Composite Trace Fossil Assemblage in a Distal Carbonate Setting from the Tethys (Middle Jurassic,Betic Cordillera,Southern Spain)

Ichnological analysis of a Middle Jurassic carbonate surface from the Betic Cordillera (southern Spain) reveals a complex trace fossil assemblage, including softground Ophiomorpha, firmground Arenicolites, Thalassinoides and Gastrochaenolites, and hardground Trypanites as well as possible Gastrochaenolites. The ecological replacement in the macrobenthic community is interpreted according to successive suites that are controlled mainly by substrate consistency. Variations in composition and abundance of trace fossils between suites can be ecologically and/or taphonomically determined.     

Active versus passive restoration of tallgrass prairie in the U.S. Midwest: plant species diversity and assemblage,net primary production and soil carbon sequestration

We investigated the plant species diversity, community assemblage, net primary production and soil carbon sequestration in an old field (OF), which went through passive restoration with spontaneous secondary succession, and a restored prairie (RP), which went through active restoration with reintroduction of native plants. The passive restoration in OF did not attain as high diversity and richness of plant species as did in RP. Our NMS (nonmetric multidimensional scaling) ordination revealed a clear divergence of RP and OF vegetation with dissimilar species compositions to separate paths of succession trajectory. The spontaneous succession in OF has made very little progress due to a potentially strong inhibitory priority effect of invasive plants. The belowground biomass in the high-diversity RP was 1.3× higher than the low-diversity OF. We found no measurable difference in soil C sequestration between RP and OF at this time, possibly due to edaphic factors, lack of legumes, or both. Human intervention is needed for restoring abandoned croplands—highly disturbed, fragmented and isolated habitats—to tallgrass prairies in the U.S. Midwest. Our recommended intervention includes but is not limited to removal of exotic plants, further augmentation of native plants (particularly legumes), and periodic burns.     

Zooplankton assemblages in two reservoirs: one subjected to accentuated water level fluctuations,the other with more stable water levels

The abundance, composition and dynamics of zooplankton were followed in two reservoirs of the River Douro catchment. The Serra Serrada Reservoir is subject to marked fluctuations in water levels. The highest values of total phosphorus, soluble reactive phosphorus, nitrate, water colour and chlorophyll a were found during the minimum level phase. Rotifera was dominant except in late summer and autumn when the cladoceran Ceriodaphnia quadrangula or the copepod Tropocyclops prasinus replaced them as the dominant zooplankton. Among the rotifers the most common taxa were Keratella cochlearis, Conochilus sp. and Asplanchna priodonta. Maximum rotifer density was about 80,000 ind m⁻³ in 2000, 200,000 ind m⁻³ in 2001 and 100,000 ind m⁻³ in 2002. Among the crustacean zooplankton C. quadrangula achieved densities of up to 45,000 ind m⁻³ and T. prasinus, up to 80,000 ind m⁻³. Canonical correspondence analysis revealed a strong contribution of the variation in the stored water volume, temperature, total phosphorus, chlorophyll, nitrates, and water transparency to the observed, significant association between zooplankton assemblage and environmental variables. In the Azibo Reservoir, fluctuations in water level are smaller. Only total phosphorus, cholorophyll and conductivity varied seasonally. Cladocera and Copepoda were dominant during the whole study period. The most abundant taxa were Ceriodaphnia pulchella, Daphnia longispina, Diaphanosoma brachyurum, Bosmina longirostris and Copidodiaptomus numidicus. Cladocera achieved densities of up to 25,000 ind m⁻³ and Copepoda up to 15,000 ind m⁻³. Rotifera in general reached densities of up to 6,000 ind m⁻³. On the basis of canonical correspondence analysis only temperature and conductivity were significantly associated with zooplankton assemblage.     

Fish assemblage of a traditional fishery and the seasonal variations in diet of its most abundant species Wallago attu (Siluriformes: Siluridae) from a tropical floodplain

The fish assemblage of a traditional Kata fishery and the stomach contents of Wallago attu were studied over a period of one year from a large floodplain system in Bangladesh. A total of 19 species of fish and 2 species of shrimp were recorded. W. attu (9.7–17.8%), Mystus vittatus (6.0–11.3%), M. aor (5.0–12.1%), Amblypharyngodon mola (4.4–9.3%) and Mastacembelus armatus (3.5–10.5%) dominated the catch. W.␣attu occupied the top position in abundance throughout the year, followed by M. vittatus and M. aor. Bagridae, Siluridae and Cyprinidae were three major families that contributed respectively 21.0, 17.4 and 16.1% of the total catch. Considerable seasonality was observed in the abundance of different fishes. A total of 14 different prey items were recorded, belonging to three major groups (fish, prawn and plant matters). The fish fed on at least eight species of small fishes (A. mola, M. vittatus, M. cavasius, Puntius stigma, P. ticto, Puntius sp., Glossogobius guris, and Heteropneustes fossilis) and some other unidentified small fishes. Other major prey items were small prawn, fish and prawn remains, and macroalgae. A. mola was the most important food item, contributing 23.7% of the total amount of diet by weight and 19.9% by frequency of occurrence. A. mola was followed by unidentified small prawn (13.7%), M. vittatus (13.1%), and unidentified small fishes (8.8%) by weight and by unidentified small fishes (15.9%), fish remains (12.5%), and M.␣vittatus (12.3%) by occurrence. Of the major diet categories, fish contributed 74.3% of the total diet by weight and 80.9% by occurrence, prawn contributed 18.5% by weight and 11.0% by occurrence and plants contributed 7.2% by weight and 8.1% by occurrence. A. mola and small shrimps were positively selected by W. attu. We concluded that W. attu is a piscivorous predator with potential impacts on prey fish communities; we also hypothesized that a specialized food-web based on the Kata fishery exists in and around the Katas which is of particular ecological significance.     

Telomere length regulation in budding yeasts

Telomeres are the nucleoprotein caps of chromosomes. Their length must be tightly regulated in order to maintain the stability of the genome. This is achieved by the intricate network of interactions between different proteins and protein–RNA complexes. Different organisms use various mechanisms for telomere length homeostasis. However, details of these mechanisms are not yet completely understood. In this review we have summarized our latest achievements in the understanding of telomere length regulation in budding yeasts.     

Comparison of early passage, senescent and hTERT immortalized endothelial cells

The need for standardized experimental conditions to gain relevant and reproducible results has increased the demand for well characterized continuously growing cell lines that exhibit the characteristics of their normal counterparts. Immortalization of normal human cells by ectopic expression of the catalytic subunit of human telomerase (hTERT) has shown to result in highly differentiated cell lines. However, the influence of the increased telomerase activity on the protein expression profile was not investigated so far. Therefore, we have immortalized human umbilical vein endothelial cells (HUVECs) by hTERT overexpression and compared them to their normal early passage and senescent counterparts. This study, including a proteomic approach, shows that ectopic hTERT expression leads to a stable growing cell line. Although these cells are highly differentiated, the protein expression profile of the cell line is different to that of normal early passage and senescent cells.     

Climate-mediated mechanical changes to post-disturbance coral assemblages

Increasingly severe storms and weaker carbonate materials associated with more acidic oceans will increase the vulnerability of reef corals to mechanical damage. Mechanistic predictions based on measurements of colony mechanical vulnerability and future climate scenarios demonstrate dramatic shifts in assemblage structure following hydrodynamic disturbances, including switches in species' dominance on the reef and thus potential for post-disturbance recovery. Larger colonies are more resistant to factors such as disease and competition for space, and complex morphologies support more associated reef species. Future reefs are thus expected to have lower colony abundances and be dominated by small and morphologically simple, yet mechanically robust species, which will in turn support lower levels of whole-reef biodiversity than do present-day reefs.