Scalable production of adeno-associated virus type 2 vectors via suspension transfection

Vectors derived from adeno-associated virus type 2 (AAV2) are promising gene delivery vehicles, but it is still challenging to get the large number of recombinant adeno-associated virus (rAAV) particles required for large animal and clinical studies. Current transfection technology requires adherent cultures of HEK 293 cells that can only be expanded by preparing multiple culture plates. A single large-scale suspension culture could replace these multiple culture preparations, but there is currently no effective co-transfection scheme for generating rAAV from cells in suspension culture. Here, we weaned HEK 293 cells to suspension culture using hydrogel-coated six-well culture plates and established an efficient transfection strategy suitable for these cells. Then the cultures were gradually scaled up. We used linear polyethylenimine (PEI) to mediate transfection and obtained high transfection efficiencies ranging from 54% to 99%, thereby allowing efficient generation of rAAV vectors. Up to 10(13) rAAV particles and, more importantly, up to 10(11) infectious particles were generated from a 2-L bioreactor culture. The suspension-transfection strategy of this study facilitates the homogeneous preparation of rAAV at a large scale, and holds further potential as the basis for establishing a manufacturing process in a larger bioreactor.     

提高动物乳腺生物反应器表达水平的策略

在转基因动物乳腺生物反应器研究中,组织特异性表达水平、表达率和表达定位性是决定性的指标。因此,高效表达乳腺生物反应器的制备是许多研究者要实现的目标,也是走向产业化的基本要求。本文从基因构件、动物基因转移方面叙述了如何提高乳腺生物反应器表达水平、增强表达特异性及表达率,着重探讨如何提高动物乳腺生物反应器表达水平。     

β-TCP支架体外构建组织工程骨及其流体力学研究

骨髓基质干细胞在β-tricalciumphosphate(β-TCP)支架上分别进行了1、2和4周的三维动态培养,对支架上不同时间和部位的细胞面积/微孔面积及支架动态培养的流体环境进行了研究.研究表明,第1周细胞在支架大部分孔道内粘附生长并出现一定区域的单细胞层和多细胞层,第2周部分区域的部分孔道已填满了细胞并出现多细胞层,第4周大部分孔道几乎填满了细胞,主管道内壁出现了较多的细胞生长.同时发现,支架上各个区域细胞粘附面积不等,部分区域无细胞存在,有的部位2周后细胞逐渐减少.为了研究支架各个位置细胞増殖与流速、剪切应力的关系,建立了支架随机孔道结构的流体分析模型,通过支架上流速和剪切应力分布探讨实验中细胞分布现象的机理.结合计算和实验发现,流体能流到的部位几乎都有细胞生长,细胞生长较快的部位速度大多集中在0.24～0.53mm/s,剪切力大多在0.0050～0.023Pa,主管道底部及靠近进口的部位可能存在由于过大的剪切力影响细胞生长的区域.上述结果在一定程度上反映了细胞-支架-流体三者在成骨转化过程中的作用,对指导体外灌注培养的流量确定、灌注工艺及骨转化动力学研究有重要的意义.     

基因打靶方法制备乳腺生物反应器

基因打靶技术制备乳腺生物反应器,克服了显微注射法的众多缺陷,并随着第一例基因打靶家畜的诞生而成为这一研究领域的热点。本文从制备乳腺生物反应器过程中基因打靶策略、打靶细胞到打靶位点的选择等各个方面,详细分析了其中的技术难点、解决问题的对策、国内外研究进展以及应用前景。     

Sulfide oxidation at halo-alkaline conditions in a fed-batch bioreactor

A biotechnological process is described to remove hydrogen sulfide (H(2)S) from high-pressure natural gas and sour gases produced in the petrochemical industry. The process operates at halo-alkaline conditions and combines an aerobic sulfide-oxidizing reactor with an anaerobic sulfate (SO(4) (2-)) and thiosulfate (S(2)O(3) (2-)) reducing reactor. The feasibility of biological H(2)S oxidation at pH around 10 and total sodium concentration of 2 mol L(-1) was studied in gas-lift bioreactors, using halo-alkaliphilic sulfur-oxidizing bacteria (HA-SOB). Reactor operation at different oxygen to sulfide (O(2):H(2)S) supply ratios resulted in a stable low redox potential that was directly related with the polysulfide (S(x) (2-)) and total sulfide concentration in the bioreactor. Selectivity for SO(4) (2-) formation decreased with increasing S(x) (2-) and total sulfide concentrations. At total sulfide concentrations above 0.25 mmol L(-1), selectivity for SO(4) (2-) formation approached zero and the end products of H(2)S oxidation were elemental sulfur (S(0)) and S(2)O(3) (2-). Maximum selectivity for S(0) formation (83.3+/-0.7%) during stable reactor operation was obtained at a molar O(2):H(2)S supply ratio of 0.65. Under these conditions, intermediary S(x) (2-) plays a major role in the process. Instead of dissolved sulfide (HS(-)), S(x) (2-) seemed to be the most important electron donor for HA-SOB under S(0) producing conditions. In addition, abiotic oxidation of S(x) (2-) was the main cause of undesirable formation of S(2)O(3) (2-). The observed biomass growth yield under SO(4) (2-) producing conditions was 0.86 g N mol(-1) H(2)S. When selectivity for SO(4) (2-) formation was below 5%, almost no biomass growth was observed.     

Scale-up of naringinase production process based on the constant oxygen transfer rate for a novel strain of Bacillus methylotrophicus

Naringinase bioprocess based on Bacillus methylotrophicus was successfully scaled up based on constant oxygen transfer rate (OTR) as the scale-up criterion from 5-L bioreactor to 20-L bioreactor. OTR was measured in 5 and 20-L bioreactor under various operating conditions using dynamic method. The operating conditions, where complete dispersion was observed were identified. The highest OTR of 0.035 and 0.04?mMol/L/s was observed in 5 and 20-L bioreactor, respectively. Critical dissolved oxygen concentration of novel isolated strain B. methylotrophicus was found to be 20% of oxygen saturation in optimized medium. The B. methylotrophicus cells grown on sucrose had maximum oxygen uptake rate of 0.14?mMol/L/s in optimized growth medium. The cells produced the maximum naringinase activity of 751 and 778?U/L at 34?hr in 5 and 20-L bioreactors, respectively. The maximum specific growth rate of about 0.178/hr was observed at both the scales of operations. The maximum naringinase yield of 160 and 164?U/g biomass was observed in 5 and 20-L bioreactors, respectively. The growth and production profiles at both scales were similar indicating successful scale-up strategy for B. methylotrophicus culture.     

Development of novel carrier using natural zeolite and continuous ethanol fermentation with immobilized Saccharomyces cerevisiae in a bioreactor

A natural zeolite, easily vitrified and blown at 1300 °C with a high porosity and diam. of 5–100 m, was used to immobilize Saccharomyces cerevisiae at 3.6 × 10⁸ cells ml^–1 carrier. When the abilities of natural zeolite carrier were compared with glass beads, the capacity for immobilization and alcohol fermentation activity were, respectively, 2-fold higher and 1.2-fold higher than that of glass beads. Continuous alcohol fermentation was stable for over 21 d without breakage of the carrier.     

人canstatin基因转化新型生物反应器－杜氏盐藻(Dunaliella salina)的初步研究

本文采用RT-PCR技术从人的胎盘组织中克隆canstatin基因,定向连接到表达载体pUΩ上,然后与筛选标记bar盒连接得到真核表达载体pUΩ-Can-Bar。采用玻璃珠转化法将该表达载体转化杜氏盐藻（以下简称盐藻）,通过草丁膦固体平板筛选得到转化株,进而对转化株进行阳性鉴定。PCR结果显示,在盐藻转化株中均能够扩增出约700 bp特异的条带,而在阴性对照中没有扩增出该条带。Southern blot结果进一步证明人canstatin基因已经整合到盐藻细胞的基因组中。此外,本文对盐藻转化株的遗传稳定行进行了分析,结果表明canstatin基因能够在转化藻株中稳定遗传。人canstatin转基因盐藻株的成功制备为利用盐藻反应器大规模生产人canstatin蛋白提供了实验依据,为及早实现canstatin蛋白在治疗肿瘤上的临床应用提供了前期工作基础。     

工程菌种自动化高通量编辑与筛选研究进展

合成生物学(synthetic biology)与经典生物学研究的革命性区别之一是合成生物学能将生物实验的对象、方法、技术和流程高度标准化和模块化,创建出自动化与高通量的合成生物铸造模式。该模式通过复杂生物过程与自动化设施的结合,颠覆过往劳动密集型的研究范式,获得更高的技术迭代能力,极大促进了合成生物学的发展和产业化应用。值此天津工业生物技术研究所创立10周年之际,本文回顾了研究所在工业菌种自动化高通量编辑与筛选领域的系列重要工作进展,对基因克隆(gene cloning)、基因组编辑(genome editing)、编辑序列设计(editing sequence design)等生物技术的自动化实现,以及流式细胞、液滴微流控、全基因组规模扰动测序等高通量筛选技术进行了分析讨论,并展望了本领域未来的发展方向。望借此为创建具有自主知识产权的优秀菌种及其产业应用提供智能化、自动化和全链条覆盖的整体支撑能力。