Detection and minimization of H-phosphonate side reaction during phosphopeptide synthesis by a post-assembly global phosphorylation strategy

Summary In the course of solid-phase synthesis of phosphopeptides by a post-assembly global phosphorylation strategy, the corresponding H-phosphonate peptides form as byproducts. We describe model studies to investigate this side reaction as a function of reaction conditions, and use this information to develop conditions that minimize the problem, i.e., use of dibenzyl N,N-di-isopropyl phosphoramidite for phosphitylation, followed immediately by oxidation with anhydrous tert-butyl hydroperoxide in dry tetrahydrofuran under argon, and final acidolytic cleavage.This work was taken in part from the Ph.D. Theses of E.A. Ottinger (1994) and Q. Xu (1996), University of Minnesota, Minneapolis, MN, U.S.A. Preliminary presentations of portions of this work were made at the Twenty-Second European Peptide Symposium, Interlaken, Switzerland, September 13–19, 1992, see Ref. 1, at the 14th American Peptide Symposium, Columbus, OH, U.S.A., June 18–23, 1995, and at the Fourth International Symposium on Solid Phase Synthesis & Combinatorial Chemical Libraries, Edinburgh, Scotland, U.K., September 12–16, 1995, see Ref. 2. The title side reaction was first discussed for tyrosine (see Refs 1 and 3), but all of the mechanism studies discussed herein are for serine and threonine.Amino acid symbols denote the l-configuration, and abbreviations for amino acids and peptides follow rules of the IUPAC-IUB Commission of Biochemical Nomenclature [J. Biol. Chem., 247 (1972) 977].     

Surface water chemistry characteristics in the Lake Storgrønningen drainage area, Høylandet, during periods of high and low discharge

The surface water chemistry of Høylandet has beenstudied by performing two synoptic surveys, duringhigh runoff in the autumn of 1986 and during a lowflow period in the summer of 1988. Based on watersamples of up to 38 chemical variables from 75 sites,analyses show considerable variation in the chemicalcomposition. There is a strong altitude gradient, i.e.very dilute poorly buffered waters dominate at higherelevations near the timberline while progressivelyhigher salt content and alkalinities arecharacteristic at lower altitudes more dominated byforests. The influence of mires is less pronounced.The overall water quality is of oligotrophic naturewith low concentrations of strong acid anions andmetals known to be enriched under acidifiedconditions. The natural pH gradients are considerablebut with no indication of anthropogenic acidification.The data provide little support for the hypothesisthat in-catchment production of organically derivedacidity leads to acid runoff, which in thesecatchments appears compensated by increasedweathering. The findings are in general accordancewith other Høylandet catchment studies. It isconcluded that this area may serve as a representativepristine surface runoff analogue for catchmentscurrently affected by atmospheric deposition of strongmineral acids.     

Mild phosphorus stress in barley and a related low-phosphorus-adapted barleygrass: Phosphorus fractions and phosphate absorption in relation to growth

Barleygrass ( Hordeum leporinum ) from Australian low-P (phosphorus) soils and commercial barley ( H. vulgare ) with high fertilizer requirements were grown in solution culture at 3 levels of P supply. The high-P-adapted barley produced more biomass at all levels of P supply and was more responsive to added P in terms of rate of tillering, rate of leaf production, final leaf size, and therefore total shoot weight compared to barleygrass. In both species root: shoot ratio decreased in response to improved tissue P status, even at P levels where total biomass did not respond to P supply. Removal of endosperm reserves of barley reduced total biomass to a greater extent than it altered phosphate absorption rate, thus increasing tissue P status and making plants less responsive to added P. Similarly, barleygrass had a slower growth rate but a comparable P absorption rate to that of barley. Thus barleygrass also accumulated tissue P and was unresponsive to added P. All phosphorus chemical fractions increased in response to improved tissue P status, but to differing extents (inorganic-P > nucleic acid-P > lipid-P > ester-P), suggesting that all P fractions (particularly inorganic P) serve, in part, a storage function. Both barleygrass and barley without endosperm had higher concentrations of all P fractions (particularly inorganic P) than did unaltered barley, but this was due entirely to their higher P status (due to slow growth) rather than to any major difference in P metabolism between species. We conclude that slow growth is more important than interspecific differences in P metabolism, P absorption, or efficiency of P utilization in explaining the success of barleygrass and other low-P-adapted species on infertile soils.     

Biological effects of long-term exposure of rats to 970-MHz radiofrequency radiation

Rats (N = 16) exposed individually in circularly polarized waveguides to 970-MHz electromagnetic radiation (SAR=2.5 mW/g, 22 h daily for 70 consecutive days) had significantly higher serum levels of triglycerides, albumin, and total protein compared with sham-irradiated controls. No difference was observed in the weights, hematologic profile, or in vitro lymphocyte responses to mitogens between these two groups. The higher serum levels of triglycerides in radiofrequency-radiation-exposed rats suggest a non-specific stress reaction.     

Classification and ecological characterization of coniferous forest phytogeocoenoses of Hokkaido,Japan

Coniferous forest phytogeocoenoses of Hokkaido Island, Japan, were studied to classify them based on vegetation characteristics, to analyse their soils, to correlate the vegetation and soil characteristics, and to provide some ecological interpretation for the phytogeocoenosis differentiation and establishment. Five forest types were distinguished based on the vegetation structure, each of which was comparable to plant association of Krajina (1960); 1. the moss type, 2. the Sasa kurilensis type, 3. the Sasa senanensis type, 4. the Carex sachalinensis type, and 5. the Dryopteris crassirhizoma type. Soil base status indicated by pH, electric conductivity, amount of calcium and magnesium, and base saturation showed a fair correlation with the forest types. The forest types were, therefore, arranged along a soil nutritional gradient. The moss type developed in the least fertile habitats whereas the Dryopteris crassirhizoma type in the most fertile habitats, and others were in between the two. It was suggested that in the island, where climate was humid with excess of soil water throughout a year, soil nutritional regime, more specifically availability of bivalent cations which tended to be removed by the excessive soil water, seemed to be a critical factor to differentiate and establish the forest types.This study was financially supported by the Science Research Grant of the (Monbusho) Japanese Goverment (Grant No. 60540422).     

Environmental factors influencing zooplankton species composition of lakes in north-central Ontario,Canada

To assess the relative importance of lake chemistry, morphometry and zoogeography on limnetic zooplankton, we collected zooplankton, water, and morphometric data from 132 headwater Canadian Shield lakes in 6 regions across north-central Ontario. A subset of these lakes (n = 52) were fished with gill nets. We clustered lakes based on their zooplankton species composition (presence/absence). Discriminant analysis was employed to determine how well lake characteristics could predict zooplankton community types. Correct classification of zooplankton communities for three models ranged from 72 to 91%. Lake size, lake location, and buffering capacity were ranked as the most important factors separating lake groups. Fish abundance (CPUE) was not significant in distinguishing between zooplankton communities. Though the range of lake sizes was limited (1–110 ha), larger lakes tended to support more species. Lake location (zoogeography) also influenced species composition patterns. Although Algoma lakes tended to be larger (\-x = 18.0 ha, other lakes \-x = 2.5 ha), they supported relatively depauperate zooplankton communities. Buffering capacity was ranked third in the discriminant analysis models, but pH and alkalinity were not significantly different between lake groups.     

The influence of ionic composition on the distribution of nematode species in springs of the province of Granada (Spain)

The ionic composition of 38 mineral springs in the province of Granada (Spain), and the distribution of 45 species of nematodes belonging to orders Monhysterida, Araeolaimida, Chromadorida and Enoplida were examined. Water chemistry is used to make two diagrams representing anionic and cationic composition. Diagrams for anionic composition (given the greater variance seen in the springs considered) are used to illustrate the distribution of individual species. The results obtained from species distribution and the correlation between species made it possible to group species which could be associated with springs where each of the anions considered predominated. A greater number of species groups was found to inhabit springs in which chloride concentrations was less than 50% of the total concentration of anions.     

Cohesive sediment transport: emerging issues for toxic chemical management

The association of many environmentally sensitive chemicals and their transformation products with mineral and organic substrates is of considerable importance for environmental monitoring, prediction and management purposes in rivers and their basins. Our understanding of these relationships is poor. This paper reviews processes of particular concern, including the physical behaviour of fine-grained (< 63 µm) sediment in freshwater; the role of flocculation as a transport vector; the processes that control freshwater flocculation including microbiological factors; the uncertainty in conventional sediment transport models for predicting pathways of sediment-associated chemistry; the relationship between suspended sediment and toxicity in the water column; and the partitioning of chemicals between the sediment, organic and water phase, including the significance of these in predicting chemical transport on suspended matter.     

Porewater chemistry of inorganic nitrogen compounds in the eastern Skagerrak (NE North Sea)

Porosity, Eh and interstitital nitrogen compounds profiles are given for four locations in the eastern Skagerrak. Sediments down to 30 cm depth, i.e. postindustrial in age, were analysed. The results together with a detailed age determination (²¹⁰Pb) suggest a high degree of both lateral and vertical variability as a result of local bottom topography and currents as well as event-controlled sedimentation processes.