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991.
Tanaka T Yokoyama M Matsumoto S Fukatsu R You Z Masai H 《The Journal of biological chemistry》2010,285(51):39609-39622
Replication fork protection complex Swi1-Swi3 and replication checkpoint mediator Mrc1 are required for maintenance of replication fork integrity during the course of DNA replication in the fission yeast Schizosaccharomyces pombe. These proteins play crucial roles in stabilizing stalled forks and activating replication checkpoint signaling pathways. Although they are conserved replication fork components, precise biochemical roles of these proteins are not known. Here we purified Mrc1 and Swi1-Swi3 proteins and show that these proteins bind to DNA independently but synergistically in vitro. Mrc1 binds preferentially to arrested fork or D-loop-like structures, although the affinity is relatively low, whereas the Swi1-Swi3 complex binds to double-stranded DNA with higher affinity. In the presence of a low concentration of Swi1-Swi3, Mrc1 generates a novel ternary complex and binds to various types of DNA with higher affinity. Moreover, purified Mrc1 and Swi1-Swi3 physically interact with each other, and this interaction is lost by mutations in the known DNA binding domain of Mrc1 (K235E,K236E). The interaction is also lost in a mutant form of Swi1 (E662K) that is specifically defective in polar fork arrest at a site called RTS1 and causes sensitivity to genotoxic agents, although the DNA binding affinity of Swi1-Swi3 is not affected by this mutation. As expected, the synergistic effect of the Swi1-Swi3 on DNA binding of Mrc1 is also lost by these mutations affecting the interaction between Mrc1 and Swi1-Swi3. Our results reveal an aspect of molecular interactions that may play an important role in replication pausing and fork stabilization. 相似文献
992.
Beiyu Liu Gokben Yildirir Jianyang Wang G?khan Tolun Jack D. Griffith Paul T. Englund 《The Journal of biological chemistry》2010,285(10):7056-7066
Kinetoplast DNA, the trypanosome mitochondrial genome, is a network of interlocked DNA rings including several thousand minicircles and a few dozen maxicircles. Minicircles replicate after release from the network, and their progeny reattach. Remarkably, trypanosomes have six mitochondrial DNA helicases related to yeast PIF1 helicase. Here we report that one of the six, TbPIF1, functions in minicircle replication. RNA interference (RNAi) of TbPIF1 causes a growth defect and kinetoplast DNA loss. Minicircle replication intermediates decrease during RNAi, and there is an accumulation of multiply interlocked, covalently closed minicircle dimers (fraction U). In studying the significance of fraction U, we found that this species also accumulates during RNAi of mitochondrial topoisomerase II. These data indicate that one function of TbPIF1 is an involvement, together with topoisomerase II, in the segregation of minicircle progeny. 相似文献
993.
Bacterial chromosomes are immense polymers whose faithful replication and segregation are crucial to cell survival. The ability
of proteins such as FtsK to move unidirectionally toward the replication terminus, and direct DNA translocation into the appropriate
daughter cell during cell division, requires that bacterial genomes maintain an architecture for the orderly replication and
segregation of chromosomes. We suggest that proteins that locate the replication terminus exploit strand-biased sequences
that are overrepresented on one DNA strand, and that selection increases with decreased distance to the replication terminus.
We report a generalized method for detecting these architecture imparting sequences (AIMS) and have identified AIMS in nearly
all bacterial genomes. Their increased abundance on leading strands and decreased abundance on lagging strands toward replication
termini are not the result of changes in mutational bias; rather, they reflect a gradient of long-term positive selection
for AIMS. The maintenance of the pattern of AIMS across the genomes of related bacteria independent of their positions within
individual genes suggests a well-conserved role in genome biology. The stable gradient of AIMS abundance from replication
origin to terminus suggests that the replicore acts as a target of selection, where selection for chromosome architecture
results in the maintenance of gene order and in the lack of high-frequency DNA inversion within replicores.
[Reviewing Editor: Dr. Martin Kreitman] 相似文献
994.
Tokunaga Y Yamazaki Y Morita T 《Biochemical and biophysical research communications》2006,348(3):957-962
VEGF-A165 plays a central role in neovascularization. The biological activities of VEGF-A165 are largely mediated through KDR. VEGF-A165 also binds to cellular coreceptors, neuropilin-1 (NP-1), and heparin, via its C-terminal domain, resulting in functional modulation. Parapoxvirus-encoded VEGFs (PV-VEGFs), which recognize KDR, possess basic amino acid clusters in their C-terminal regions. Some PV-VEGFs may interact with NP-1; however, the NP-1- and heparin-binding properties have not been fully characterized. Here, we demonstrate that the heparin- and NP-1-binding region of PV-VEGFs is located in its C-terminal tail. Furthermore, the two arginine residues adjacent to the C-terminus greatly contribute to both interactions. 相似文献
995.
Higher plant plastid DNA (ptDNA) is generally described as a double-stranded circular molecule of the size of the monomer of the plastid genome. Also, the substrates and products of ptDNA replication are generally assumed to be circular molecules. Linear or partly linear ptDNA molecules were detected in our present study using pulsed-field gel electrophoresis and Southern blotting of ptDNA restricted with ‘single cutter’ restriction enzymes. These linear DNA molecules show discrete end points which were mapped using appropriate probes. One possible explanation of discrete ends would be that they represent origins of replication. Indeed, some of the mapped ends correlate well with the known origins of replication of tobacco plastids, i.e. both of the oriA sequences and—less pronouncedly—with the oriB elements. Other ends correspond to replication origins that were described for Oenothera hookeri, Zea mays, Glycine max and Chlamydomonas reinhardtii, respectively, while some of the mapped ends were not described previously and␣might therefore represent additional origins of replication. 相似文献
996.
997.
998.
目的 探索减毒甲型肝炎病毒( HAV) ( H2减毒株)在Hep G2 .2 .15细胞中对乙型肝炎病毒( HBV)表达HBs Ag和HBe Ag的影响。方法 在Hep G2 .2 .15细胞中,加入含3×10 - 2 ( 3×10 4 .5CCID50 / ml) ,3×10 - 3( 3×10 3.5CCID50 / ml)浓度的减毒HAV。按不同疫苗浓度,每4 d换液1次,留取第12和第16天的培养上清液;同时设立对照组。用微粒子酶免分析法检测培养上清液中的HBs Ag和HBe Ag含量。计算减毒HAV在不同浓度,以及不同作用时间长度的条件下,对Hep G2 .2 .15细胞表达HBs Ag和HBe Ag的影响。结果 3×10 - 2 Ampoule/ ml的减毒HAV作用Hep G2 .2 .5细胞12 d后,培养上清液的HBe Ag浓度为( 4 7.2 3±6 .18) S/ CO,低于对照组的( 10 1.15±15 .77) S/ CO,2组比较差异有非常显著性( P<0 .0 1) ;16 d后,上清液HBe Ag含量为( 4 0 .2 7±13.30 ) S/ CO,也显著低于对照组的( 6 5 .85±3.4 6 ) S/ CO( P<0 .0 5 ) ;HBs Ag含量为( 2 .6 8±0 .31) S/ N,低于对照组的( 5 .10±1.2 7)S/ N,差异有显著性( P<0 .0 5 )。而3×10 - 3Ampoule/ ml的减毒HAV作用Hep G2 .2 .15细胞12 d后,培养上清液的HBs Ag浓度与对照组比较有显著性下降( P<0 .0 5 )。结论 一定浓度的减毒HAV可能有直接抑制HBV表达HBs Ag,HBe Ag的作用 相似文献
999.
Movement proteins (MPs) are non-cell autonomous viral-encoded proteins that assist viruses in their cell-to-cell movement. The MP encoded by Tobamoviruses is the best characterized example among MPs of non-tubule-inducing plant RNA viruses. The MP of Oilseed Rape Mosaic Tobamovirus (ORMV) was transgenically expressed in Arabidopsis thaliana, ecotype RLD, under the expression of the 35S promoter from Cauliflower Mosaic Virus. Transgenic lines were obtained in sense and antisense orientations. One of the sense transgenic lines was further characterized turning out to carry one copy of the transgene inserted in the terminal region of the right arm of chromosome 1. The constitutive expression of ORMV-MP induced mild physiological effects in Arabidopsis. Plants of the transgenic line allowed a faster systemic movement of the phloem tracer carboxyfluorescein. The tracer was unloaded differentially in different flower parts, revealing differential effects of ORMV-MP on phloem unloading in sink organs. On the other hand, transgenic Arabidopsis did not show any effect on biomass partitioning or sugar availability, effects reported for equivalent transgenic solanaceous plants expressing the MP of Tobacco Mosaic Virus, another Tobamovirus. Finally, the transgenic Arabidopsis plants were susceptible to ORMV infection, although showing milder overall symptoms than non-transgenic controls. The results highlight the relevance of the specific host-virus system, in the physiological outcome of the molecular interactions established by MPs.C. Mansilla and I. Aguilar contributed equally. 相似文献
1000.