Non‐parallel recombination limits cre‐loxP‐based reporters as precise indicators of conditional genetic manipulation

Cre/LoxP‐mediated recombination allows for conditional gene activation or inactivation. When combined with an independent lineage‐tracing reporter allele, this technique traces the lineage of presumptive genetically modified Cre‐expressing cells. Several studies have suggested that floxed alleles have differential sensitivities to Cre‐mediated recombination, which raises concerns regarding utilization of Cre‐reporters to monitor recombination of other floxed loci of interest. Here, we directly investigate the recombination correlation, at cellular resolution, between several floxed alleles induced by Cre‐expressing mouse lines. The recombination correlation between different reporter alleles varied greatly in otherwise genetically identical cell types. The chromosomal location of floxed alleles, distance between LoxP sites, sequences flanking the LoxP sites, and the level of Cre activity per cell all likely contribute to observed variations in recombination correlation. These findings directly demonstrate that, due to non‐parallel recombination events, commonly available Cre reporter mice cannot be reliably utilized, in all cases, to trace cells that have DNA recombination in independent‐target floxed alleles, and that careful validation of recombination correlations are required for proper interpretation of studies designed to trace the lineage of genetically modified populations, especially in mosaic situations. genesis 51:436–442. © 2013 Wiley Periodicals, Inc.     

The Slice Culture Method for Following Development of Tooth Germs In Explant Culture

Explant culture allows manipulation of developing organs at specific time points and is therefore an important method for the developmental biologist. For many organs it is difficult to access developing tissue to allow monitoring during ex vivo culture. The slice culture method allows access to tissue so that morphogenetic movements can be followed and specific cell populations can be targeted for manipulation or lineage tracing.In this paper we describe a method of slice culture that has been very successful for culture of tooth germs in a range of species. The method provides excellent access to the tooth germs, which develop at a similar rate to that observed in vivo, surrounded by the other jaw tissues. This allows tissue interactions between the tooth and surrounding tissue to be monitored. Although this paper concentrates on tooth germs, the same protocol can be applied to follow development of a number of other organs, such as salivary glands, Meckel''s cartilage, nasal glands, tongue, and ear.     

Dependence of Subjective Traverse Length on Velocity of Moving Tactile Stimuli

Two series of experiments were performed to assess the effects of stimulus velocity on human subjects' perception of the distance traversed by a moving tactile stimulus. In all experiments, constant-velocity stimuli were applied to the dorsal surface of the left forearm; velocities ranging between 1.0 and 256 cm/sec were used. In some experiments the stimuli moved from distal to proximal over the skin, and in others they moved from proximal to distal. The length of skin contacted by the moving stimulus was defined by a plate having an aperture of 4.0 × 0.5 cm.

In the first series of experiments, subjects were required to compare the distance traversed by a test stimulus delivered 2 sec after a standard stimulus, and also to report the on-locus and the off-locus of the brushing stimulus. In the second series of experiments, the subjects rated the perceived distance on the skin using a free-magnitude-estimation procedure. The data from both series of experiments defined the same relationship between stimulus velocity and perceived stimulus distance. More specifically, although the length of skin contacted by the stimulus was the same at all velocities, subjects' estimates of stimulus distance decreased with increasing stimulus velocity. In addition, the function relating estimates of stimulus distance to velocity was flat for velocities between 5 and 20 cm/sec, but possessed an appreciable negative slope at lower and higher velocities.

It is interesting that the plateau of the relationship between perceived stimulus distance and velocity occurred within the range of velocities that human subjects employ to scan textured surfaces; it also corresponded precisely with the range of stimulus velocities at which the directional sensitivity of somatosensory cortical neurons and human subjects is optimal.     

SPA患者循环EPCs及SDF-1-alpha与冠状动脉侧支循环的相关性分析

目的：研究冠状动脉严重狭窄稳定型心绞痛(Stable angina pectoris, SPA)患者循环内皮祖细胞（endothelial progenitor cells, EPCs）及基质细胞衍生因子（SDF）-1-alpha与冠状动脉侧支循环（CCC）形成的相关性,以期为治疗冠心病提供新的思路。方法：选择 2012 年8 月到2014 年12月在我院就诊的88 例冠状动脉严重狭窄的稳定型心绞痛患者（CCC 良好40 例、不良48 例）,均采集 外周血测定EPC 数量、体外生成血管能力,并用ELISA 法检测其血浆SDF-1alpha 水平,采用直线相关和Pearson 检验分析CCC良好 与不良者各指标间及与CCC 分级的相关性;将所有入选病例随机分为6 组,并分离外周血单个核细胞并分别加入不同的培养 液,培养7 天后体外测定EPCs 数量以及生成血管的能力,并通过ELISA 法检测培养液上清中VEGF 的蛋白水平。结果：CCC 不 良组EPCs 数量、体外生成血管能力及SDF-1-alpha水平均明显低于CCC 良好组（P<0.05）。体外生成血管能力、循环EPCs 数量以及 SDF-1alpha水平均与CCC分级呈现显著的正相关性（r =0.72、0.67、0.79,均P<0.05）;循环EPCs 数量、SDF-1alpha水平以及体外生成血 管能力亦均呈现显著正相关性（r =0.78、0.62,均P<0.05）。与PBS、SDF-1alpha+ AMD3100 及SDF-1alpha+ KI8751 干预物质比较,SDF-1琢 能够呈剂量依赖性的明显提高EPCs 数量、增强其体外生成血管的能力及VEGF水平（P<0.05）。结论：冠状动脉严重狭窄稳定型 心绞痛患者循环EPCs及SDF-1琢与CCC 形成有关,VEGF可能参与该过程。     

辛伐他汀联合运动训练治疗COPD稳定期合并代谢综合征患者的临床研究

目的:探讨辛伐他汀联合运动训练治疗慢性阻塞性肺疾病(COPD)稳定期合并代谢综合征患者的临床疗效,为临床治疗提供指导。方法:按照随机数字表法将2013年9月-2015年3月我院收治的COPD稳定期合并代谢综合征患者分为A、B组和对照组,A组患者在常规治疗的基础上联合辛伐他汀和运行训练,B组患者在常规治疗的基础上以辛伐他汀治疗,对照组患者仅以常规治疗。治疗后6个月,比较三组患者的临床治疗效果。结果:A、B组治疗后的血清白细胞介素-6(IL-6)白细胞介素-8(IL-8)以及肿瘤坏死因子-α(TNF-α)水平低于治疗前,差异有统计学意义(P0.05),对照组治疗后的IL-6、IL-8及TNF-α水平与治疗前差异无统计学意义(P0.05),治疗后A组的IL-6、IL-8及TNF-α水平明显低于B组,差异有统计学意义(P0.05)。A组的胰岛素抵抗指数(HOMA-IR)低于B组、对照组,差异有统计学意义(P0.05);A、B组的颈-股动脉脉搏波速度(CFPWV)低于对照组,差异有统计学意义(P0.05)。A、B组治疗后的改良医学研究委员会量表(m MRC)低于对照组,A组m MCR低于B组,差异有统计学意义(P0.05),A、B组治疗后的6 min步行距离(6MWD)高于对照组,A组6MWD高于B组,差异有统计学意义(P0.05)。结论:辛伐他汀联合运动训练能明显降低COPD稳定期合并代谢综合征患者的炎症性反应,改善患者的胰岛素抵抗和大动脉弹性,提高临床治疗效果。     

Proteomic analysis of Rac1 signaling regulation by guanine nucleotide exchange factors

The small GTPase Rac1 is implicated in various cellular processes that are essential for normal cell function. Deregulation of Rac1 signaling has also been linked to a number of diseases, including cancer. The diversity of Rac1 functioning in cells is mainly attributed to its ability to bind to a multitude of downstream effectors following activation by Guanine nucleotide Exchange Factors (GEFs). Despite the identification of a large number of Rac1 binding partners, factors influencing downstream specificity are poorly defined, thus hindering the detailed understanding of both Rac1's normal and pathological functions. In a recent study, we demonstrated a role for 2 Rac-specific GEFs, Tiam1 and P-Rex1, in mediating Rac1 anti- versus pro-migratory effects, respectively. Importantly, via conducting a quantitative proteomic screen, we identified distinct changes in the Rac1 interactome following activation by either GEF, indicating that these opposing effects are mediated through GEF modulation of the Rac1 interactome. Here, we present the full list of identified Rac1 interactors together with functional annotation of the differentially regulated Rac1 binding partners. In light of this data, we also provide additional insights into known and novel signaling cascades that might account for the GEF-mediated Rac1-driven cellular effects.     

太湖贡湖湾食物网特征研究

应用稳定性同位素技术(13C和15N)研究了太湖贡湖湾食物网特征, 结果显示由于食物来源变化多样性影响, 导致贡湖的食物网结构和营养级关系变化较为复杂, 贡湖主要生物类群13C、15N值表现出较大的种间差异。消费者13C值从摇蚊幼虫的-32.3到锯齿米虾的-22.1, 其值大小与营养级的关系没有规律性。消费者平均15N值从褶纹冠蚌的10.3到位于顶端间下鳙的19.0, 随营养级位置而升高。群落中所有种类的15N、13C值之间没有相关性(r=0.1835, P0.05), 表明该食物网是非线性食物网。研究结果验证了杂食性生物有机体普遍存在于富营养化的贡湖水域生态系统中, 且13C结果表明, 浮游植物、固着藻类以及沉水植物为贡湖食物网中大多数生物有机体的主要碳源。贡湖食物链长度为4.44营养级。     

长江上游中华沙鳅食性特征的C、N同位素分析

应用C、N稳定同位素技术并结合肠含物分析对我国长江上游特有鱼类中华沙鳅（Sinibotia superciliaris）不同发育阶段食性进行了探究。结果显示:中华沙鳅13C、15N平均值分别为（22.480.85）、（10.090.69）;不同体长段13C（P0.05,F=2.44）、15N（P0.01,F=6.06）值差异显著,暗示了中华沙鳅在生长发育过程中存在食性转变现象;体长80 mm的个体主要摄食水生昆虫和藻类,属杂食偏肉食性鱼类;体长80 mm的个体,其食物以虾类、淡水壳菜和水生昆虫为主,属肉食性鱼类。中华沙鳅营养级位于2.02-2.47,与长江上游多种底栖型鱼类生态位相似;食物竞争可能是导致其摄食强度弱和资源量下降的原因之一。研究结果可为长江上游中华沙鳅野生资源保护提供理论参考。