Biotransformation of chlorpyrifos and bioremediation of contaminated soil

Five aerobic consortia capable of degrading chlorpyrifos as a sole carbon source in aqueous medium showed degradation in the range of 46–72% after 20 days. Pseudomonas fluorescence, Brucella melitensis, Bacillus subtilis, Bacillus cereus, Klebsiella species, Serratia marcescens and Pseudomonas aeroginosa, isolated from these consortium, showed 75–87% degradation of chlorpyrifos as compared to 18% in control after 20 days of incubation. Bioremediation of chlorpyrifos-contaminated soil with P. fluorescence, B. melitensis, B. subtilis and P. aeroginosa individually showed 89%, 87%, 85% and 92% degradation, respectively, as compared to 34% in control after 30 days. Population dynamics of the introduced isolates based on antibiotic resistance survival and REP-PCR indicated 60–70% survival based on antibiotic resistance, but only 35–45% of the inoculated population based on REP-PCR. During bioremediation studies, 3,5,6-trichloro-2-pyridinol (TCP) was detected as metabolite of chlorpyrifos degradation by P. aeroginosa after 20 days, which was utilized and disappeared after 30 days. Whole-cell studies also showed that P. aeroginosa gave TCP as the product of chlorpyrifos degradation, which was further metabolized to unknown polar metabolites.

Scientific relevance

Potential application in sites for effective in situ bioremediation of chlorpyrifos, a neurotoxic insecticide widely used in India.     

Petal Development in Lotus japonicus

Previous studies have demonstrated that petal shape and size in legume flowers are determined by two separate mechanisms, dorsoventral (DV) and organ internal (IN) asymmetric mechanisms, respectively. However, little is known about the molecular mechanisms controlling petal development in legumes. To address this question, we investigated petal development along the floral DV axis in Lotus japonicus with respect to cell and developmental biology by comparing wild‐type legumes to mutants. Based on morphological markers, the entire course of petal development, from initiation to maturity, was grouped to define 3 phases or 13 stages. In terms of epidermal micromorphology from adaxial surface, mature petals were divided into several distinct domains, and characteristic epidermal cells of each petal differentiated at stage 9, while epidermal cells of all domains were observed until stage 12. TCP and MIXTA‐like genes were found to be differentially expressed in various domains of petals at stages 9 and 12. Our results suggest that DV and IN mechanisms interplay at different stages of petal development, and their interaction at the cellular and molecular level guides the elaboration of domains within petals to achieve their ideal shape, and further suggest that TCP genes determine petal identity along the DV axis by regulating MIXTA‐like gene expression.     

海岛棉GbTCP14基因的克隆与表达分析

以海岛棉‘新海21号’为试验材料,根据陆地棉GhTCP14基因序列,设计1对引物,通过RT-PCR技术获得海岛棉GbTCP14核苷酸序列,开放阅读框长1 221bp,编码406个氨基酸,分子式C1892H2950N572O620S16,预测分子量为44.134 6kD,等电点为6.88,氨基酸序列包含1个高度保守的TCP结构域及4个低丰度复杂区。GbTCP14蛋白氨基酸序列与其他物种TCP14氨基酸序列比对表明,海岛棉GbTCP14蛋白与其他植物中的TCP14蛋白共同具有一个高度保守的TCP结构域,序列之间的一致性较高。进化树分析表明,海岛棉GbTCP14基因与木本棉GaTCP14基因分布在同一分支上。实时荧光定量PCR表明,海岛棉GbTCP14基因在开花后第15天时表达量最高,在第5~20天时相对表达量比其他时期较高,第25天时相对表达量最低。在不同组织中花瓣和花萼中表达量较高,根和茎中表达量一般,叶组织中表达量最低。通过酵母系统转录激活分析显示,GbTCP14蛋白不具有转录活性。     

甘薯基因组 TCP转录因子鉴定与逆境胁迫表达分析

基于甘薯( Ipomoea batatas ( L.) Lam.)全基因组序列, 利用生物信息学方法鉴定筛选了全基因组中的TCP( teosinte branched1/cincinnata/proliferating cell factor)转录因子, 并分析了甘薯苗期在蔓割病菌胁迫及块根储藏期低温胁迫下TCP基因的...     

Visualization of the NMDA recognition site in rat and mouse spinal cord by [3H]CGS 19755in vitro autoradiography

Summary The possibility to visualize the NMDA recognition site with [³H]CGS 19755in vitro autoradiography was evaluated in rat brain and spinal cord sections and thereafter used to study the distribution of the NMDA recognition site in rat and mouse spinal cord. The [³H]CGS 19755 binding was concentrated to the dorsal horn, in particular to the substantia gelatinosa. Notable binding was also seen in the intermediate area and ventral horn, while some binding was observed in the funiculi. No major differences were seen in [³H]CGS 19755 binding at various levels of the rat or mouse spinal cord, although a more dense binding was seen in the mouse. A similar distribution of the [³H]CGS 19755 specific binding and the NMDA receptor associated ion-channel site, labeled with [³H]TCP, was found in the mouse spinal cord. Taken together, our data indicate that the NMDA recognition site can be visualized in rat and mouse spinal cord byin vitro [³H]CGS 19755 autoradiography.Abbreviations NMDA N-methyl-D-aspartate - CGS 19755 Cis-4-phosphonomethyl-2-piperidine carboxylic acid - D-AP5 D(—)-2-Amino-5-phosphonopentanoic acid - TCP N-(1-2-thienylcyclohexyl)-3,4-piperidine - MK-801 (±)-5-Methyl-10,11-dihydro-5H-dibenzo[a,d]cyclohepten-5,10-imine maleate - AMPA -Amino-3-hydroxy-5-methyl-isoxazolepropionic acid - kainate 2-Carboxy-3-carboxymethyl-4-isopropenyl pyrrolidine - CGP 39653 D,L-(E)-2-amino-4-propyl-5-phosphonopentenoic acid     

A specific prostaglandin I2 synthetase inhibitor, 3-hydroperoxy-3-methyl-2-phenyl-3H-indole.

Inhibitory effects of 3-hydroperoxy-3-methyl-2-phenyl-3H-indole(HPI) on prostaglandin endoperoxide synthase(EC 1.14.99.1) and prostaglandin I₂(PGI₂) synthetase were compared with those of 15-hydroperoxy-5,8,11,13-eicosatetraenoic acid, namely, 15-hydroperoxyarachidonic acid(15-HPAA) and tranylcypromine (TCP). Sheep seminal vesicle microsomes were used as a source of prostaglandin endoperoxide synthase and bovine aortic microsomes as that of PGI₂ synthetase. 15-HPAA and HPI inhibited PGI₂ synthetase with IC₅₀s of 5 × 10^?7 and 3.5 × 10^?6 M, respectively, whereas neither compound had effect on prostaglandin endoperoxide synthase at the concentration inhibiting PGI₂ synthetase by 90%. TCP was a weak(IC₅₀ = 5 × 10^?4M) PGI₂ synthetase inhibitor with low specificity.     

Utilization of microbial community potential for removal of chlorpyrifos: a review

Chlorpyrifos (CP) is the most commonly used pesticide in agricultural fields worldwide. Exposure to CP and its metabolites creates severe neuron-disorders in human beings. Improper handling and uncontrolled application of CP by farmers have lead to the contamination of surface and ground water bodies. Biodegradation offers an efficient and cost effective method for the removal of CP and other toxic organophosphorus pesticides from the contaminated environment. The degradation of CP by various microorganisms has been investigated by several researchers over the past few years. This review presents a critical summary of the recent published results on the biodegradation of CP. A diverse range of bacterial species such as Agrobacterium sp., Alcaligenes faecalis, Enterobacter sp. Arthrobacter sp. Bacillus pumilus, Pseudomonas sp. etc., fungal species like Trichoderma viridae, Aspergillus niger, Verticillium sp., Acremonium sp. Cladosporium cladosporiodes, etc. and certain algal species viz. Chlorella vulgaris, Spirulina platensis, Synechocystis sp., etc., have been shown to degrade CP. The efficacy of these communities for CP degradation in batch and continuous modes has also been discussed but more studies are required on continuous reactors. Also, the available published information on kinetics of biodegradation of CP along with the available results on molecular biological approaches are discussed in this work.