Hypothesis testing for the genetic background of quantitative traits

The testing of Bayesian point null hypotheses on variance component models have resulted in a tough assignment for which no clear and generally accepted method exists. In this work we present what we believe is a succeeding approach to such a task. It is based on a simple reparameterization of the model in terms of the total variance and the proportion of the additive genetic variance with respect to it, as well as on the explicit inclusion on the prior probability of a discrete component at origin. The reparameterization was used to bypass an arbitrariness related to the impropriety of uninformative priors onto unbounded variables while the discrete component was necessary to overcome the zero probability assigned to sets of null measure by the usual continuous variable models. The method was tested against computer simulations with appealing results.     

The inheritance of modifiers conferring self-fertility in the partially self-incompatible perennial, Campanula rapunculoides L. (Campanulaceae)

The role of partial self-incompatibility in plant breeding system evolution has received little attention. Here, we examine the genetic basis of modifiers conferring self-fertility in the creeping bellflower, Campanula rapunculoides L. (Campanulaceae), a partially self-incompatible herb. A survey of 35 individuals from two natural populations indicates that 45% of them are strongly self-incompatible, 40% intermediately self-incompatible, and 15% weakly self-incompatible and that some plants show a strong breakdown in self-incompatibility over floral age. We generated 101 F1 families by random crossing among 31 parental plants and estimated the heritability of self-fertility in day 1 and day 4 female-phase flowers, the genetic correlation between day 1 and day 4 self-fertility, and the coefficient of additive genetic variance of self-fertility. We use linear regression and data from additional crosses to examine whether there are significant maternal effects in the expression of self-fertility. We use Fain's test to determine if a major gene influences self-fertility and, finding no evidence, use data from additional crosses on an F2 generation to estimate the mean number and dominance of genes conferring self-fertility. These analyses indicate that the heritability (h2) of self-fertility is 0.24 in day 1 female-phase flowers and 0.44 in day 4 flowers, self-fertility is primarily additive but shows some recessive effects, and self-fertility is estimated to be controlled by four genetic factors. In addition, we have evidence that there may be maternal effects for self-fertility, especially for weakly self-incompatible plants. The significance of these results in the context of mating system evolution is discussed.     

Reproductive Parameters and Maternal Investment in Mandrills (Mandrillus sphinx)

We report on 14 years of reproductive data for semifree-ranging mandrills (Mandrillus sphinx) in Gabon, and we explore relationships between female rank, age and parity, and reproductive strategies. Most births (61% of 132) occurred during the wet season in Gabon, between January and March. Female rank and parity were unrelated to the timing of parturition. Gestation lengths average 175 days (SE = ±1 day; N = 61) and were similar irrespective of female rank, parity, or sex of offspring. Birth sex ratio did not differ significantly from unity (52% male), and was unrelated to maternal rank or parity. Stillbirths and neonatal mortality tended to be more common among lower-ranking females than among either mid-ranking or dominant females. Median age at first birth is 4.71 years, at a median body mass of 7.6 kg, ca 5 years before females attain their adult body mass (median 12 kg). Age at first reproduction is significantly correlated with dominance rank, with dominant females giving birth on average 1.3 years earlier than lower-ranking females do. Interbirth intervals (IBI) average 405 days (range 184–1159 days, N = 103), and are independent of the sex of the offspring. Infant death within 6 months shortened IBI to 305 days. Increasing age and parity are also associated with short IBI, as is higher rank. Maternal rank and parity appear to influence reproductive success in female mandrills, but there is no apparent differential maternal investment by sex.     

Populational Heritability: Extending Punnett Square Concepts to Evolution at the Metapopulation Level

In a previous study, using experimental metapopulations of the flour beetle, Tribolium castaneum, we investigated phase III of Wright's shifting balance process (Wade and Griesemer 1998). We experimentally modeled migration of varying amounts from demes of high mean fitness into demes of lower mean fitness (as in Wright's characterization of phase III) as well as the reciprocal (the opposite of phase III). We estimated the meta-populational heritability for this level of selection by regression of offspring deme means on the weighted parental deme means.Here we develop a Punnett Square representation of the inheritance of the group mean to place our empirical findings in a conceptual context similar to Mendelian inheritance of individual traits. The comparison of Punnett Squares for individual and group inheritance shows how the latter concept can be rigorously defined and extended despite the lack of explicitly formulated, simple Mendelian laws of inheritance at the group level. Whereas Wright's phase III combines both interdemic selection and meta-populational inheritance, our formulation separates the issue of meta-populational heritability from that of interdemic selection. We use this conceptual context to discuss the controversies over the levels of selection and the units of inheritance.     

Effects of size and fluctuating asymmetry on field fitness of the parasitoid Trichogramma carverae (Hymenoptera: Trichogrammatidae)

1. The effects of body size and asymmetry in morphological traits on field fitness were studied in the parasitoid Trichogramma carverae .
2. Significant fluctuating asymmetry was detected in four bristle counts and two wing measurements made on forewings. There was no evidence for directional asymmetry in any of the traits. An estimate of field fitness was obtained in grapevines by collecting released wasps arriving at oviposition sites consisting of egg rafts of the tortricid Epiphyas postvittana .
3. Comparisons of ovipositing and emergence samples indicated that wasps at oviposition sites were relatively larger and more variable in their size distribution. A non-parametric analysis of the relationship between fitness and size indicated that extremely large wasps had the highest fitness and suggested that small as well as large wasps may have had a fitness advantage.
4. For asymmetry, the only trait showing an association with field fitness was wing length. Wasps with a low length asymmetry were more likely to be collected at oviposition sites, although fitness curves indicated that wasps had a similar fitness once an intermediate length asymmetry was exceeded.
5. Mother–daughter comparisons for wasps from a genetically heterogeneous stock provided no evidence that size measures or asymmetries were heritable when wasps were reared on a factitious host.
6. These findings have implications for improving parasitism rates in inundative releases.     

Environmental influences on fecundity, egg viability and egg cannibalism in the scale insect predator, Chilocorus nigritus

The effects of temperature on age-specific fecundity, egg viability and egg cannibalism were examined in the coccidophagous coccinellid, Chilocorus nigritus being fed on the cyanophyllum scale, Abgrallaspis cyanophylli. There were no significant differences in lifetime fecundity or oviposition rate at constant temperatures in the range of 20 to 30°C although there was a trend for both parameters to increase with increasing temperatures. Total fecundity ranged from five to 1890 eggs per female whilst the oviposition rate varied from 0.2–12.1 eggs day^-1. Egg viability was significantly greater at 26 and 30°C (63 and 74%, respectively) than at lower temperatures (18 to 30%) whilst egg cannibalism was highest at 24 and 26°C (being the mid range of the temperatures tested). Mean pre-oviposition periods varied from 54 days at 20°C to 8.2 days at 30°C. The effect of relative humidities in the range of 33% to 75% on oviposition rate, egg viability and egg cannibalism was measured and found to have no significant effect on either parameter.     

Predicting adaptation of phenology in response to climate change, an insect herbivore example

Climate change has led to an advance in phenology in many species. Synchrony in phenology between different species within a food chain may be disrupted if an increase in temperature affects the phenology of the different species differently, as is the case in the winter moth egg hatch–oak bud burst system. Operophtera brumata (winter moth) egg hatch date has advanced more than Quercus robur (pedunculate oak) bud burst date over the past two decades. Disrupted synchrony will lead to selection, and a response in phenology to this selection may lead to species genetically adapting to their changing environment. However, a prerequisite for such genetic change is that there is sufficient genetic variation and severe enough fitness consequences. So far, examples of observed genetic change have been few. Using a half-sib design, we demonstrate here that O. brumata egg-hatching reaction norm is heritable, and that genetic variation exists. Fitness consequences of even a few days difference between egg hatch and tree bud opening are severe, as we experimentally determined. Estimates of genetic variation and of fitness were then combined with a climate scenario to predict the rate and the amount of change in the eggs' response to temperature. We predict a rapid response to selection, leading to a restoration of synchrony of egg hatch with Q. robur bud opening. This study shows that in this case there is a clear potential to adapt – rapidly – to environmental change. The current observed asynchrony is therefore not due to a lack of genetic variation and at present it is unclear what is constraining O. brumata to adapt. This kind of model may be particularly useful in gaining insight in the predicted amount and rate of change due to environmental changes, given a certain genetic variation and selection pressure.     

Combined effects of chemical and visual information in eliciting antipredator behaviour in juvenile Atlantic salmon Salmo salar

Under natural conditions, both young-of-the-year (YOY; 0+ year) and parr (1+ year) Atlantic salmon Salmo salar exhibited strong antipredator behaviour ( e.g. increase in latency to resume foraging) following the exposure to damage-released chemical alarm cues relative to a stream water control. Subsequent exposure to a novel visual stimulus had contrasting results. Parr increased their reactive distance to the visual stimulus if they had been previously exposed to a chemical alarm cue, whereas YOY did not. On the other hand, both YOY and parr took significantly longer to resume foraging when exposed to a visual stimulus if they had been previously exposed to a chemical alarm cue than control groups. While YOY and parr differed in the type and intensity of antipredator responses to both chemical and visual stimuli, perhaps due to differential costs and benefits associated with age, both used the chemical and the visual information in a combined manner.