Normalizing genes for real-time polymerase chain reaction in epithelial and nonepithelial cells of mouse small intestine

Gene expression studies in intestinal epithelial and stromal cells are a common tool for investigating the mechanisms by which the homeostasis of the small intestine is regulated under normal and pathological conditions. Quantitative real-time PCR (qPCR) is a sensitive and highly reproducible method of gene expression analysis, with expression levels quantified by normalization against reference genes in most cases. However, the lack of suitable reference genes for epithelial cells with different differentiation states and nonepithelial tissue cells has limited the application of qPCR in gene expression studies of small intestinal samples. In this study, 13 housekeeping genes, ACTB, B2M, GAPDH, GUSB, HPRT1, HMBS, HSP90AB1, RPL13A, RPS29, RPLP0,PPIA, TBP, and TUBA1, were analyzed to determine their applicability for isolated crypt cells, villus cells, deepithelialized mucosa, and whole mucosa of the mouse small intestine. Using geNorm and NormFinder software, GUSB and TBP were identified as the most stably expressed genes, whereas the expressions of the commonly used reference genes GAPDH, B2M, and ACTB, and ribosomal protein genes RPL13A, RPS29, and RPLP0 were relatively unstable. Thus, this study demonstrates that GUSB and TBP are the optimal reference genes for the normalization of gene expression in the mouse small intestine.     

Enhancing single-molecule fluorescence with nanophotonics

Single-molecule fluorescence spectroscopy has become an important research tool in the life sciences but a number of limitations hinder the widespread use as a standard technique. The limited dynamic concentration range is one of the major hurdles. Recent developments in the nanophotonic field promise to alleviate these restrictions to an extent that even low affinity biomolecular interactions can be studied. After motivating the need for nanophotonics we introduce the basic concepts of nanophotonic devices such as zero mode waveguides and nanoantennas. We highlight current applications and the future potential of nanophotonic approaches when combined with biological systems and single-molecule spectroscopy.     

Specific binding of sulphated polymers to ram sperm proacrosin

Sulphated polysaccharides and zona pellucida glycoproteins have been shown to bind non-enzymatically to proacrosin, the protein found within the acrosomal vesicle of mammalian spermatozoa. The mechanism of this interaction has been investigated using ¹²⁵I-fucoidan to probe purified ram sperm proacrosin. Results show that (a) binding of' ¹²⁵I-fucoidan to proacrosin is inhibited only by sulphated polymers and (b) recognition is mediated by poly(sulphate) groups and is largely independent of the composition of the polymer chain. It is suggested that a similar mechanism is responsible for the interaction between proacrosin and zona pellueida glycoproteins during the early stages of fertilization in mammals and this process mediates firm binding of spermatozoa to the egg.     

Development of fertilized ovules and their role in the growth of the pea pod

The histological development of fertilized ovules during fruit-set and development in pea ( Pisum sativum L. cv. Alaska) has been investigated. Killing the ovules on day 0 (anthesis) or day 1 prevented fruit-set and resulted in ovary degeneration. When the ovules were destroyed at later stages the ovaries developed, though the rate of growth of the pod was reduced significantly. Pollination in pea occurs normally the day before anthesis, and fertilization of the egg cell 32 to 48 h later. The first divisions of the zygote and endosperm nuclei started simultaneously (ca 48 h after pollination) but the endosperm developed more rapidly than the embryo; the embryo sac cavity was lined with free endosperm nuclei at the time of beginning suspensor elongation. Extracts of endosperm and ovule coats from ovules at day 7 after anthesis showed fruit-set activity in pea, the latter material having about 3 times more activity than the former per ovule basis. These results indicate that fertilization of the ovule is necessary for fruit-set in pea, and that compounds which induce fruit-set are probably synthesized in the ovules following fertilization.     

Identification of ortho-hydroxy anilide as a novel scaffold for lysine demethylase 5 inhibitors

Fe(II)/α-ketoglutarate-dependent lysine demethylases (KDMs) are attractive drug targets for several diseases including cancer. In this study, we designed and screened ortho-substituted anilides that are expected to function as Fe(II) chelators, and identified ortho-hydroxy anilide as a novel scaffold for KDM5A inhibitors. Treatment of human lung cancer A549 cells with a prodrug form of 4-carboxy-2-hydroxy-formanilide (9c) increased trimethylated lysine 4 on histone H3 level, suggesting KDM5 inhibition in the cells.     

Evaluation of Phytochemical Compositions and Biological Properties of Achillea gypsicola at Different Phenological Stages

Phytochemicals, which are commonly found at different levels in many medicinal plants, are natural strong antioxidants used in traditional medicine. In this research, determination of differences of phytochemical compositions and biological properties were aimed as periodically (pre‐, full and post flowering) and daily (6 am, 1 pm and 8 pm) in Achillea gypsicola Hub.‐Mor . The volatile oils belonging to A. gypsicola were obtained by hydrodistillation and analyzed by gas chromatography‐flame ionization detection (GC‐FID) and gas chromatography‐mass spectrometry (GC/MS). The antimicrobial activities of the volatile oils were determined with disc diffusion method. The microdilution method was used to determine minimum inhibitory concentration (MIC). Total phenolic and flavonoid contents were determined by spectrophotometric methods and antioxidant capacities were evaluated by 2,2‐diphenyl‐1‐picrylhydrazyl (DPPH) free radical, reducing power (RP) and metal chelating activity (MCA) assay. In addition, the phenolic acid and flavonoid compositions were evaluated by reversed phase‐high‐performance liquid chromatography (RP‐HPLC). This study presented a comprehensive report for the first time on evaluation of the phytochemical composition and the biological properties of A. gypsicola at different phenological stages. Thirty‐two compounds, containing the major component as camphor, 1,8‐cineole and borneol, were detected. Designated harvest time for the highest yield of volatile oils was found to be at full flowering stage‐1 pm. It has been observed that the volatile oil composition changes periodically and even daily. Also, in this research, menthol and menthone were found as the composition of volatile oil in Achillea species for the first time. Full flowering stage was found as the richest period in terms of phenolic acid and flavonoid compositions of A. gypsicola for the first time. The species examined in this research showed a high antioxidant and antimicrobial activity in comparison to other studies with Achillea species. The volatile oils exhibited high performances with range of inhibition zones (8.3–42.3 mm) and minimum inhibitory concentration values (2.25—144 μg/ml). Besides, a high correlation between antioxidant activity and phenolic content of A. gypsicola was found. These results suggest that A. gypsicola can be used as a safe source in the cosmetic, food and pharmaceutical industries.     

Pax-6基因在发育中的表达与动物眼的进化

近年在脊椎动物和无脊椎动物中分离出Pax-6基因及其同源基因,这些基因都与动物的眼与神经系统的发育和形态发生有关.本文着重比较了无脊椎动物果蝇、文昌鱼、哺乳动物小鼠和人的Pax-6基因编码蛋白,Pax-6基因在发育过程中的表达,Pax-6与眼进化的关系等几个方面,并介绍Pax-6基因为靶基因的转基因果蝇的上游制作技术和原理.探讨了Pax-6基因作为眼发育的主导基因的作用和时空表达模式的保守性.     

紫背金盘(Ajuga nipponensis)次生物质对桔全爪螨(Panonychus citri)的驱避作用

研究了紫背金盘Ajuga nipponensis Makino各溶剂提取物和部分化合物对桔全爪螨Panonychus citri McGregor雌成螨及其产卵的驱避作用.结果表明,石油醚萃取物、乙酸乙酯萃取物具有较强的生物活性.在0.1 g · L-1时, 石油醚和乙酸乙酯萃取物对该螨处理1d后的产卵忌避率分别为:84.86%、69.88%;2d后为89.49%、82.19%;对雌成螨驱避率分别为:85.08%、68.66%;2d后为50.96%、69.84%.乙酸乙酯萃取物经分离得到四类化合物,结果表明:馏分Ⅰ为长链脂肪酸混合物,具有较强生物活性,2000μg/ml和1000μg/ml处理1d后,产卵忌避率分别为:80.77%、74.77%;2d后为73.81%、72.59%.2000μg/ml处理1d后对雌成螨的驱避率为:69.88%;2d后为74.24%.刺槐素Ⅱ、新克罗烷化合物Ⅲ和β-蜕皮甾酮Ⅳ在2000μg/ml均不表现活性.对馏分Ⅰ中的4个主要化合物单体进行活性测定,结果表明:十六烷酸、十六烷酸甲酯、十六烷酸乙酯和十八烷酸甲酯在2000μg/ml处理时,1d后,产卵驱避率分别为:75.18%、61.76%、59.18%和66.49%;2d后产卵驱避率为:66.67%、31.15%、46.75%和44.84%;雌成螨驱避率分别为:1d后,67.53%、63.79%、59.26%和68.00;2d后,67.23%、43.96%、48.23%和64.19%.在1000μg/ml处理时,1d 后,产卵驱避率分别为:59.21%、59.16%、57.02%和61.40%;1d后,雌成螨驱避率分别为:69.64%、61.43%、55.76%和64.00%.