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991.
The NADPH-dependent reduction of some photosynthetic electron carriers in the dark, and the reduction of NADP+ associated
with the glycolytic sequence and the oxidative pentose phosphate pathway in chloroplasts are reviewed. The postulated pathways
of electron transports sensitive and insensitive to antimycin A are also evaluated. It is proposed that the electron flow,
predominantly through cytochrome bf complex, may be also involved in the pathway of NADPH-dependent and antimycin A-insensitive back electron transport. An information
on the chlororespiration in higher plants is also included.
This revised version was published online in June 2006 with corrections to the Cover Date. 相似文献
992.
Ji Guo Su Xiao Ming Han Xiao Zhang Yan Xue Hou Jian Zhuo Zhu Yi Dong Wu 《Journal of biomolecular structure & dynamics》2016,34(3):560-571
Protein collective motions play a critical role in many biochemical processes. How to predict the functional motions and the related key residue interactions in proteins is important for our understanding in the mechanism of the biochemical processes. Normal mode analysis (NMA) of the elastic network model (ENM) is one of the effective approaches to investigate the structure-encoded motions in proteins. However, the motion modes revealed by the conventional NMA approach do not necessarily correspond to a specific function of protein. In the present work, a new analysis method was proposed to identify the motion modes responsible for a specific function of proteins and then predict the key residue interactions involved in the functional motions by using a perturbation approach. In our method, an internal coordinate that accounts for the specific function was introduced, and the Cartesian coordinate space was transformed into the internal/Cartesian space by using linear approximation, where the introduced internal coordinate serves as one of the axes of the coordinate space. NMA of ENM in this internal/Cartesian space was performed and the function-relevant motion modes were identified according to their contributions to the specific function of proteins. Then the key residue interactions important for the functional motions of the protein were predicted as the interactions whose perturbation largely influences the fluctuation along the internal coordinate. Using our proposed methods, the maltose transporter (MalFGK2) from E. Coli was studied. The functional motions and the key residue interactions that are related to the channel-gating function of this protein were successfully identified. 相似文献
993.
Kari O. Raivio Cheri S. Lazar Michael A. Becker 《Biochimica et Biophysica Acta (BBA)/General Subjects》1981,678(1):58-64
During the growth cycle of normal fibroblasts and of fibroblasts deficient in glucose-6-phosphate dehydrogenase activity, the concentration of 5-phosphoribosyl-1-pyrophosphate and of Pi, as well as the activity of 5-phosphoribosyl-1-pyrophosphate synthetase, decreased to stable values in confluent cultures. A high degree of correlation (0.89 and 0.91 for two normal and 0.69 for one glucose-6-phosphate dehydrogenase-deficient cell strain, respectively) was shown between intracellular Pi and 5-phosphoribosyl-1-pyrophosphate concentrations under varying culture and incubation conditions. 5-phosphoribosyl-1-pyrophosphate concentrations were elevated in normal fibroblasts incubated with methylene blue only if intracellular Pi levels were high. Neither methylene blue nor 6-aminonicotinamide, singly, affected intracellular Pi concentrations. However, when normal cells were pretreated with 6-aminonicotinamide and then with methylene blue, intracellular Pi decreased, 5-phosphoribosyl-1-pyrophosphate was depleted, and its rate of generation decreased. Under similar conditions, glucose-6-phosphate dehydrogenase-deficient fibroblasts maintained unaltered Pi levels, and 5-phosphoribosyl-1-pyrophosphate concentration and generation were slightly increased. The decrease in intracellular Pi in normal cells after the combined treatment was commensurate with an accumulation of 6-phosphogluconate, which did not take place in mutant cells. The changes in 5-phosphoribosyl-1-pyrophosphate synthesis, whether due to the stage of growth or various experimental manipulations, were always concordant with changes in intracellular Pi level. The regulatory role of Pi is consistent with the known enzymic properties of 5-phosphoribosyl-1-pyrophosphate synthetase. 相似文献
994.
995.
996.
《Journal of molecular biology》2021,433(3):166756
The pathogens Vibrio cholerae and Haemophilus influenzae use tripartite ATP-independent periplasmic transporters (TRAPs) to scavenge sialic acid from host tissues. They use it as a nutrient or to evade the innate immune system by sialylating surface lipopolysaccharides. An essential component of TRAP transporters is a periplasmic substrate binding protein (SBP). Without substrate, the SBP has been proposed to rest in an open-state, which is not recognised by the transporter. Substrate binding induces a conformational change of the SBP and it is thought that this closed state is recognised by the transporter, triggering substrate translocation. Here we use real time single molecule FRET experiments and crystallography to investigate the open- to closed-state transition of VcSiaP, the SBP of the sialic acid TRAP transporter from V. cholerae. We show that the conformational switching of VcSiaP is strictly substrate induced, confirming an important aspect of the proposed transport mechanism. Two new crystal structures of VcSiaP provide insights into the closing mechanism. While the first structure contains the natural ligand, sialic acid, the second structure contains an artificial peptide in the sialic acid binding site. Together, the two structures suggest that the ligand itself stabilises the closed state and that SBP closure is triggered by physically bridging the gap between the two lobes of the SBP. Finally, we demonstrate that the affinity for the artificial peptide substrate can be substantially increased by varying its amino acid sequence and by this, serve as a starting point for the development of peptide-based inhibitors of TRAP transporters. 相似文献
997.
Effects of different N/P ratios on several root parameters and on net P uptake were studied in winter wheat, Triticum aestivum cv. Starke II, grown in water culture. In the First experiment N/P ratios of (0/4, 2/3, 4/2, 6/1 and 8/0) were used, and plants were harvested at age 3, 5, 8, 11 and 14 days. In the second experiment N/P ratios of 6/1, 10/1, 15/1, 17/1, 20/1 and 25/1 were applied at two different N,P levels. Root length and number were determined using a digitizer connected to a computer. In the first experiment. the 6/1 N/P ratio gave the largest plants at day 14, and growth decreased with decreasing N/P ratio, The same pattern was found fur lateral root length and root number (seminal and lateral). In the second experiment the root weights decreased with increasing N/P ratio within each level. Lateral root number and overall length decreased with increasing N/P ratio at both levels as did the average lateral root length at the high N,P level. At the low N.P level, average lateral root length was about the same at all N/P ratios. Increasing the N/P ratio increased net uptake of P at the low N,P level, but decreased net P uptake at the high N,P level. Net P uptake increased with increasing P concentration in the roots and then decreased with further increase in P concentration. Net P uptake based on calculated root length [m (g root)−1 ] showed no significant deviation from weight-based uptake plots. The effect of N and P on root structure is discussed as well as the interaction of N and P in P uptake. The relevance of a proper basis for expressing root activity is stressed. 相似文献
998.
Silas A. Buck Thomas Steinkellner Despoina Aslanoglou Michael Villeneuve Sai H. Bhatte Victoria C. Childers Sophie A. Rubin Briana R. De Miranda Emma I. O'Leary Elizabeth G. Neureiter Keri J. Fogle Michael J. Palladino Ryan W. Logan Jill R. Glausier Kenneth N. Fish David A. Lewis J. Timothy Greenamyre Brian D. McCabe Claire E. J. Cheetham Thomas S. Hnasko Zachary Freyberg 《Aging cell》2021,20(5)
Age is the greatest risk factor for Parkinson''s disease (PD) which causes progressive loss of dopamine (DA) neurons, with males at greater risk than females. Intriguingly, some DA neurons are more resilient to degeneration than others. Increasing evidence suggests that vesicular glutamate transporter (VGLUT) expression in DA neurons plays a role in this selective vulnerability. We investigated the role of DA neuron VGLUT in sex‐ and age‐related differences in DA neuron vulnerability using the genetically tractable Drosophila model. We found sex differences in age‐related DA neurodegeneration and its associated locomotor behavior, where males exhibit significantly greater decreases in both DA neuron number and locomotion during aging compared with females. We discovered that dynamic changes in DA neuron VGLUT expression mediate these age‐ and sex‐related differences, as a potential compensatory mechanism for diminished DA neurotransmission during aging. Importantly, female Drosophila possess higher levels of VGLUT expression in DA neurons compared with males, and this finding is conserved across flies, rodents, and humans. Moreover, we showed that diminishing VGLUT expression in DA neurons eliminates females'' greater resilience to DA neuron loss across aging. This offers a new mechanism for sex differences in selective DA neuron vulnerability to age‐related DA neurodegeneration. Finally, in mice, we showed that the ability of DA neurons to achieve optimal control over VGLUT expression is essential for DA neuron survival. These findings lay the groundwork for the manipulation of DA neuron VGLUT expression as a novel therapeutic strategy to boost DA neuron resilience to age‐ and PD‐related neurodegeneration. 相似文献
999.
1000.
The influence of phosphate nutrition on H ion efflux from the roots of young rape plants 总被引:3,自引:0,他引:3
Changes in pH around the roots of young rape plants were studied using a nutrient film technique which allowed either part
or all of the root system to be subjected to specific nutrient treatments. The rapidity and direction of change of pH was
assessed by embedding absorbing roots in a thin layer of agar containing bromocresol purple. Measurements were also made with
a pH microelectrode placed next to the roots.
Phosphate-fed plants were deprived of phosphate when 14 days old. Patterns of pH changes round the deprived roots were the
same as with phosphate-fed plants until the plants had been deprived of P for three days, when H ion efflux started in the
terminal portions of the roots. The lengths of root producing acid and amounts of H ion both increased as the plants became
more P deficient. Both P fed and P deprived roots produced HCO3 ions but the net amount of HCO3 ion produced by the P deficient roots fell as did nitrate uptake rates. Cation-anion balances measured at the end of the
experiment showed that uptake of all anions and K decreased in the P deprived plants but uptake of Ca and Mg were little altered.
This resulted in a smaller ratio of anions to cations absorbed which was reflected in the reduced HCO3 ion efflux. 相似文献