Multiplexing RMCE: Versatile Extensions of the Flp-Recombinase-Mediated Cassette-Exchange Technology

There are strong indications, but as yet no proof, that extended  48-bp Flp recombinase targets (FRTs) represent unique targets in all eukaryotic genomes investigated, and that recombinase-mediated cassette exchange is not hampered by the occurrence of genomic pseudo sites. This encouraged the present study in which we explore the feasibility of exchanging, in a given cell, two distinct genomically anchored cassettes, each flanked by a unique set of two heterospecific FRT sites. Mutant FRTs have to meet two major prerequisites for successful recombinase-mediated cassette exchange: (i) a self-recognition capacity comparable to a pair of FRT wild-type sites (FRT × FRT  ), and (ii) a negligible cross-interaction if part of a set of heterospecific sites (F′ × F). We apply a two-step strategy to explore various newly created FRT spacer mutants for these properties. As a result of our screening steps, we identify combinations of sites that are successfully applied to parallel Flp-mediated genomic targeting (“multiplexing”) reactions (i.e., the simultaneous exchange of two separate target cassettes in a given cell).     

Red anemone guild flowers as focal places for mating and feeding by Levant glaphyrid beetles

Several species of glaphyrid (Scarabaeoidea: Glaphyridae) beetles forage and mate on Mediterranean red bowl‐shaped flowers. In red anemones and poppies in Israel, female beetles occupy only a subset of the flowers, do not aggregate, and are hidden below the petals. This raises the question of how males find their mates. In the present study, we investigated the hypothesis that males and females orient to similar plant‐generated cues, thereby increasing their mate encounter prospects. Previous studies have demonstrated that beetle attraction to red models increases with display area. Choice tests with flowers and with models indicate that both male and female beetles prefer large displays. In anemones, beetles rest, feed, and mate mainly on male‐phase flowers, which are larger than female‐phase flowers. Poppies that contain beetles are larger than the population average. These findings support the hypothesis that males and females meet by orienting to large red displays. Corolla size correlates with pollen reward in both plant species, suggesting that visits to large flowers also yield foraging benefits. Male beetles often jump rapidly among adjacent flowers. By contrast to the preference for large flowers by stationary individuals, these jump sequences are random with respect to flower sex‐phase (in anemone) and size (in poppy). They may enable males to detect females at close range. We hypothesize that males employ a mixed mate‐searching strategy, combining orientation to floral signals and to female‐produced cues. The glaphyrids' preference for large flowers may have selected for extraordinarily large displays within the ‘red anemone’ pollination guild of the Levant. © 2010 The Linnean Society of London, Biological Journal of the Linnean Society, 2010, 99 , 808–817.     

Investigating temporal changes in hybridization and introgression in a predominantly bimodal hybridizing population of invasive sika (Cervus nippon) and native red deer (C. elaphus) on the Kintyre Peninsula,Scotland

We investigated temporal changes in hybridization and introgression between native red deer (Cervus elaphus) and invasive Japanese sika (Cervus nippon) on the Kintyre Peninsula, Scotland, over 15 years, through analysis of 1513 samples of deer at 20 microsatellite loci and a mtDNA marker. We found no evidence that either the proportion of recent hybrids, or the levels of introgression had changed over the study period. Nevertheless, in one population where the two species have been in contact since ～1970, 44% of individuals sampled during the study were hybrids. This suggests that hybridization between these species can proceed fairly rapidly. By analysing the number of alleles that have introgressed from polymorphic red deer into the genetically homogenous sika population, we reconstructed the haplotypes of red deer alleles introduced by backcrossing. Five separate hybridization events could account for all the recently hybridized sika‐like individuals found across a large section of the Peninsula. Although we demonstrate that low rates of F1 hybridization can lead to substantial introgression, the progress of hybridization and introgression appears to be unpredictable over the short timescales.     

Genetic diversity and differentiation among Lagopus lagopus populations in Scandinavia and Scotland: evolutionary significant units confirmed by SNP markers

Single Nucleotide Polymorphism in four Scandinavian populations of willow grouse (Lagopus lagopus) and two Scottish populations of red grouse (Lagopus lagopus scoticus) were assessed at 13 protein‐coding loci. We found high levels of diversity, with one substitution every 55 bp as an average and a total of 76 unlinked parsimony informative SNPs. Different estimators of genetic diversity such as: number of synonymous and non‐synonymous sites, average number of alleles, number and percentage of polymorphic loci, mean nucleotide diversity (π_s, π_a) and gene diversity at synonymous and non‐synonymous sites showed higher diversity in the northern populations compared to southern ones. Strong levels of purifying selection found in all the populations together with neutrality tests conforming to neutral expectations agree with large effective population sizes. Assignment tests reported a clear distinction between Scandinavian and Scottish grouse suggesting the existence of two different evolutionary significant units. The divergence time between willow and red grouse ranging between 12 500 and 125 000 years, in conjunction with the presence of ‘specific’ markers for each subspecies prompt a reassessment of the taxonomical status of the Scottish red grouse.     

Under a neighbour's influence: public information affects stress hormones and behaviour of a songbird

Socially acquired information improves the accuracy and efficiency of environmental assessments and can increase fitness. Public information may be especially useful during unpredictable food conditions, or for species that depend on resources made less predictable by human disturbance. However, the physiological mechanisms by which direct foraging assessments and public information are integrated to affect behaviour remain largely unknown. We tested for potential effects of public information on the behavioural and hormonal response to food reduction by manipulating the social environment of captive red crossbills (Loxia curvirostra). Red crossbills are irruptive migrants that are considered sensitive to changes in food availability and use public information in decision making. Here, we show that public information can attenuate or intensify the release of glucocorticoids (i.e. stress hormones) during food shortage in red crossbills. The observed modulation of corticosterone may therefore be a physiological mechanism linking public information, direct environmental assessments and behavioural change. This mechanism would not only allow for public information to affect individual behaviour, but might also facilitate group decision making by bringing group members into more similar physiological states. The results further suggest that stressors affecting entire populations may be magnified in individual physiology through social interactions.     

苯肼致小鼠溶血性贫血模型的建立

目的:应用苯肼致小鼠发生溶血性贫血,建立急性溶血性贫血模型,筛选苯肼致小鼠贫血最佳浓度和红细胞移植的最佳时机。方法:30只C57BL/6小鼠随机分为6组,经腹腔注射不同浓度的苯肼溶液,于注射前和注射后第1、3、5、7、9天采集小鼠外周血进行检测,记录相关指标的变化,比较各组之间的差异,筛选出最佳溶血效果的给药浓度和红细胞移植治疗介入的时机。结果:注射苯肼溶液可使C57BL/6小鼠短期内产生明显的急性溶血性贫血症状,皮肤黏膜颜色苍白;外周血红细胞数量、血红蛋白含量、红细胞压积降低;随着苯肼溶液浓度的增加,小鼠体重显著减轻,存活率下降。结果表明,苯肼注射小鼠致贫血的最佳作用浓度为1.2mg/10g体重,小鼠贫血状态可维持7d。结论:建立了小鼠溶血性贫血模型,此模型可应用于红细胞输注效果的评价。     

野生火棘果红色素提取工艺优化

目的:通过正交实验,确定火棘果红色素的最佳提取工艺。方法:以贵州野生火棘果为原料,首先,以柠檬酸的乙醇溶液为提取剂,在400～800nm范围内对提取液的吸收光谱进行扫描,确定其最大吸收波长;然后,以最大吸收波长处的吸光度为衡量指标,确定最佳提取剂;再次,探讨了提取次数、提取温度、提取时间、料液比等单因素对火棘果红色素提取效果的影响;最后,在单因素实验结果的基础上,通过L9(34)正交实验,确定红色素的最佳提取工艺。结果:1.在400～800nm范围内,火棘果红色素的最大吸收波长为530nm;2.最佳提取剂为9%柠檬酸乙醇溶液;3.火棘果红色素的最佳提取工艺为,料液比1∶10,提取时间60min,提取次数2次,提取温度40℃。     

The impact of red howler monkey latrines on the distribution of main nutrients and on topsoil profiles in a tropical rain forest

Scarcity of organic matter and nutrients in the topsoil is a typical feature of lowland primary tropical rain forests. However, clumped defecation by vertebrate herbivore troops and further dung beetle processing may contribute to locally improve soil biological activity and plant growth. We studied the impact of clumped defecation by the red howler monkey (Alouatta seniculus), a frugivorous primate, on the vertical distribution of topsoil (0–6 cm) main nutrients and microstructures in a tropical rain forest (French Guiana). Three latrines, where monkey troops regularly defecate, were sampled, together with adjoining controls for carbon, nitrogen, phosphorus and microscopic components. The vertical distribution of C and N was affected by clumped defecation: nutrients were mostly restricted to the top 2 cm in control areas while latrines exhibited homogeneously distributed C and N, resulting in higher C and N content below 2 cm. No marked effect of defecation was registered on Olsen P. A small although significant increase in pH (0.1–0.3 pH units) and a marked increase in soil respiration (×1.5–2.5) were registered in latrines. Soil microstructures were studied by the small‐volume method. Variation according to depth, site and clumped defecation was analysed by Redundancy Analysis. The three latrines were characterized by an increase in root‐penetrated mineral‐organic assemblages, mainly composed of recent and old earthworm faeces. The local stimulation of plant roots, microbial and earthworm activity was prominent, together with an increase in soil fertility. Consequences for the regeneration of tropical rain forests in the Amazonian basin were discussed, in the light of existing knowledge.     

Feeding by the Newly Described Mixotrophic Dinoflagellate Paragymnodinium shiwhaense: Feeding Mechanism,Prey Species,and Effect of Prey Concentration

ABSTRACT. To investigate the feeding by the newly described mixotrophic dinoflagellate Paragymnodinium shiwhaense (GenBank accession number=AM408889), we explored the feeding process and the kinds of prey species that P. shiwhaense is able to feed on using several different types of microscopes, including a transmission electron microscope and high‐resolution video‐microscopy. In addition, we measured the growth and ingestion rates of P. shiwhaense on its optimal algal prey Amphidinium carterae as a function of prey concentration. We also measured these parameters for edible prey at a single concentration at which the growth and ingestion rates of P. shiwhaense on A. carterae were saturated. Paragymnodinium shiwhaense feed on algal prey using a peduncle after anchoring the prey by a tow filament. Among the algal prey offered, P. shiwhaense ingested small algal species that had equivalent spherical diameters (ESDs) ≤11 μm (e.g. the prymnesiophyte Isochrysis galbana, the cryptophytes Teleaulax sp. and Rhodomonas salina, the raphidophyte Heterosigma akashiwo, and the dinoflagellates Heterocapsa rotundata and A. carterae). However, it did not feed on larger algal species that had ESDs ≥12 μm (e.g. the dinoflagellates Prorocentrum minimum, Heterocapsa triquetra, Scrippsiella trochoidea, Alexandrium tamarense, Prorocentrum micans, Gymnodinium catenatum, Akashiwo sanguinea, and Lingulodinium polyedrum) or the small diatom Skeletonema costatum. The specific growth rates for P. shiwhaense feeding upon A. carterae increased rapidly with increasing mean prey concentration before saturating at concentrations of ca. 350 ng C/ml (5,000 cells/ml). The maximum specific growth rate (i.e. mixotrophic growth) of P. shiwhaense on A. carterae was 1.097/d at 20 °C under a 14:10 h light–dark cycle of 20 μE/m²/s, while its growth rate (i.e. phototrophic growth) under the same light conditions without added prey was ?0.224/d. The maximum ingestion and clearance rates of P. shiwhaense on A. carterae were 0.38 ng C/grazer/d (5.4 cells/grazer/d) and 0.7 μl/grazer/h, respectively. The calculated grazing coefficients for P. shiwhaense on co‐occurring Amphidinium spp. was up to 0.07/h (i.e. 6.7% of the population of Amphidinium spp. was removed by P. shiwhaense populations in 1 h). The results of the present study suggest that P. shiwhaense can have a considerable grazing impact on algal populations.