Determination of seed viability of eight wild Saudi Arabian species by germination and X-ray tests

Our purpose was to evaluate the usefulness of the germination vs. the X-ray test in determining the initial viability of seeds of eight wild species (Salvia spinosa, Salvia aegyptiaca, Ochradenus baccatus, Ochradenus arabicus, Suaeda aegyptiaca, Suaeda vermiculata, Prosopisfarcta and Panicumturgidum) from Saudi Arabia. Several days were required to determine viability of all eight species via germination tests, while immediate results on filled/viable seeds were obtained with the X-ray test. Seeds of all the species, except Sa.aegyptiaca, showed high viability in both the germination (98–70% at 25/15 °C, 93–66% at 35/25 °C) and X-ray (100–75%) test. Furthermore, there was general agreement between the germination (10% at 25/15 °C and 8% at 35/25 °C) and X-ray (5%) tests that seed viability of Sa.aegyptiaca was very low, and X-ray analysis revealed that this was due to poor embryo development. Seeds of P.farcta have physical dormancy, which was broken by scarification in concentrated sulfuric acid (10 min), and they exhibited high viability in both the germination (98% at 25/15 °C and 93% at 35/25 °C) and X-ray (98%) test. Most of the nongerminated seeds of the eight species except those of Sa.aegyptiaca were alive as judged by the tetrazolium test (TZ). Thus, for the eight species examined, the X-ray test was a good and rapid predictor of seed viability.     

贵州葡萄属野生种光合特性的研究

为掌握野生葡萄种间和种内不同单株间的光合特性差异,利用Li-6400便携式光合测定系统测定了7种野生葡萄25个单株的光合参数.结果表明:野生葡萄种间光合特性差异明显,美丽葡萄净光合速率最高,其次是刺葡萄,腺枝葡萄的净光合速率最低.野生葡萄种内不同单株间的光合指标多样性丰富,单株间光合特性差异最大的是葛藟葡萄;种内不同单株间原产地气候条件相似,其光合特性差异较小,而原产地气候差异大的单株光合特性差异也大;野生葡萄的光合速率调控机制多样,非气孔因素调控在野生葡萄种群内非常普遍.     

Modifications to a molt‐based ageing system proposed by Wolfe et al. (2010)

ABSTRACT Wolfe et al. (2010 . Journal of Field Ornithology 81: 186–194) proposed a coding system for ageing birds based on the sequence of molts and plumages, which is more practical than a calendar‐based system, especially in tropical and southern latitudes where species often breed across 1 January. The Wolfe–Ryder–Pyle (hereafter, W–R–P) three‐letter system is based on recognition of molt cycle (first, second, third, definitive, and so on) and plumage phase (juvenile, supplemental, formative, alternate, and basic). For example, a bird in First Cycle Formative plumage is coded as FCF. We propose the use of two additional code options that further refine age brackets. First, we suggest the use of an “after” or “A” code in place of the “C,” or cycle code, where an earlier molt cycle or plumage can be ruled out. For example, a bird that exhibits Staffelmauser might be aged as after‐third cycle basic, or TAB. Second, we suggest using “pre” or “P” in place of the “C,” or cycle code, when birds are actively molting, such as for birds undergoing the second prebasic molt or SPB. For both codes, we discuss their applicability using examples based on actual banding data. Our proposed codes will improve the utility of the W–R–P system by better refining age brackets and by expanding its applicability to a diverse array of taxa.     

Genetic and epigenetic instabilities induced by tissue culture in wild barley (<Emphasis Type="Italic">Hordeum brevisubulatum</Emphasis> (Trin.) Link)

A simple tissue culture protocol was developed for efficient plant regeneration from young inflorescence-derived calli in wild barley, Hordeum brevisubulatum (Trin.) Link, an important pasturage grass. Genetic and epigenetic instabilities in the regenerated plants (regenerants) were assessed by three molecular markers AFLP, S-SAP and MSAP. Two pools of calli derived from young inflorescences of a single donor plant and 44 randomly chosen regenerants were subjected to AFLP analysis. Results showed that 74 out of 793 scored bands were polymorphic among the studied samples, giving rise to a genetic variation frequency of 9.3%. The number of variant bands as compared to the donor plant varied greatly among the regenerants, with a small number of regenerants accumulated a large number of variant bands (maximum 55), while the majority of regenerants showed only 2–3 variant bands. A subset of regenerants together with the two pools of calli were selected for S-SAP and MSAP analysis to detect possible retrotranspositional activity of a prominent retroelement family, BARE-1, in the genomes of Hordem species, and possible alterations in cytosine methylation. S-SAP analysis showed that of the 768 scored bands, 151 were polymorphic among the analyzed samples, giving rise to a genetic variation frequency of 19.7%, albeit no evidence for retrotranspositional event was obtained based on locus-specific PCR amplifications. MSAP analysis revealed that tissue culture has caused cytosine methylation alterations in both level and pattern compared with the donor plant. Sequencing of selected variant bands indicated that both protein-coding genes and transposon/retrotransposons were underlying the genetic and epigenetic variations. Correlation analysis of the genetic and epigenetic instabilities indicated that there existed a significant correlation between MSAP and S-SAP (r = 0.8118, 1,000 permutations, P < 0.05), whereas the correlation between MSAP and AFLP (r = 0.1048) is not statistically significant. Electronic supplementary material The online version of this article (doi:) contains supplementary material, which is available to authorized users. Xiaoling Li and Xiaoming Yu contributed equally to this work.     

The effects of fire on communities,guilds and species of breeding birds in burnt and control pinewoods in central Italy

Breeding bird communities in burnt and unburnt residual pinewoods were studied over 3 years by line-transect method, following a catastrophic fire event in Castelfusano (Rome, Central Italy; July 2000). We applied bootstrap procedures to evaluate whether the observed data were true or just produced by chance, and then examined the emerging patterns at three levels: community, guild and species levels. At the community level, fire acted on breeding bird communities by altering especially the total abundance patterns: the species abundance decreased in the burnt pinewood compared to the residual one, but other parameters were not significantly affected by fire. As a consequence of fire, the destruction and structural simplification of the canopy and shrubby component, as well as the increase of edge habitat and patchiness at landscape scale, induced a turnover in species between pinewoods. Species turnover was higher at the burnt than at the residual pinewoods, during all the 3 years of study. At the guild level, the forest species decreased strongly in terms of richness and abundance in the burnt pinewoods, contrary to the edge and open habitat species which increased in terms of richness, abundance and evenness. Edge species showed the highest turnover in burnt pinewood during the whole period of study. At species level, after an a priori subdivision (based on bibliographic search) of the various species in two ecological guilds (forest versus edge species), it was found that an a posteriori statistical analysis confirmed the expected trend, i.e. that the species which decreased significantly in burnt pinewood were essentially the forest species, whereas the species which increased were essentially the edge/open habitat ones. Overall, in order to investigate the effects of fire catastrophes on birds, the guild approach seems more exhaustive than the taxonomic community approach, where intrinsic confounding trends are present.     

野生哺乳动物肠道微生物组研究进展与展望

动物肠道菌群与宿主在营养代谢、免疫、疾病等方面有密切的关系。鉴于肠道菌群的这种重要性,野生动物肠道菌群宏基因组学日益成为保护生物学的研究热点。本文主要综述了近年来野生哺乳动物肠道微生物组的若干最新研究进展,着眼于宿主食性适应、健康、宿主与微生物组的协同进化等若干重要问题,对食肉类、灵长类、有蹄类、有袋类、鲸类、啮齿类等几大比较受关注的动物类群分别进行了总结,以期为今后我国哺乳动物肠道微生物组的研究提供一些视角和方向,并为野生动物的保护提供新的理论基础及研究手段。     

Biological effects of salinity gradient reversals in a southeast African estuarine lake

St Lucia Lake on the north coast of Natal, South Africa, has an area of 325 km² and is the largest estuarine complex in Africa. It consists of a 20 km tidal channel, averagingca. 400 m in width, linking the sea with the non-tidal lake which is H-shaped with a maximum length ofca. 40 km and width ofca. 20 km. Except during flood periods the depth of the lake does not exceed 2 m. The salinity gradient depends on evaporation, the configuration of the mouth and on the input of fresh water from four rivers which discharge into the northern and western areas of the lake. If fresh water input is high, the lake and much of the channel may be fresh. An intermediate stage features a normal salinity gradient while a third stage shows a reversed salinity gradient with salinities in excess of 100‰ in the upper reaches of the system. Changing salinities have marked effects on the biota. Aquatic macrophytes show cycles of appearance and disappearance depending on salinity tolerance and the presence of dormant stages. The resident benthic faunal species go through cycles of range expansion and contraction depending on prevailing salinities and recolonisation by dispersal phases. To date salinities in the southern part of the lake have approached, but not exceeded, lethal levels and this has therefore acted as a reservoir area. Catchment degradation and water abstraction are anticipated to exacerbate future salinity extremes. This has resulted in concern for the long term viability of this Ramsar site which has major southern African populations of hippopotamus and crocodile, provides breeding sites for South African Red Data water bird species and plays an important nursery role for marine fish and penaeid prawns.     

Different CMS sources found in Beta vulgaris ssp maritima: mitochondrial variability in wild populations revealed by a rapid screening procedure

Summary Mitochondrial DNA (mtDNA) variation in natural Beta maritima populations has been characterized by way of Southern blot hybridizations of total DNA using non-radioactive probes and chemiluminescent detection. It was found that the previously described N (normal) mitochondrial type could be subdivided into three subtypes. A new mitochondrial genotype (type R) was distinguished in addition to the previously described type S. Both are male-sterile cytoplasms and can produce a. segregation of sexual phenotypes in their progenies depending on the nuclear background. The populations contained at least two to four different mitochondrial genotypes.     

Species interactions and habitat associations of birds inhabiting urban areas of Sydney,Australia

Abstract The absence of small birds from many suburban areas may be due to adverse garden characteristics, interspecific aggression or human behaviour such as supplementary food provisioning that encourages predators. We investigated the relationship between these factors and the presence of seven small bird species in Sydney through a community‐based survey. The survey was conducted by participants over a 7‐day period between 7 am and 10 am in November and early December 2000. Three dominant species, the noisy miner (Manorina melanocephala), pied currawong (Strepera graculina) and common myna (Acridotheres tristis) were each present in over 59% of gardens. Each small bird species was present in less than 40% of gardens. All small birds were negatively associated with noisy miners, but only the silvereye (Zosterops lateralis) was negatively associated with pied currawongs. None of the species of small birds was negatively associated with common mynas. Four species of small birds were associated with at least one habitat variable, notably the proportion of native vegetation. Although more birds were recorded in gardens in which meat was provided, there were significantly fewer small birds in these gardens. There were also more birds recorded in gardens where seed was provided, with red‐browed finches (Neochmia temporalis) positively associated with seed provisioning in most regions of Sydney. The presence of dogs and cats was not related to the total abundance of birds overall or small birds in gardens. While garden characteristics may influence the presence of small birds to some degree, the presence of noisy miners, a species that are thought to aggressively exclude other species from their territories, is likely to be an important influence on these species in suburban areas. Furthermore, supplementary feeding by people is likely to negatively influence some small birds. The presence of carnivorous pets does not seem to influence the presence of small birds at the scale of the individual garden.