The function of poly (ADP-ribosylation) in DNA breakage and rejoining

Poly (ADP-ribose) polymerase has an obligatory requirement for DNA strand-breaks in order to show full enzyme activity. Exposure of cells to DNA damaging agents activates this enzyme presumably through the production of DNA strand-breaks, either directly or via cellular enzymes. Recent evidence from manipulations of the cloned cDNA of this enzyme confirm the earlier evidence, obtained using enzyme inhibitors, that this enzyme is involved in DNA excision repair, probably at or near the ligation step. A very unusual human genetic disease has provided direct evidence for a link between the enzyme activities of poly (ADP-ribose) polymerase and of DNA ligase I. There is also some evidence that this enzyme may be involved in other cases of DNA breakage and rejoining, such as homologous and non-homologous DNA recombination, for example, in sister chromatid exchanges, in DNA transfection, in the intergration of retroviral proviral DNA and in variable antigen switching in African trypanosomes.     

The endemic molluscs of the Late Miocene Lake Pannon: their origin, evolution, and family-level taxonomy

Long-lived lakes are often sites of spectacular endemic radiations. During the Oligocene to recent history of the Paratethys, large, long-lived (more than a million years) lakes with endemic faunas formed three times, in three different basins: the first in the Pannonian basin, the second in the Euxinian (Black Sea) basin, and the third in the Caspian basin. Because the Euxinian lake inherited much of the fauna of Lake Pannon, the three lakes together hosted two endemic radiations of molluscs. The most long-lived lake in the region was Lake Pannon, which persisted approximately seven million years from the late Middle Miocene to the Early Pliocene. Lake Pannon was formed by isolation from the sea. Changes in hydrological regime and/or water chemistry in addition to the relative lowstand which accompanied (or caused) the isolation almost completely exterminated the restricted marine fauna of the basin. A few highly euryhaline and marginal marine cardiids, dreissenids, and hydrobiids survived this environmental change. As in other fossil and extant long-lived lakes, the originally low-diversity fauna radiated into a high number of related endemic species (‘species flocks’) and genera in the expanding and ecologically vacated lake. Many originally freshwater taxa (unionids, sphaeriids, viviparids, valvatids, melanopsids, lymnaeids, planorbids) entered the lake as well, and some of them also gave rise to endemic clades. Evolution in both relict and freshwater immigrant groups led to the appearance of highly unusual shell shapes. Many lineages exhibit gradual morphological changes over one to several million years. More than 900 endemic mollusc species have been described from Lake Pannon, although this number includes junior synonyms, invalid species names, and highly similar chronospecies. Applying a conservative taxonomy, all these species belong to four bivalve and eight gastropod families. The high degree of endemism, however, is reflected by proposals of some authors to establish as many as five new families based on Lake Pannon endemics.     

Phylogenetic reconstruction and phenetic taxonomy

Cladistic analysis should not be equated with phylogenetic reconstruc Instead it is a means of describing character-state distributions among organisms and in this it resembles phenetic analysis. However, the claim that cladistic methods meet phenetic ('Gilmour-natural') criteria for classification as well as or better than traditional phenetic ones is shown to be based on an inadequate interpretation of these criteria. Instead, a new measure of naturalness is proposed in which the most natural classification is that which describes the distribution of all character states by the smallest number of statements. The possibility of extending this measure to provide a criterion for an optimally simple classification is noted. It is concluded that phylogenetic reconstruction must not only reflect the branching patterns suggested by cladistic analysis but also take account of the tionary history that is reflected in an optimal phenogram.     

New hymenopteran insects (Insecta: Vespida) from the lower or middle Jurassic of India

Hymenopterans Xyelula alexandri Rasnitsyn, sp. nov. (Sepulcidae) and Kotaphialtites frankmortoni Rasnitsyn, gen. et sp. nov. (Ephialtitidae) are described from the Lower or Middle Jurassic Kota Formation, Andhra Pradesh, India. These finds prove a considerable similarity between the Gondwanan and Laurasian hymenopteran faunas during the Jurassic, as well as during the Triassic and Cretaceous.     

Phylogeography of the Iberian populations of Mioscirtus wagneri (Orthoptera: Acrididae), a specialized grasshopper inhabiting highly fragmented hypersaline environments

Phylogeographic studies from western Palaearctic have generally focused on species able to disperse and track their emerging suitable habitats after the last ice age. However, data on species whose biogeographical histories differ from this bulk of Palaearctic fauna are scarce. This is clearly the case of some specialized organisms inhabiting inland hypersaline environments, which are likely to have had a wider distribution range during the late Tertiary and may have persisted through the Pleistocene to the present day only constituting relict populations. In this study, we use partial sequences from two mitochondrial genes [16S rRNA (16S) and cytochrome oxidase subunit II (COII)] to investigate the phylogeography of the Iberian populations of Mioscirtus wagneri (Orthoptera: Acrididae), a specialized grasshopper exclusively inhabiting hypersaline low grounds. Our results show that M. wagneri exhibits a marked phylogeographical structure, forming three main clades which correspond with populations located in north-east, central–south-east and south-west Iberia. These geographical areas did not share any haplotype, indicating that gene flow between them is absent. Nested clade analyses revealed that these lineages have probably evolved in allopatry and data on sequence divergence suggest population fragmentation from the Early Pleistocene. Overall, these results provide a broader perspective on the contribution of historical climate/geological events to biogeographical patterns of organisms currently forming relict populations of great conservation concern.  © 2009 The Linnean Society of London, Biological Journal of the Linnean Society , 2009, 97 , 623–633.     

Taxonomic diversity of the terrestrial bird and mammal fauna in temperate and boreal biomes of the northern hemisphere

Abstract. Using comprehensive range information of northern Hemisphere birds and mammals, we assessed the taxonomic diversity of these two groups in four different regions: Europe, east Asia, and western and eastern North America. East Asia is the richest region in the number of bird and mammal species, genera, families and orders, except that mammal species richness is highest in western North America. Eastern North America is taxonomically the poorest region, but when only forest-associated taxa were considered in mammals taxonomic diversity is equally low in Europe and in eastern North America, and in birds, Europe is the least diverse region. Patterns in endemic taxa follow overall taxonomic diversity. The proportion of shared taxa between regions is higher among boreal species and genera than among all taxa. A comparison with tree species diversity underpins the role of east Asia as the most diverse of all northern biota. Largely congruent patterns at different taxonomic levels emphasizes the role of historical processes, such as differential extinction rate in response to paleoenvironmental fluctuations, in producing these patterns, but we stress the need for more research on the coevolution of species diversity and habitat diversity.     

Structure and composition of benthic macroinvertebrates of a tropical forest stream, River Nyamweru, western Uganda

Benthic invertebrates from River Nyamweru, a tropical forest stream in western Uganda were sampled bimonthly between April and December 1997 using a modified Hess Sampler. A total of 3708 benthic fauna from thirteen taxonomic orders were collected. Benthic samples were dominated by Diptera (mainly Chironomidae) representing over 60% of all the organisms, followed by Ephemeroptera. Benthic invertebrate densities ranged from 63 ± 9.03 organisms/m² to 300 ± 33.36 organisms/m², with higher densities occurring during the dry season and lower densities during the wet season. The benthic community structure in River Nyamweru reflected mainly collectors and scrapers as the most important groups (83%), while predators were very rare (3.1%). River discharge influenced benthic abundance, with more invertebrates at lower discharge and fewer invertebrates at higher discharge. The applicability of the River Continuum Concept to tropical forest stream situation is discussed.     

Notes onConocybe (Bolbitiaceae)

The mycological exploration of the Viennese nature preserve Lobau, resulted in the discovery of several new species ofBasidiomycetes; of special interest is the genusConocybe of which the authors present two new taxa:C. lobauensis andC. leporina var.tetraspora. FurthermoreC. neoantipus, C. striatipes andC. caespitosa are discussed, and the new varietiesC. neoantipus var.tucumana and var.carinthiaca as well asC. striatipes var.sejuncta are proposed.