Bacterial Endophytes from Vitis vinifera L. – Metabolomics Characterization of Plant-Endophyte Crosstalk

Bacterial endophytes are known to protect Vitis vinifera L. against various harmful effects of the environment and support its growth. However, for the most part, biochemical responses of such co-existence have not yet been fully elucidated. In this work, we aimed to characterize the activities of endophytic consortia in a plant-endophyte extract by measuring five indicators of colonization (overall endophyte metabolic activity, microbial ACC deaminase activity, ability to solubilize phosphorus, ability to convert atmospheric nitrogen to ammonia ions, and ability to produce growth promoting indole acetic acid), and find relationships between these activities and metabolome. The V. vinifera canes for the metabolomics fingerprinting were extracted successively with water and methanol, and analysed by ultra-high performance liquid chromatography coupled with high resolution mass spectrometry. For data processing, the MS-DIAL – MS-CleanR – MS-FINDER software platform was used, and the data matrix was processed by PCA and PLS-DA multivariate statistical methods. The metabolites that were upregulated with the heavy endophyte colonization were mainly chlorins, phenolics, flavonoid and terpenoid glycosides, tannins, dihydropyranones, sesquiterpene lactones, and long-chain unsaturated fatty acids.     

濒危植物百花山葡萄群落物种生态位特征与种间联结研究

以北京市Ⅱ级重点保护野生植物百花山葡萄(Vitis baihuashanensis M.S.Kang et D.Z.Lu)为研究对象,通过对其野生个体所在群落和人工扩繁个体所在群落进行样方调查,定量分析百花山葡萄自然群落的生态位特征和种间联结关系,对比人工群落的相关情况,探讨其濒危原因。结果显示:百花山葡萄自然群落总体呈正相关,物种正负关联比小于1,仍在向稳定群落发育;由于高大乔木和上层优势灌木截获了大量光照,以及高生态位重叠物种小花溲疏(Deutzia parviflora Bge.)、牛叠肚(Rubus crataegifolius Bge.)、短尾铁线莲(Clematis brevicaudata DC.)、五味子(Schisandra chinensis(Turcz.)Baill.)对各类资源的夺取,使百花山葡萄的营养生长受到明显限制。人工群落总体呈正相关,主要物种正负关联比大于1,目前处于相对较稳定状态;该群落缺乏高大乔木,光照充足,百花山葡萄与圆柏(Sabina chinensis(L.)Ant.)幼树等优势灌木呈不显著正相关,所受竞争压力相对较小,植株已进入生殖生长阶段。建议加强对百花山葡萄自然群落的人工抚育,适当疏枝、疏灌、疏藤,提高和改善百花山葡萄的光照条件,降低其他物种的资源竞争力度,以提高其在群落内的竞争能力,提升物种保护成效。     

Application of AFLPs to the characterization of grapevine Vitis vinifera L. genetic resources. A case study with accessions from Rioja (Spain)

 AFLPs were used to characterize 67 different grapevine accessions from a collection of D.O.Ca. Rioja in Spain. A correct selection of primers and selective nucleotides allowed us to maximize the number of amplified fragments analyzed per reaction yielding an average of 100 per reaction, 49% of which were polymorphic. Based on the presence or absence of amplified fragments for each genotype resulting from a reaction with two primer combinations, we have established the genetic similarity between the different accessions in the collection. These results allowed us to resolve different genotypes maintained under the same name (homonyms) and to identify the same genotype under different names (synonyms) thus permitting the elimination of redundant germplasm. Furthermore, by providing information on more than 50 polymorphic loci per reaction, a few reactions were sufficient to identify distinct AFLP patterns characteristic of specific clones, with different agronomic and organoleptic features, belonging to the same cultivar. The possibility for clonal identification, shown here for grapevines, can have important implications in the protection and management of clonal selections. Received: 1 February 1998/Accepted: 25 February 1998     

Development and histochemistry of the cells,cell walls,and cuticle of the dermal system of fruit of the grape,Vitis vinifera L.

Summary The dermal system comprises the outer epidermis of the pericarp, its covering of wax and cuticle and the collenchymatous hypodermal cells. During the first of the two post-anthesis phases of fruit growth, differentiation occurred with respect to cell and nuclear volume, content of polyphenolic substances, and wall thickening. Walls of the presumptive dermal system cells developed massive primary thickenings which stained intensely with fluorescent brightener dyes. In the second phase of fruit growth these cells were redifferentiated, their walls becoming thinner as they enlarged to accommodate fruit expansion. Binding of the fluorescent brightener dye was reduced and confined to the outer edges of the walls. At maturity, the walls of the cortical cells adjacent to the dermal system underwent autolysis.The cuticle was evident during the first 16 days after anthesis as a thin layer which reacted positively with neutral lipid dyes and which contained periodate sensitive vinyl groups. Differentiation of a secondary cuticle followed, and a number of distinct layers were detected by autofluorescence, and staining with auramine 0, Nile blue, and PAS. Cuticle thickness and complexity was maintained throughout the second growth phase.     

Regulation of polyphenol production in Vitis vinifera cell suspension cultures by sugars

Sucrose was found to modulate polyphenol accumulation in Vitis vinifera cell cultures. The production of anthocyanins increased 12-fold after addition of 0.15 m sucrose, while that of stilbenes was only slightly affected. Sucrose did not play a physical role because metabolic sugars were required for the induction of polyphenol accumulation. Indeed, the polyols, mannitol and sorbitol, had no effect on this accumulation. We established a model system to investigate the mechanism of sucrose regulation of polyphenol production without inhibition of grape cell growth. After addition of sucrose to the culture medium, the major sugars accumulated in grape cells were glucose and fructose, reaching 40% of the dry weight. The increase in the level of these hexoses closely coincided with the increase in anthocyanin accumulation in grape cells. Received: 18 August 1997 / Revision received: 6 November 1997 / Accepted: 5 January 1998     

Cortical microtubule organization in Vitis protoplasts as affected by concentration of enzyme isolation medium and duration of incubation

Protoplasts of Vitis rotundifolia Michx. cv. Summit were isolated from mesophyll of axenic shoot cultures under different enzyme concentrations and digestion times. Viability and plating efficiency were assessed and related to the cortical microtubule network, visualized using immunofluorescence. Higher concentrations of enzyme isolation medium significantly decreased protoplast viability and plating efficiency. However, the cortical microtubule network appeared stable, at all concentrations with dense, continuous microtubule strands in both random and parallel arrays. In contrast, longer vs shorter enzyme incubation duration resulted in significantly lower plating efficiency, which was correlated with changes in cortical microtubule organization. With longer incubation, the frequency of parallel microtubule strands decreased; microtubule organization showed increasing disruption, microtubule strands were shortened, fragmented and exhibited only a weak fluorescence labeling. Both high enzyme concentration and prolonged incubation periods negatively affected protoplast regenerability, but in different ways. Microtubule organization was sensitive to duration of incubation, but not to enzyme concentration. It is concluded that the presence of a well-developed cortical microtubule network does not gurantee regeneration. Other factors related to isolation appear to be involved.     

The dormancy-breaking stimuli “chilling,hypoxia and cyanamide exposure” up-regulate the expression of α-amylase genes in grapevine buds

It has been suggested that respiratory stress is involved in the mechanism underlying the dormancy-breaking effect of hydrogen cyanamide (H₂CN₂) and sodium azide in grapevine buds; indeed, reductions in oxygen levels (hypoxia) and inhibitors of respiration promote bud-break in grapevines. In this study, we showed that, hypoxia increased starch hydrolysis soluble sugar consumption and up-regulated the expression of α-amylase genes (Vvα-AMYs) in grapevine buds, suggesting that these biochemical changes induced by hypoxia, may play a relevant role in the release of buds from endodormancy (ED). Three of the four Vvα-AMY genes that are expressed in grapevine buds were up-regulated by hypoxia and a correlation between changes in sugar content and level of Vvα-AMY gene expression during the hypoxia treatment was found, suggesting that soluble sugars mediate the effect of hypoxia on Vvα-AMY gene expression. Exogenous applications of soluble sugars and sugar analogs confirmed this finding and revealed that osmotic stress induces the expression of Vvα-AMY1 and Vvα-AMY3 and that soluble sugars induces Vvα-AMY2 and Vvα-AMY4 gene expression. Interestingly, the plant hormone gibberellic acid (GA₃) induced the expression of Vvα-AMY3 and Vvα-AMY4 genes, while dormancy breaking stimuli, chilling and cyanamide exposure, mainly induced the expression of Vvα-AMY1 and Vvα-AMY2 genes, suggesting that these two α-amylase genes might be involved in the release of grapevine buds from the ED.