Local cryostimulation acutely preserves maximum isometric handgrip strength following fatigue in young women

Several types of cryostimulation have been recently proposed to rapidly lower skin temperature therefore gaining a possible neuro/muscular recovery after strenuous exercise or, more generally, in sports. Local cryostimulation may be a viable and relatively portable tool to obtain physiological benefits in previously-efforted muscular districts. However, cohesive and standardized cryo-exposure protocols are lacking as well as the righteous procedure to efficaciously combine duration, treatments and temperature in relation to desirable effects on muscular strength. In this randomized-controlled study, fifty young women were tested for maximum isometric handgrip strength, before and after exhausting contractions.Following the fatiguing protocol, the intervention group (cryo, n = 25, 24.7 ± 2.5 years, BMI 21.7 ± 1.8 kg/m²) underwent a 6-min local cryostimulation (−160 °C) on the extensor-flexor muscles of the dominant arm, while control-matched peers sat rested in a thermo-neutral room (22 ± 0.5 °C). Handgrip tests were repeated at baseline (T0), after cryostimulation (T1), and 15 min after T1 (T2). Throughout the protocol, the AUC of the strength performance was significantly higher in the cryo- compared to control group (P = 0.006). In particular, following fatigue and cryostimulation, the cryo group preserved higher strength at T1 with respect to controls (26.8 ± 2.8 vs 23.9 ± 2.8 kg, Bonferroni's post-hoc, P < 0.01). Likewise, ventral and dorsal temperature, recorded with a thermal camera, were lower in cryo- than control group (P < 0.0001).In conclusion, a brief session of local cryostimulation may acutely preserve maximal isometric force in young women following a fatiguing protocol. These findings may have implications in orchestrating strategies of district muscular recovery.     

Preimplantation genetic diagnosis of β-thalassemia using real-time polymerase chain reaction with fluorescence resonance energy transfer hybridization probes

Preimplantation genetic diagnosis (PGD) is employed increasingly to allow transfer of embryos to the uterus in assisted reproduction procedures. There are three stages of biopsy: polar bodies, one or two blastomeres from the cleavage-stage embryos, and trophectoderm cells (∼5 cells) from the blastocyst-stage embryos. Validation of polymerase chain reaction (PCR)-based assays are challenging because only limited genetic material can be obtained for PGD. In the current study, we modified a valid single-cell PCR protocol for PGD using real-time PCR assay with fluorescence resonance energy transfer (FRET) hybridization probes followed by melting curve analysis. We optimized and clinically applied the protocol, permitting molecular genetic analysis to amplify a specific region on the beta-globin (HBB) gene for a couple, carriers of two mutations: c.-78A>G and c.52A>T. Among a total of eight embryos obtained after ovarian stimulation, a single blastomere per embryo at the six- to eight-cell stage was biopsied. This PGD method showed that four embryos were unaffected, two embryos were selected for transfer, and one pregnancy was achieved. Finally, a healthy male baby was delivered at 38 weeks’ gestation. The results obtained using the new method, FRET hybridization probes, were compared with findings using an existing method, primer extension minisequencing.     

入侵植物喜旱莲子草和本地种接骨草光合生理特征对增温响应的差异

利用红外加热器模拟增温,比较入侵植物喜旱莲子草和本地种接骨草的光合特性对增温响应的差异,以预测气候变暖背景下入侵植物的入侵潜力,并为筛选替代控制植物提供依据。结果表明:增温导致喜旱莲子草和接骨草的叶绿素a/b值分别比对照显著提高6.21%和降低5.55%。无论增温与否,接骨草的叶绿素b含量显著高于喜旱莲子草,而叶绿素a/b值则相反。增温导致喜旱莲子草净光合速率显著提高9.23%,由于气孔导度增大引起蒸腾速率大幅度增加,使得其水分利用效率比对照显著降低10.64%。增温仅导致接骨草的气孔导度显著增加10.95%,而对其他气体交换特征无显著影响。对照条件下,尽管接骨草的气孔导度和胞间CO_2浓度分别显著低于喜旱莲子草7.03%和4.57%,但是前者的净光合速率和水分利用效率分别显著高于后者10.30%和11.92%。增温条件下,两种植物的净光合速率和气孔导度无显著差异,由于接骨草的蒸腾速率显著低于喜旱莲子草18.02%,故其水分利用效率显著高于后者26.45%。增温、物种及其两者的交互作用对光补偿点、光饱和点、最大净光合速率、暗呼吸速率和初始量子效率等光响应参数影响均不显著。总之,对照条件下,接骨草凭借较高的叶绿素b含量、净光合速率和水分利用效率,比喜旱莲子草具有更强的光合能力。但增温后,接骨草的光合优势被削弱。研究从光合生理角度证明接骨草有望作为喜旱莲子草的替代控制植物,但是未来气候变化背景下喜旱莲子草的入侵潜力可能增强。     

Prediction of methylated CpGs in DNA sequences using a support vector machine

DNA methylation plays a key role in the regulation of gene expression. The most common type of DNA modification consists of the methylation of cytosine in the CpG dinucleotide. At the present time, there is no method available for the prediction of DNA methylation sites. Therefore, in this study we have developed a support vector machine (SVM)-based method for the prediction of cytosine methylation in CpG dinucleotides. Initially a SVM module was developed from human data for the prediction of human-specific methylation sites. This module achieved a MCC and AUC of 0.501 and 0.814, respectively, when evaluated using a 5-fold cross-validation. The performance of this SVM-based module was better than the classifiers built using alternative machine learning and statistical algorithms including artificial neural networks, Bayesian statistics, and decision trees. Additional SVM modules were also developed based on mammalian- and vertebrate-specific methylation patterns. The SVM module based on human methylation patterns was used for genome-wide analysis of methylation sites. This analysis demonstrated that the percentage of methylated CpGs is higher in UTRs as compared to exonic and intronic regions of human genes. This method is available on line for public use under the name of Methylator at http://bio.dfci.harvard.edu/Methylator/.     

长白山林区核桃楸种群数量动态变化的研究

运用种群年龄结构、存活曲线统计和Leslie模型对长白山核桃楸种群在水胡林、针阔混交林、核桃楸占优杂木林和杂木林4种不同群落类型中种群数量动态变化进行了研究和预测。结果表明,核桃楸种群表现出衰退型的年龄结构特点,幼苗和幼树比例较小,种群在幼年期死亡率较高,反映出核桃楸种群15~20龄在个体经历了比较强烈的环境筛作用;Leslie模型预测显示,核桃楸幼苗数量和种群总数量在今后35年基本呈下降趋势,除在核桃楸占优的林分中种群维持增长外,在其它3中森林类型都表现出衰退趋势。因此,促进核桃楸的天然更新、加强幼苗幼树的抚育工作对长白山地区核桃楸种群的发展至关重要。     

Validation of discrete time-to-event prediction models in the presence of competing risks

Clinical prediction models play a key role in risk stratification, therapy assignment and many other fields of medical decision making. Before they can enter clinical practice, their usefulness has to be demonstrated using systematic validation. Methods to assess their predictive performance have been proposed for continuous, binary, and time-to-event outcomes, but the literature on validation methods for discrete time-to-event models with competing risks is sparse. The present paper tries to fill this gap and proposes new methodology to quantify discrimination, calibration, and prediction error (PE) for discrete time-to-event outcomes in the presence of competing risks. In our case study, the goal was to predict the risk of ventilator-associated pneumonia (VAP) attributed to Pseudomonas aeruginosa in intensive care units (ICUs). Competing events are extubation, death, and VAP due to other bacteria. The aim of this application is to validate complex prediction models developed in previous work on more recently available validation data.     

Continuous fixed-bed column study and adsorption modeling: Removal of cadmium (II) and lead (II) ions in aqueous solution by dead calcareous skeletons

The sorption of Cd(II) and Pb(II) ions was conducted in a continuous fixed-bed column by using dead calcareous skeletons (CS). The column performances were evaluated by varying the adsorbent bed height, influent flow rate and metals initial concentration. The breakthrough curve for the bed height indicated that a longer bed column prolonged the life span of the column with a maximum capacity of 26.447 and 38.460 mg/g for the Cd(II) and Pb(II) column, respectively. The increased flow rate and initial concentration caused the column exhaustion time to occur earlier. The experimental column data were also expressed in column adsorption models, namely, the Thomas, Yoon–Nelson and Adam–Bohart models. The Thomas model fitted well with the Cd(II) data with the correlated curve (r² > 0.9). The Yoon–Nelson model was selected to predict the 50% breakthrough time achieved by the column system and provided the estimated breakthrough time for the columns that were not exhausted during the operation. The Adam–Bohart model was applicable for the initial part of adsorption with the saturation concentration data at the equilibrium. The saturation index of aragonite and calcite depicted that dissolution of calcium occurred in the aqueous solution. The experimental and theoretical data were correlated with a significant relationship trend (p < 0.01), which showed that the trend of experimental data fit well with the modeling trend. The trends of both the experimental and theoretical data were strongly and significantly correlated due to involving the column parameters and the components of CS.     

甘南高山林线岷江冷杉—杜鹃种群结构与动态

高山林线是一种典型的生态交错带,是对气候反映最敏感的地区之一。甘肃南部高山林线区域主要以原始岷江冷杉种群和杜鹃种群为优势种,通过对岷江冷杉和杜鹃种群建立静态生命表,绘制存活曲线描述其结构特征,利用种群数量动态预测时间序列分析定量研究未来的发展趋势。结果显示:(1)岷江冷杉种群幼苗比较丰富,能很好的维持种群个体的自疏死亡,存活曲线呈Deevey-Ⅲ型;杜鹃种群幼苗缺乏,存活曲线趋向于Deevey-Ⅰ型;死亡曲线和危险率曲线都随着龄级的增加而增加,杜鹃种群的死亡率在各个龄级一直大于岷江冷杉种群,危险率在Ⅱ龄级以后杜鹃种群也始终大于岷江冷杉种群。(2)岷江冷杉种群结构动态变化指数Vpi大于修正后的种群结构动态变化指数V′pi且大于0,而杜鹃种群结构动态变化指数Vpi小于修正后的种群结构动态变化指数V′pi且小于0,则岷江冷杉种群属于增长型,杜鹃种群属于衰退型,岷江冷杉、杜鹃随机干扰极大值分别为0.027、0.011,说明二者对外界干扰均比较敏感。(3)杜鹃种群时间序列预测为前期幼苗比较缺乏,中期稳定,后期衰退的动态特征,而岷江冷杉种群表现出各龄级时间变化较小,幼苗个体数较多,种群为稳定增长型,岷江冷杉更能适应甘肃南部高山林线区域当前环境。     

海南岛热带山地雨林林分生物量估测方法比较分析

本文通过对海南岛热带山地雨林林分生物量估测方法的比较分析,表明材积转换法不适宜估算海南岛热带山地雨林林分生物量,其结果与皆伐法相比较一般偏高20％—40％;而用实测资料建立的生物量回归模型,对原始林林分有较好的估测结果,除树枝和树叶生物量外,树干、树皮及地上部分生物量的回归模型值,与皆伐法的结果比较,相对误差一般在±10％以内,为允许误差范围,而对热带山地雨林的更新林生物量的估测则效果较差,应建立相应的估测模型。平均木法有工作量小的优点,且误差也在16％以下,但要注意取样的树种多样性和取样强度,在实际中应当慎用。另外本文对测定热带山地雨林生物量(原始林)的所需面积大小问题作了研究,提出了生物量-面积曲线的概念,确定其最小调查面积为2500m~2以上。