demonstrate the utility of mathematical models for interpreting experimental observations, gaining novel insights into the dynamic behavior of classically conditioned wasps, as well as broadening the practical uses of Wasp Hound. © 2014 American Institute of Chemical Engineers Biotechnol. Prog., 31:596–606, 2015     

Positive and negative impact to decomposition of pig cadavers by ants (hymenoptera: Formicidae) at the Islet Yeongdo in Busan,South Korea

We observed how ants affected the decomposition process of pig cadavers. Experiments were carried out with six pig cadavers during three seasons without winter. Fifteen ant species belonging to 14 genera 3 subfamilies were recorded from pig cadavers. The species richness and species composition of ants were different significantly at bloated and decay stages from the remaining stages, regardless of season. Ant species Nylanderia flavipes, Aphaenogaster japonica, Pheidole fervida, and Ectomomyrmex javanus kept hunting a considerable amount of eggs and maggots of flies in the two stages. In particular, Lasius japonicus continually interrupted landing and ovipositing of flies and removed eggs and maggots from pig cadavers. Our observation suggests that ants may affect decomposition process of dead animals by participating in positive and negative ways by massive removal of eggs and maggots of flies.     

Activity pattern, reproductive behaviors and gonadal hormones in the raccoon dog (Nyctereutes procyonoides)

The objectives of this study were to (1) assess year-round behaviors and activity patterns of captive raccoon dogs (Nyctereutes procyonoides) and (2) characterize the species' reproductive endocrinology. Behaviors and activity patterns of 12 (5.7) animals were recorded over a 1-year period. During that time, fecal samples were collected 2-7 times/week from 16 (7.9) individuals (six of these were included in the behavioral study) for the analysis of testosterone, progesterone and estrogen metabolite concentrations. Activity pattern and excretion of gonadal steroids followed a seasonal pattern. Specifically, dogs were cathemeral in summer, and primarily nocturnal in winter. In the males, testosterone concentrations were at baseline from April through September, began to rise in October and reached peak concentrations in February (P<0.05). In the females, elevated estrogen (P<0.05) was observed in March followed by an increase in progestagen concentrations from March through May (P<0.05) in both pregnant and pseudopregnant animals. Gender significantly influenced monthly testosterone/estrogen ratio (P<0.01); values were higher in males than in females throughout the year with overall percentage of overlapping values between males and females being 28%. In summary, this study characterized cirannual fluctuations in behaviors and gonadal steroid metabolites in the raccoon dog maintained in captivity. Because there is no obvious sexual dimorphism, the differences in testosterone/estrogen ratio may be useful for gender differentiation (72% accuracy), especially among individuals living in the wild.     

Trinuclear-based coordination compounds of Mn(II) and Co(II) with 4-amino-3,5-dimethyl-1,2,4-triazole and azide and thiocyanate anions: Synthesis, structure and magnetic properties

A 2D layer complex 1 and a linear trinuclear complex 2 with mixed ligands have been synthesized and characterized by elemental analyses, IR and single-crystal X-ray diffraction. In 1, the Mn(II) ions are six-coordinated and lie in distorted octahedron coordination environments. Complex 1 is connected into a 2D layer structure based on a linear trinuclear Mn₃(admtrz)₄(N₃)₆ (admtrz = 4-amino-3,5-dimethyl-1,2,4-triazole) building unit with either (6,3) topology when Mn1 cations as three-connected nodes or (4,4) network when the coordination trinuclear units being regarded as four connected nodes. In 2, the Co(II) ions are in slightly distorted octahedron coordination geometries. The magnetic behaviors are investigated in the temperature range 1.8-300 K. The magnetic susceptibility measurements show that the Mn(II) ions of complex 1 are weakly antiferromagnetically coupled with g = 1.98(1), J1 = −6.31(5) cm⁻¹ and J2 = −1.88(1) cm⁻¹. There is dominant zero field splitting (ZFS) effects with g values, g_// = 2.38(2) and g_⊥ = 4.96(4), indicated a significant presence of the spin-orbit coupling and magnetization experiment reveals large, uniaxial zero-field splitting parameters of D = −29.55 cm⁻¹ for 2.     

Akt1 deficiency modulates reward learning and reward prediction error in mice

In contemporary reinforcement learning models, reward prediction error (RPE), the difference between the expected and actual reward, is thought to guide action value learning through the firing activity of dopaminergic neurons. Given the importance of dopamine in reward learning and the involvement of Akt1 in dopamine-dependent behaviors, the aim of this study was to investigate whether Akt1 deficiency modulates reward learning and the magnitude of RPE using Akt1 mutant mice as a model. In comparison to wild-type littermate controls, the expression of Akt1 proteins in mouse brains occurred in a gene-dosage-dependent manner and Akt1 heterozygous (HET) mice exhibited impaired striatal Akt1 activity under methamphetamine challenge. No genotypic difference was found in the basal levels of dopamine and its metabolites. In a series of reward-related learning tasks, HET mice displayed a relatively efficient method of updating reward information from the environment during the acquisition phase of the two natural reward tasks and in the reverse section of the dynamic foraging T-maze but not in methamphetamine-induced or aversive-related reward learning. The implementation of a standard reinforcement learning model and the Bayesian hierarchical parameter estimation show that HET mice have higher RPE magnitudes and that their action values are updated more rapidly among all three test sections in T-maze. These results indicate that Akt1 deficiency modulates natural reward learning and RPE. This study showed a promising avenue for investigating RPE in mutant mice and provided evidence for the potential link from genetic deficiency, to neurobiological abnormalities, to impairment in higher-order cognitive functioning.     

Estrous cycle effects on behavior of C57BL/6J and BALB/cByJ female mice: implications for phenotyping strategies

Systematic behavioral phenotyping of genetically modified mice is a powerful method with which to identify the molecular factors implicated in control of animal behavior, with potential relevance for research into neuropsychiatric disorders. A number of such disorders display sex differences, yet the use of female mice in phenotyping strategies has been a rare practice because of the potential variability related to the estrous cycle. We have now investigated the behavioral effects of the estrous cycle in a battery of behavioral tests in C57BL/6J and BALB/cByJ inbred strains of mice. Whereas the performance of BALB/cByJ female mice varied significantly depending on the phase of the estrous cycle in the open field, tail flick and tail suspension tests, the behavior of C57BL/6J females, with the exception of the tail suspension performance, remained stable across all four phases of the estrous cycle in all of the tests including open field, rotarod, startle reflex and pre-pulse inhibition, tail flick and hot plate. We also found that irrespective of the estrous cycle, the behavior of C57BL/6J females was different from that of BALB/cByJ groups in all of the behavioral paradigms. Such strain differences were previously reported in male comparisons, suggesting that the same inter-group differences can be revealed by studying female or male mice. In addition, strain differences were evident even for behaviors that were susceptible to estrous cycle modulations, although their detection might necessitate the constitution of large experimental groups.