Molecular tools in marine ecology

Molecular tools have diverse applications in marine ecology. In microbial systems, DNA sequences of rRNA and other genes have identified a variety of novel lineages of bacteria inhabiting marine environments that have resisted traditional culture methods. However, relatively few natural populations have been characterized due to the rather labor-intensive methodologies employed. Recent technological developments such as in situ PCR and flow cytometry promise to greatly enhance the speed at which microbial taxa can be identified and enumerated in field collected water and substrate samples; such advances will allow future work to employ the spatial and temporal field sampling required to monitor the impact of natural and anthropogenic changes in the environment. This approach also holds promise for examining physiological status of field collected cells, garnering information on such elusive parameters as growth rates and the extent of nutrient limitation under natural conditions. Studies of macrobiota have similarly benefited from the use of molecular approaches to species identification. This has been particularly true with regard to distinguishing among larval forms of closely related taxa which are nearly identical morphologically. Genetic variation within species assayed by molecular tools has been useful in examining the stability of populations through time and in assessing patterns of recruitment to geographically separated populations. Enhanced understanding of these ecological problems will also require intensive spatial and temporal monitoring of both larval and adult populations. Often, the newer techniques based on DNA sequence variation have practical advantages over allozyme techniques: e.g., PCR allows assay of minute quantities of DNA that may come from ethanol preserved samples. However, when ample allozyme variation exists to address a given issue, these older techniques may be favored on a variety of criteria, including speed and cost. Hence, choice of methodology should be based on the expected efficiency of a given approach to a specific problem rather than the apparent sophistication of the method itself.     

Crustacean zooplankton species richness and associations in reservoirs and ponds of Aguascalientes State, Mexico

We report the species of crustacean zooplankton found in 19 resevoirs and ponds that were sampled at on at least two occasions in Aguascalientes State, Mexico, at a latitude of about 21°30 North Latitude. We collected a total of 33 cladoceran taxa, 15 calanoid and cyclopoid copepods, an Ergasilus copepod, 2 anostracans, one notostracan species and an amphipod. All these taxa had previously been reported in Mexico. As in more temperate areas, there was a significant correlation between the species richness and lake size. The species-area relationship for Aguascalientes was indistinguishable from that of more northerly lakes. The two most common associations of zooplankton species were (1) those small species that occurred with fish: Daphnia parvula, Diaphanosoma birgei, Leptodiaptomus siciloides, Mastigodiaptomus albuquerquensis, and Thermocyclops inversus, and (2) the large Daphnia schodleri that occurred with the predator Notonecta, in the absence of fish. With minor variations, these two associations also occur throughout temperate North America.     

A native nitrogen-fixing shrub facilitates weed invasion

Invasions by exotic weedy plants frequently occur in highly disturbed or otherwise anthropogenically altered habitats. Here we present evidence that, within California coastal prairie, invasion also can be facilitated by a native nitrogen-fixing shrub, bush lupine (Lupinus arboreus). Bush lupines fix nitrogen and grow rapidly, fertilizing the sandy soil with nitrogen-rich litter. The dense lupine canopy blocks light, restricting vegetative growth under bushes. Heavy insect herbivory kills lupines, opening exposed nitrogen-rich sites within the plant community. Eventual re-establishment of lupine occurs because of an abundant and long-lived seed bank. Lupine germination, rapid growth, shading and fertilization of sites, and then death after only a few years, results in a mosaic of nutrient-rich sites that are available to invading species. To determine the role of bush lupine death and nitrogen enrichment in community composition, we examined nutrient dynamics and plant community characteristics within a site only recently colonized by lupine, comparing patches where lupines had recently died or were experimentally killed with adjacent areas lacking lupine. In experimentally killed patches, instantaneous pool sizes of exchangeable ammonium and nitrate nitrogen were higher than in adjacent sites free of lupine. Seedlings of the introduced grass Bromus diandrus accumulated 48% greater root biomass and 93% more shoot biomass when grown in a greenhouse in soil collected under experimentally killed lupines compared to B. diandrus seedlings grown in soil collected at least 1 m away from lupines. At the end of the spring growing season, total above-ground live plant biomass was more than twice as great in dead lupine patches as in the adjacent lupine-free grassland, but dead lupine patches contained 47% fewer plant species and 57% fewer native species. Sites where lupines have repeatedly died and reestablished during recent decades support an interstitial grassland community high in productivity but low in diversity, composed of mostly weedy introduced annual plants. In contrast, at a site only recently colonized by bush lupines, the interstitial grassland consists of a less productive but more diverse set of native and introduced species. We suggest that repeated bouts of lupine germination, establishment, and death can convert a rich native plant community into a less diverse collection of introduced weeds.     

Temporal changes in host adaptation in the pea aphid, Acyrthosiphon pisum

Abstract.

• 1 Temporal changes in host adaptation were followed in a local population of the pea aphid, Acyrthosiphon pisum. Aphid clones were collected in one alfalfa and one clover field at three different times. In the spring, first-generation females were collected. Later, in the autumn, females belonging to the last parthenogenetic generation were collected. Lastly, sexual females were collected after mating in autumn and allowed to produce eggs which were hatched. The performance was evaluated on alfalfa and clover. The spring-collected individuals were also assessed on peas.
• 2 On the overwintering hosts clover and alfalfa, the clones performed best on the plant of origin, i.e. negative correlations in performance. Correlations between performance on the temporary summer host, pea, and that on clover/alfalfa were weak or nonsignificant.
• 3 Significant variation in host performance was found within both host fields at spring, which is a prerequisite for changes in clone composition due to selection/migration.
• 4 The clones from alfalfa showed an increase in mean performance on alfalfa between spring and autumn, whereas no changes among the clones from the clover field were observed. This difference in seasonal response between the two fields could have been the result of larger variation in performance among the alfalfa clones and/or a differential tendency to migrate among clones in both fields.
• 5 After sexual recombination in the autumn, mean performance in the alfalfa field returned to the spring level, probably as a result of emergence of new genetic combinations. In the clover field, mean performance did not change significantly over time.

     

Carabid life-cycle strategies and climate change: a study on an altitude transect

Abstract.

• 1 There was little overlap in the species composition of carabid beetle assemblages sampled below 450 m and above 800 m on an altitude transect and the first axis of a DECORANA ordination was closely correlated with altitude (r₁₁= 0.93, P < 0.001), probably reflecting the differing temperature requirements of different species.
• 2 Life-cycle strategies of two low-altitude species, found predominantly below 600 m, and two species caught above 600 m a.s.l., have been determined, using mandible wear to identify whether the females breed in the calendar year that they emerge as adults or in the year following.
• 3 Nebria salina has an annual cycle at 630 m. Pterostichus madidus and Calathus fuscipes were both biennial at altitudes above 300 m although predominantly annual at low altitude. N.gyllenhali was biennial above 600 m and it is not known whether it is able to switch to an annual cycle at low altitude.
• 4 Both N.salina and N.gyllenhali ceased activity soon after emergence, an adaptation which preserves their mandibles from wear.
• 5 At altitudes of 305 m and 430 m, P.madidus and C.fuscipes entered the breeding season with 33% and 56% reduction in mandible tip length, possibly reducing their reproductive output.
• 6 The necessity for relatively sharp mandibles on entry into the breeding season may restrict the capacity of carabids to respond to a temperature change by switching from annual to biennial cycles, and vice versa, adding support to the suggestion that carabids are more likely to respond to climate change by shifting distributions than by physiological adaptation.

     

Comparison of fish assemblages among an artificial reef, a natural reef and a sandy-mud bottom site on the shelf off Iwate, northern Japan

Synopsis Fish assemblages at an artificial reef site, a natural reef site and a sandy-mud bottom site, on the shelf (depth 130 m) off Iwate Prefecture, northern Japan, were surveyed by using a bottom trammel net from May 1987 to March 1993. A total of 12 173 fishes of 48 species were recorded. Physiculus maximowiczi was dominant and comprised 69% of the total numerical abundance. Total fish number was lowest in March at all the 3 sites when P. maximowiczi migrated to deeper and warmer waters. Assemblage equitability and species diversity also varied seasonally in accordance with the abundance fluctuation of P. maximowiczi. P. maximowiczi, Alcichthys alcicornis and Hexagrammos otakii were more abundant at the artificial reef and natural reef sites, while Dexistes rikuzenius and Hemitripterus villosus were more abundant at the sandy-mud bottom site; total fish abundance was largest at the artificial reef site mainly due to the large number of P. maximowiczi. Species richness was similar among sites, but equitability, and consequently species diversity, was lowest at the artificial reef site. The main effect of the artificial reef seemed the attraction of P. maximowiczi from nearby bottoms, especially from natural rocky reefs; its large abundance determined the structure of the artificial reef fish community.     

Continuity,Collapse or Metamorphosis? Demographic anthropology and the study of change within human populations.Foreword

this first paper introduces the topic of the volume, outcomes of a symposium organised at the 13th ICAES held in Mexico in August 1993. It briefly reminds of the convergence between anthropology and demography up to date and stresses on the need of real transdisciplinary work in this challenging domain. The aim of the symposium was to make a contribution on the central theme chosen by the congress — the cultural and biological dimensions of global change — while examining the place of demographic anthropology in the study of change. The papers presented at the symposium have been organised in three parts which form the present volume: the composition of population, the choice of spouse and mobility, the reproduction and dynamics of populations. The basic mechanisms of change are considered through examples at the level of local populations. This also leads to question the definitions of human groups and to make a “declaration” stressing on the importance of individual heterogeneity and the arbitrariness and reductive nature of any grouping of individuals, stating therefore the misapprehension of the most recent scientific work inherent to the rationale of programs of “ethnic cleasing”. Translated from the french by prof. Derek F. Roberts     

Mammal diversity and environment evolution during the Plio-Pleistocene in East Africa

Human evolution began in East Africa four million years ago, with a transition from an arboreal state to a more terrestrial one. This evolution seems to be correlated with a large environmental change in East Africa around 2.5 m.y. due to a major climatic change leading to drier and cooler conditions. Cenogram analysis (a graphical representation of community structure) can be used to reconstruct the vegetation cover at a regional scale, and to infer the changing climatic conditions. Using cenogram sequences of different sites along the Rift Valley, we were able to determine the regional ecological context in which mammals and hominids have evolved in East Africa during the last 3 million years. Between 3.5 and 2 m.y., during a general climatic change, successive faunas of South Tanzania reflect the progressive opening of their environment. In contrast around Lake Turkana a mosaic of isolated dry and wet habitats were present throughout this period. At this time, the Rift seems to have been spatially structured in several basins isolated from one other, and isolated faunas experienced separate speciation events (particularly with the appearance ofHomo genus). After 2 m.y., the disappearance of the isolating barriers on one hand, and a regional increase in aridity, on the other hand, led to more homogenous faunas arising throughout the region. Replacements of mammal species occurred (especiallyHomo erectus replacingHomo habilis) and several others mammal species, including australopithecines, disappeared during this same period.     

Coming to America: Acclimation in macaque body structures and Bergmann’s rule

I analyzed somatometric measurements from subsets of the Texas and Oregon transplanted troops of Japanese macaques(Macaca fuscata) to reveal secular changes in body size and shape. Body weights of the Texas population (N = 59) are lower than those of the Oregon population(N = 49) and the founding population from Arashiyama. The adult weights of the Oregon population are significantly higher than the founding population from Mihara. There are significant differences in adult circumferential measures and in skinfolds, which are correlated with the increased weight of the Oregon macaques. The adult Texas macaques have longer limb segments in comparison with the adult Oregon troop members, while the latter have significantly longer heads and trunks. Examination of the developing morphological trends through regression analyses on the complete sample suggests distinctive growth patterns for each population. Members of the Texas population start with smaller initial measurements but hold a steeper growth pattern for limb segments, while the Oregon macaques start larger in most measures and show lower growth rates. I argue that these differences in both somatometry and growth patterns are related to the differing climatic conditions under which the translocated macaques have lived. This set of analyses supports the basic arguments for Bergmann’s rule and Allen’s rule.