From canopy to seed: Loss of snow drives directional changes in forest composition

Climate change is altering the conditions for tree recruitment, growth, and survival, and impacting forest community composition. Across southeast Alaska, USA, and British Columbia, Canada, Callitropsis nootkatensis (Alaska yellow‐cedar) is experiencing extensive climate change‐induced canopy mortality due to fine‐root death during soil freezing events following warmer winters and the loss of insulating snowpack. Here, we examine the effects of ongoing, climate‐driven canopy mortality on forest community composition and identify potential shifts in stand trajectories due to the loss of a single canopy species. We sampled canopy and regenerating forest communities across the extent of C. nootkatensis decline in southeast Alaska to quantify the effects of climate, community, and stand‐level drivers on C. nootkatensis canopy mortality and regeneration as well as postdecline regenerating community composition. Across the plot network, C. nootkatensis exhibited significantly higher mortality than co‐occurring conifers across all size classes and locations. Regenerating community composition was highly variable but closely related to the severity of C. nootkatensis mortality. Callitropsis nootkatensis canopy mortality was correlated with winter temperatures and precipitation as well as local soil drainage, with regenerating community composition and C. nootkatensis regeneration abundances best explained by available seed source. In areas of high C. nootkatensis mortality, C. nootkatensis regeneration was low and replaced by Tsuga. Our study suggests that climate‐induced forest mortality is driving alternate successional pathways in forests where C. nootkatensis was once a major component. These pathways are likely to lead to long‐term shifts in forest community composition and stand dynamics. Our analysis fills a critical knowledge gap on forest ecosystem response and rearrangement following the climate‐driven decline of a single species, providing new insight into stand dynamics in a changing climate. As tree species across the globe are increasingly stressed by climate change‐induced alteration of suitable habitat, identifying the autecological factors contributing to successful regeneration, or lack thereof, will provide key insight into forest resilience and persistence on the landscape.     

Fungal communities associated with acorn woodpeckers and their excavations

Wood-decay fungi soften wood, putatively providing opportunities for woodpeckers to excavate an otherwise hard substrate, yet the fungal community composition in tree cavities and the specificity of these relationships is largely unknown. We used high-throughput amplicon sequencing of the fungal ITS2 region to examine the fungal communities associated with acorn woodpeckers (Melanerpes formicivorus) and their cavities in mature valley oak (Quercus lobata) and blue oak (Q. douglasii) trees in an oak savannah of central coastal California, USA. Acorn woodpeckers and their excavations harbored over 1500 fungal taxa, including more than 100 putative wood-decay fungi. The fungal communities found on the birds were more similar to those found in excavated cavities than those found in trees without excavated holes. These results suggest that symbiotic associations between acorn woodpeckers and fungi are highly diverse, with low specificity. Symbiotic associations between cavity-excavators and fungi are likely more common and widespread than previously thought.     

Wood decay under the microscope

Many aspects of the interactions between host wood structure and fungal activity can be revealed by high resolution light microscopy, and this technique has provided much of the information discussed here. A wide range of different types of decay can result from permutations of host species, fungal species and conditions within wood. Within this spectrum, three main types are commonly recognised: brown rot, white rot and soft rot. The present review explores parts of the range of variation that each of these encompasses and emphasizes that degradation modes appear to reflect a co-evolutionary adaptation of decay fungi to different wood species or the lignin composition within more primitive and advanced wood cell types. One objective of this review is to provide evidence that the terms brown rot, white rot and soft rot may not be obsolete, but rigid definitions for fungi that are placed into these categories may be less appropriate than thought previously. Detailed knowledge of decomposition processes does not only aid prognosis of decay development in living trees for hazard assessment but also allows the identification of wood decay fungi that can be used for biotechnology processes in the wood industry. In contrast to bacteria or commercial enzymes, hyphae can completely ramify through solid wood. In this review evidence is provided that wood decay fungi can effectively induce permeability changes in gymnospermous heartwood or can be applied to facilitate the identification of tree rings in diffuse porous wood of angiosperms. The specificity of their enzymes and the mild conditions under which degradation proceeds is partly detrimental for trees, but also make wood decay fungi potentially efficient biotechnological tools.     

Patch and landscape features drive fire regime in a Brazilian flammable ecosystem

The flammable ecosystems are evolutionary dependent on the periodic action of fire. Several environmental factors, both at local and landscape scales, can affect fire regimes in these ecosystems differently. Here, we evaluated the influence of local and landscape features on two parameters of the fire regime of a flammable protected area of the Brazilian savanna: The Chapada Diamantina National Park. We characterized both fire frequency and the time since the last fire, from 1990 to 2019 and measured five environmental predictors (tree canopy cover, altitude, water surface, predominant land use and distance to the nearest municipality). We used Generalized Additive Models for Location, Scale and Shape (GAMLSS) to assess the influence of environmental predictors on the measured fire regime parameters. We found a large interannual variation in the total annual area burned in the studied period. In total, 68 % of the protected area (1030 km²) was burned at least once and 32 % (486 km²) was unaffected by fires during the study period. Predominant land use, distance to the nearest municipality, tree cover and the interaction between tree cover and altitude were negatively related to fire frequency, while the water surface and altitude positively influenced fire frequency in the park. Compared to older fires, recent fires occurred in landscapes at lower altitudes and with lower tree cover. Our results demonstrate that the fire frequency and time since the last fire were highly variable across the park, reflecting the strong influence of landscape heterogeneity on their parameters.     

High-fidelity representation of climate variations by Amburana cearensis tree-ring chronologies across a tropical forest transition in South America

Numerous ring-width chronologies from different species have recently been developed in diverse tropical forests across South America. However, the temporal and spatial climate signals in these tropical chronologies is less well known. In this work, annual growth rings of Amburana cearensis, a widely distributed tropical tree species, were employed to estimate temporal and spatial patterns of climate variability in the transition from the dry Chiquitano (16–17°S) to the humid Guarayos-southern Amazon (14–15°S) forests. Four well-replicated chronologies (16–21 trees, 22–28 radii) of A. cearensis were compared with temperature and precipitation records available in the region. The interannual variations in all four A. cearensis tree-ring chronologies are positively correlated with precipitation and negatively with temperature during the late dry-early wet season, the classic moisture response seen widely in trees from dry tropical and temperate forests worldwide. However, the chronologies from the dry Chiquitano forests of southern Bolivia reflect the regional reduction in precipitation during recent decades, while the chronologies from the tropical lowland moist forests in the north capture the recent increase in precipitation in the southern Amazon basin. These results indicate that A. cearensis tree growth is not only sensitive to the moisture balance of the growing season, it can also record subtle differences in regional precipitation trends across the dry to humid forest transition. Comparisons with previously developed Centrolobium microchaete chronologies in the region reveal a substantial common signal between chronologies in similar environments, suggesting that regional differences in climate are a major drivers of tree growth along the precipitation gradient. The difficulty of finding A. cearensis trees over 150-years old is the main limitation involved in the paleoclimate application of this species. The expansion of monocultures and intensive cattle ranching in the South American tropics are contributing to the loss of these old growth A. cearensis trees and the valuable records of climate variability and climate change that they contain.     

Patterns of daily stem growth in different tree species in a warm-temperate forest in northern China

Radial growth in trees responds to environmental changes in various ways ranging from immediate to hysteretic responses. However, species-specific tree radial growth patterns and their responses to short-term weather changes are not fully understood. Here, the daily stem radial changes (SRCs) in four common tree species, linden (Tilia mongolica), birch (Betula dahurica), oak (Quercus wutaishanica) and larch (Larix principis-rupprechtii), were monitored with high-resolution point dendrometers during the main growing seasons in 2017–2019 on Dongling Mountain, northern China. The SRC was differentiated into tree water deficit-induced stem shrinkage (TWD) and growth-induced irreversible stem expansion (GRO) to evaluate species-specific responses to weather variables and short-term drought events. We found that the TWD and GRO of the four species were significantly different. The TWD was influenced primarily by the vapor pressure deficit (VPD), whereas the GRO was influenced primarily by precipitation (P). In linden and birch, a larger proportion of the GRO occurred at higher air temperature (T_mean) and VPD values; in contrast, the range of these changes was lower in oak and larch. With the increased durations of drought periods, oak and larch experienced large and rapid increases in TWD, whereas birch and linden showed small and slow increases. These results indicate that oak and larch would be sensitive to warmer and drier weather conditions predicted for the future, while linden and birch would have a conservative growth strategy. Our results provide further insights into the physiology of these four tree species and allow us to better predict the growth response of forest dynamics under climate change.     

Wood density as a proxy of drought-induced forest dieback in silver fir

Drought-induced dieback is a matter of global concern. It has been widely reported and could compromise the climate warming mitigation potential of forests. That is why we need reliable early-warning proxies to achieve better forecasts of forest dieback and tree death. Tree-ring data can provide some of these needed proxies. Here I propose considering minimum (MND) and maximum (MXD) wood density values as proxies of tree vulnerability against drought. This hypothesis is evaluated in silver fir (Abies alba) forests from the western Spanish Pyrenees showing ongoing dieback processes after the severe 1985 drought. MXD increased in response to warm summer conditions in 1985 whereas MND increased in response to growing-season water deficit in 1986. The average between prior MXD (MXD_t-1) and subsequent MND (MND_t) could be used to detect severe drought impacts and forecast dieback.     

The status and conservation of the Cape Gannet Morus capensis

The Cape Gannet Morus capensis is one of several seabird species endemic to the Benguela upwelling ecosystem (BUS) but whose population has recently decreased, leading to an unfavourable IUCN Red List assessment. Application of ‘JARA’ (‘Just Another Red-List Assessment,’ a Bayesian state-space tool used for IUCN Red List assessments) to updated information on the areas occupied by Cape Gannets and the nest densities of breeding birds at their six colonies, suggested that the species should be classified as Vulnerable. However, the rate of decrease of Cape Gannets in their most-recent generation exceeded that of the previous generation, primarily as a result of large decreases at Bird Island, Lambert’s Bay, and Malgas Island, off South Africa’s west coast (the western part of their range). Since the 1960s, there has been an ongoing redistribution of the species from northwest to southeast around southern Africa, and ～70% of the population now occurs on the south coast of South Africa, at Bird Island in Algoa Bay, on the eastern border of the BUS. Recruitment rather than adult survival may be limiting the present population; however, information on the seabird’s demographic parameters and mortality in fisheries is lacking for colonies in the northern part of the BUS. Presently, major threats to Cape Gannet include: substantially decreased availability of their preferred prey in the west; heavy mortalities of eggs, chicks and fledglings at and around colonies, inflicted by Cape Fur Seals Arctocephalus pusillus and other seabirds; substantial disturbance at colonies caused by Cape Fur Seals attacking adult gannets ashore; oiling; and disease.     

麻雀幼鸟和成鸟逃逸距离的比较

逃逸是鸟类常用的反捕食手段。自然选择会优化鸟类的逃逸距离,以便在躲避被捕食风险和保持能量之间做出权衡。理论模型预测动物个体可依据期望寿命来调整自身的行为：期望寿命短的个体倾向于风险偏好,即逃逸距离短;而期望寿命长的个体倾向于风险回避,即逃逸距离长。同时,逃逸距离还受到外部因素（如人为干扰强度、鸟类群体大小）的影响。本研究在北京城区收集了麻雀（Passer montanus）145只成鸟和75只幼鸟的逃逸距离数据,发现麻雀成鸟比幼鸟有着更长的逃逸距离,且成鸟更可能是群体中首先逃逸的个体。此外,研究发现麻雀的逃逸距离随着人为干扰强度的增加而降低,随着群体大小增加而增加。本研究结果符合理论预期：存活率高的类群（成鸟）有着更长的逃逸距离。     

树鼩原代皮肤成纤维细胞的分离培养技术

建立稳定的树鼩(Tupaiabelangeri)皮肤成纤维细胞的体外培养体系,可为有关此类细胞的实验和疾病树鼩细胞模型提供技术支持。取树鼩大腿内侧皮肤用组织块贴壁法和胶原酶Ⅰ消化法分离皮肤细胞,胰蛋白酶差别消化法纯化细胞;用MEM(10%FBS)完全培养基和含低血清生长添加物(LSGS)的培养基培养细胞;免疫荧光和蛋白印迹法鉴定细胞,并测定细胞的生长、冻存和复苏特性。经树鼩皮肤细胞分离效果比较,胶原酶消化法比组织块贴壁法更适合用于树鼩原代皮肤细胞分离;对分离及冻存复苏后细胞生长状况观察比较发现,添加了LSGS的MEM培养基更利于细胞存活、生长;细胞形态观察、免疫荧光和蛋白印迹检测鉴定所分离的细胞为树鼩皮肤成纤维细胞。成功建立了树鼩原代皮肤细胞的分离、纯化方法,并优化了该细胞的培养条件。