Dispersal of the nuclear polyhedrosis virus of Neodiprion sertifer from soil to pine foliage with dust

Inclusion bodies (PIB) of nuclear polyhedrosis viruses (NPV) remain infectious for long periods in forest soils, but their transfer from soil to foliage is not well understood. Two instances of dispersal of the NPV of Neodiprion sertifer (Fourcroy) (Hymenoptera: Diprionidae) by dust are reported. The distributioo of diseased larval colonies in a young Scots pine stand indicated that dust caused by logging during winter could have started an epizootic. At another site there was a higher frequency of infected colonies near a forest road than further into the stand. The dust transmission hypothesis was tested by bioassays of road surface material and of samples of airborne dust collected on membrane filters. Both soil and air samples contained viable PIBs. Thus, virus dispersal with dust provided a likely explanation for the observed distributions of diseased larval colonies.

---

Zusammenfassung Mortalität von N.sertifer Larven durch das wirtsspezifische Kernpolyedervirus ist zwischen den Massenvermehrungen der Sägewespe selten. Eine ständige Infektionskette bleibt nicht erhalten. Das einzige bekannte Reservoir von Virusinoculum zwischen den Massenvermehrungen ist der Waldboden. Die Übertragung von Virus vom Boden auf Kiefernnadeln wird als seltenes Ereignis betrachtet. Sie dürfte häufiger sein, wenn die bodenbedeckende Vegetation gestört ist. Es wird von zwei Studien berichtet, in denen offenbar NPV in windverfrachtetem Staub die Krankheit bei Larven verursachte.In einem jungen Bestand schottischer Kiefer, in dem keine neueren Meldungen von Virusauftreten vorlagen, wurden Proben genommen. Die Proben stammten aus verschiedenen Distanzen von einem ausgewachsenen, im vorherigen Winter gefällten Bestand. Die Befallsintensität sank hier scharf ab mit zunehmender Distanz vom Rand.Ferner wurde der Krankheitsbefall in Larvenkolonien an kleinen Bäumen nahe einer schmalen Forst-strasse und an Bäumen im Bestandesinnern untersucht: In Strassennähe war der Befall höher. Luftmuster wurden nahe der Strasse durch Membranfiltern gesaugt und in einem Biotest auf Virus untersucht. Wenn die Strassenoberfläche ungestört war, wurde kein Virus festgestellt. Wurde Staub aufgewirbelt, konnten infektiöse PIBs gefunden werden. Material von der Strassenoberfläche hatte eine hohe Virusaktivität.Die Übertragung des Virus vom Boden auf Kiefernnadeln dürfte demnach wichtig sein, um Krankheitsausbrüche auszulösen. Die beschriebenen Störungen waren vom Menschen verursacht. Ähnliches könnte sich unter andern Umständen ereignen, z.B. bei Windfall oder bei der Aktivität grösserer Tiere.

     

Comparative study about airborne spores in Cagliari and Perugia

Summary A comparative study was carried in two Italian cities: Cagliari and Perugia. Ninetten fungal genera were assessed in both stations. Some were the same airborne spores, while others were characteristic of the areas. From an analysis of the linear regression coefficients between the concentration of four fungal genera and some meteorological parameters both in Cagliari and Perugia, a highly significative positive correlation could be seen between the presence of airborneCladosporium spores and both mean and maximum temperature. The same significative correlations were obtained both in Cagliari and Perugia forDrechslera/Helminthosporium.     

Estimation of big sagebrush leaf area index with terrestrial laser scanning

Accurate monitoring and quantification of the structure and function of semiarid ecosystems is necessary to improve carbon and water flux models that help describe how these systems will respond in the future. The leaf area index (LAI, m² m⁻²) is an important indicator of energy, water, and carbon exchange between vegetation and the atmosphere. Remote sensing techniques are frequently used to estimate LAI, and can provide users with scalable measurements of vegetation structure and function. We tested terrestrial laser scanning (TLS) techniques to estimate LAI using structural variables such as height, canopy cover, and volume for 42 Wyoming big sagebrush (Artemisia tridentata subsp. wyomingensis Beetle & Young) shrubs across three study sites in the Snake River Plain, Idaho, USA. The TLS-derived variables were regressed against sagebrush LAI estimates calculated using specific leaf area measurements, and compared with point-intercept sampling, a field method of estimating LAI. Canopy cover estimated with the TLS data proved to be a good predictor of LAI (r² = 0.73). Similarly, a convex hull approach to estimate volume of the shrubs from the TLS data also strongly predicted LAI (r² = 0.76), and compared favorably to point-intercept sampling (r² = 0.78), a field-based method used in rangelands. These results, coupled with the relative ease-of-use of TLS, suggest that TLS is a promising tool for measuring LAI at the shrub-level. Further work should examine the structural measures in other similar shrublands that are relevant for upscaling LAI to the plot-level (i.e., hectare) using data from TLS and/or airborne laser scanning and to regional levels using satellite-based remote sensing.     

夏季故宫养心殿空气中真菌的调查与分析

【目的】在无法实现洁净环境的古建筑内,文物易遭受霉菌的破坏,尤其是在闷热的夏季。探明空气中真菌的种类对文物、游客的安全具有重要意义。【方法】采用自然沉降法与撞击法对夏季养心殿正殿内代表性的6个取样位置的气生真菌进行培养并进行ITS1 rDNA序列分析。【结果】利用自然沉降法测得气生真菌22种,以枝孢属(Cladosporium)、曲霉属(Aspergillus)和青霉属(Penicillium)为优势类群,在2个位置(佛堂二层与西暖阁)空气真菌污染超标;而撞击法测得100余种,腐生营养型真菌比例较高,优势类群为链格孢属(Alternaria)、Cladosporium、木霉属 (Trichoderma)、根霉属(Rhizopus)、Aspergillus和Penicillium,所有6个位置均超标。通过对环境因子与真菌多样性的相关性分析发现,养心殿内真菌丰度与温度、湿度及悬浮颗粒物有着密切关系。在相对湿度较低的6月,温度对丰度影响较大;高湿度时,悬浮颗粒物与湿度对真菌丰度影响更大。丝状真菌的丰度与小粒径悬浮颗粒物、相对湿度存在显著正相关,而空气中的酵母菌与温度相关性更高。【结论】本研究对养心殿正殿空气中真菌的种属进行了鉴定,并分析了与环境因子的相关性,为预防、开放展览以及修缮提供了科学依据。     

Local and regional scale habitat heterogeneity contribute to genetic adaptation in a commercially important marine mollusc (Haliotis rubra) from southeastern Australia

Characterising adaptive genetic divergence among conspecific populations is often achieved by studying genetic variation across defined environmental gradients. In marine systems this is challenging due to a paucity of information on habitat heterogeneity at local and regional scales and a dependency on sampling regimes that are typically limited to broad longitudinal and latitudinal environmental gradients. As a result, the spatial scales at which selection processes operate and the environmental factors that contribute to genetic adaptation in marine systems are likely to be unclear. In this study we explore patterns of adaptive genetic structuring in a commercially‐ harvested abalone species (Haliotis rubra) from southeastern Australia, using a panel of genome‐wide SNP markers (5,239 SNPs), and a sampling regime informed by marine LiDAR bathymetric imagery and 20‐year hindcasted oceanographic models. Despite a lack of overall genetic structure across the sampling distribution, significant genotype associations with heterogeneous habitat features were observed at local and regional spatial scales, including associations with wave energy, ocean current, sea surface temperature, and geology. These findings provide insights into the potential resilience of the species to changing marine climates and the role of migration and selection on recruitment processes, with implications for conservation and fisheries management. This study points to the spatial scales at which selection processes operate in marine systems and highlights the benefits of geospatially‐informed sampling regimes for overcoming limitations associated with marine population genomic research.     

Convergent structural responses of tropical forests to diverse disturbance regimes

Size frequency distributions of canopy gaps are a hallmark of forest dynamics. But it remains unknown whether legacies of forest disturbance are influencing vertical size structure of landscapes, or space-filling in the canopy volume. We used data from LiDAR remote sensing to quantify distributions of canopy height and sizes of 434 501 canopy gaps in five tropical rain forest landscapes in Costa Rica and Hawaii. The sites represented a wide range of variation in structure and natural disturbance history, from canopy gap dynamics in lowland Costa Rica and Hawaii, to stages and types of stand-level dieback on upland Mauna Kea and Kohala volcanoes. Large differences in vertical canopy structure characterized these five tropical rain forest landscapes, some of which were related to known disturbance events. Although there were quantitative differences in the values of scaling exponents within and among sites, size frequency distributions of canopy gaps followed power laws at all sites and in all canopy height classes. Scaling relationships in gap size at different heights in the canopy were qualitatively similar at all sites, revealing a remarkable similarity despite clearly defined differences in species composition and modes of prevailing disturbance. These findings indicate that power-law gap-size frequency distributions are ubiquitous features of these five tropical rain forest landscapes, and suggest that mechanisms of forest disturbance may be secondary to other processes in determining vertical and horizontal size structure in canopies.     

Estimation of effective plant area index for South Korean forests using LiDAR system

Light Detection and Ranging (LiDAR) systems can be used to estimate both vertical and horizontal forest structure. Woody components, the leaves of trees and the understory can be described with high precision, using geo-registered 3D-points. Based on this concept, the Effective Plant Area Indices (PAI_e) for areas of Korean Pine (Pinus koraiensis), Japanese Larch (Larix leptolepis) and Oak (Quercus spp.) were estimated by calculating the ratio of intercepted and incident LIDAR laser rays for the canopies of the three forest types. Initially, the canopy gap fraction (G _LiDAR ) was generated by extracting the LiDAR data reflected from the canopy surface, or inner canopy area, using k-means statistics. The LiDAR-derived PAI_e was then estimated by using G _LIDAR with the Beer-Lambert law. A comparison of the LiDAR-derived and field-derived PAI_e revealed the coefficients of determination for Korean Pine, Japanese Larch and Oak to be 0.82, 0.64 and 0.59, respectively. These differences between field-based and LIDAR-based PAI_e for the different forest types were attributed to the amount of leaves and branches in the forest stands. The absence of leaves, in the case of both Larch and Oak, meant that the LiDAR pulses were only reflected from branches. The probability that the LiDAR pulses are reflected from bare branches is low as compared to the reflection from branches with a high leaf density. This is because the size of the branch is smaller than the resolution across and along the 1 meter LIDAR laser track. Therefore, a better predictive accuracy would be expected for the model if the study would be repeated in late spring when the shoots and leaves of the deciduous trees begin to appear.     

Complete genome sequence of Intrasporangium calvum type strain (7 KIP)

Intrasporangium calvum Kalakoutskii et al. 1967 is the type species of the genus Intrasporangium, which belongs to the actinobacterial family Intrasporangiaceae. The species is a Gram-positive bacterium that forms a branching mycelium, which tends to break into irregular fragments. The mycelium of this strain may bear intercalary vesicles but does not contain spores. The strain described in this study is an airborne organism that was isolated from a school dining room in 1967. One particularly interesting feature of I. calvum is that the type of its menaquinone is different from all other representatives of the family Intrasporangiaceae. This is the first completed genome sequence from a member of the genus Intrasporangium and also the first sequence from the family Intrasporangiaceae. The 4,024,382 bp long genome with its 3,653 protein-coding and 57 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.     

Isolation of clinically relevant fungal species from solid waste and environment of dental health services

Aims: This study was undertaken to detect, identify and determine antifungal susceptibility of yeast strains isolated from dental solid waste and to evaluate airborne fungi in the Brazilian dental health care environment and in the waste storage room. Methods and Results: A group of 17 yeast strains were identified by macroscopic and microscopic characteristics, API 20C Aux system and Multiplex PCR. All 104 airborne fungal colonies were identified by macroscopic and microscopic morphology. The CLSI broth microdilution method was utilized as the susceptibility test. Candida parapsilosis was the prevailing yeast species recovered from waste, followed by Rhodotorula glutinis. Three strains of Candida guilliermondii presented minimal inhibitory concentration values considered to be susceptible dose dependent (2 μg ml^?1) to voriconazole. Of all airborne fungal species, 69% were recovered from the waste storage room and 31% were recovered from the clinical/surgical environment. Most of them were identified as Cladosporium spp. Conclusions: These findings reinforce the potential risk of waste handling and point out the need for safe management to minimize the spread of these agents to the environment. Filamentous fungi isolation in almost all sampled environments indicates that a periodic monitoring of airborne microbiota in the dental health care service environment is required. Significance and Impact of the Study: The survival of yeast strains for 48 h suggests that dental waste should be carefully controlled and monitored.     

Isolation and identification of indoor airborne fungal contaminants of food production facilities and warehouses in Bursa, Turkey

In this study, we aimed at the isolation and identification of indoor airborne fungal contaminants of 16 different food production facilities and warehouses located in Bursa province (Turkey). Numbers and kinds of microfungi were investigated by exposing a Petri dish of malt extract agar medium for 15 minutes and then counting the number of colonies which develop. Sampling procedure for microfungi was performed 8 times at an interval of 45 days between Dec. 1st 1995--Oct. 15th 1996. A total of 3152 colonies was counted on 864 petri plates in a one year period. As a result, 63 mould species and 4 varieties belonging to 20 genera were isolated by means of pure culture methods. Of these, 7 species and 1 variety belonging to Aspergillus and Penicillium genera are new records for Turkey.