Emergence and transmission of visual awareness through optical coding in the brain: A redox molecular hypothesis on visual mental imagery

Does the primary visual cortex mediate consciousness for higher-level stages of information processing by providing an outlet for mental imagery? Evidence based on neural electrical activity is inconclusive as reflected in the “imagery debate” in cognitive science. Neural information and activity, however, also depend on regulated biophoton (optical) signaling. During encoding and retrieval of visual information, regulated electrical (redox) signals of neurons are converted into synchronized biophoton signals by bioluminescent radical processes. That is, visual information may be represented by regulated biophotons of mitochondrial networks in retinotopically organized cytochrome oxidase-rich neural networks within early visual areas. Therefore, we hypothesize that regulated biophotons can generate intrinsic optical representations in the primary visual cortex and then propagate variably degraded versions along cytochrome oxidase pathways during both perception and imagery. Testing this hypothesis requires to establish a methodology for measurement of in vivo and/or in vitro increases of biophoton emission in humans' brain during phosphene inductions by transcranial magnetic stimulation and to compare the decrease in phosphene thresholds during transcranial magnetic stimulation and imagery. Our hypothesis provides a molecular mechanism for the visual buffer and for imagery as the prevalent communication mode (through optical signaling) within the brain. If confirmed empirically, this hypothesis could resolve the imagery debate and the underlying issue of continuity between perception and abstract thought.     

基因概念的演绎

“基因”术语的诞生已经有100年之久了。在这过去的100年里, 基因定义经过了许多次修正。基因由最初一个抽象的名词, 最后定义为基因组中一段具体的、可以编码蛋白质或RNA的DNA序列, 并成为了生物学最重要的词汇之一。但随着基因组计划完成, 尤其是“DNA元件百科全书”计划的完成, 基因组组成的复杂性和多样性, 以及其动力学特点对传统分子生物学的基因定义提出了挑战, 因为越来越多的证据表明: DNA水平储存的信息和功能产品之间的关系是非常复杂的, 甚至有人认为应该重新定义基因。文章对基因定义的发展, 近来对基因定义的争论及其研究进展做一论述。     

生物多样性与稳定性机制研究进展

随着全球生物多样性的迅速丧失,生物多样性与生态系统稳定性的关系已成为人类面临的重要科学问题。许多研究表明生物多样性与稳定性存在正相互关系,但其内在机制尚不能被很好地理解并且存在争议。对生物多样性与稳定性的研究历史做简短的回顾,然后根据时间稳定性的计算方法将时间稳定性分为平均值、方差之和以及协方差之和3个统计组成部分,在此基础上对现在常见的生物多样性-稳定性机制进行分类和详细介绍。并对现在生物多样性和稳定研究的争论进行总结。建议未来生物多样性稳定性关系的研究应该建立更加综合的理论,增加实验时间,应用整合分析(meta-analysis)对已发表实验结果进行综合分析,此外,应多关注非生物量/多度的属性,控制物种属性而不是仅仅控制物种的数量。     

Using Role Play to Debate Animal Testing

The use of animals in biomedical research is a socio-scientific issue in which decision-making is complicated. In this article, we describe an experience involving a role play activity performed during school visits to the Barcelona Biomedical Research Park (PRBB) to debate animal testing. Role playing games require students to defend different positions and permit participants to debate and reflect on their personal opinions. A total of 262 students from 15- to 30-years-old participated in the activity. The article presents an analysis of the students’ opinions on this topic before and after performing the activity. Our results show that students actively took part in debate and made use of the new information provided by the game, especially the legal aspects. In conclusion, the role play activity helped participants to create a more informed opinion, stimulated critical thinking and argumentation skills. We encourage science teachers to use role playing games to discuss socio-scientific issues.     

Influence of evolution on the stability of ecological communities

In randomly assembled communities, diversity is known to have a destabilizing effect. Evolution may affect this result, but our theoretical knowledge of its role is mostly limited to models of small food webs. In the present article, I introduce evolution in a two-species Lotka-Volterra model in which I vary the interaction type and the cost constraining evolution. Regardless of the cost type, evolution tends to stabilize the dynamics more often in trophic interactions than for mutualism or competition. I then use simulations to study the effect of evolution in larger communities that contain all interaction types. Results suggest that evolution usually stabilizes the dynamics. This stabilizing effect is stronger when evolution affects trophic interactions, but happens for all interaction types. Stabilization decreases with diversity and evolution becomes destabilizing in very diverse communities. This suggests that evolution may not counteract the destabilizing effect of diversity observed in random communities.     

The effect of insularity on the diversity of land birds in the Fiji islands: implications for refuge design

Ecologists have argued over rules of thumb that could be used to set priorities in configuring systems of reserves for preserving biological diversity. To evaluate these simple strategies, I assembled a particularly large and comprehensive data set on the land birds of the Fiji archipelago. I analyzed the species distribution on 220 islands to compare the running total of species preserved by differènt sequences of adding nature reserves to a hypothetical reserve system, treating each island as if it were a potential reserve. A strategy of maximizing the number of islands contributing to any given reserve area (maximum fragmentation) is much more effective at including species than a strategy of maximizing the size of the island components of a reserve (minimum fragmentation). Nevertheless the maximum fragmentation strategy is not a very good one. It is less effective than many random strategies, especially when about 2–10% of total area is to be set aside as reserve, and when only rare species are considered. A computer program was used to determine an optimal strategy by maximizing the number of additional species added for each unit of area added. This strategy is always substantially more effective at encompassing species diversity than either the maximum or minimum fragmentation strategies. It is suggested that the poor performance of the minimum fragmentation strategy is due principally to the presence of many smaller-island endemics within the Fiji archipelago. More generally, it is argued that the effect of fragmentation on species diversity depends on the geographic scale and isolation of the region under consideration. In these respects the Fiji Archipelago may be a particularly good model for continental reserve systems.     

A comment on the Hill–Turney exchange: from normative antagonism to interdisciplinary collaboration

Amniotic fluid-derived stem (AFS) cells were the first non-embryonic source of pluripotent stem cells discussed in Italy. AFS cells have been defined “ethical stem cells”, a socio-technical label denoting an array of cellular reprogramming techniques, biological artifacts, and somatic stem cells which make it possible to obtain pluripotent stem cells while avoiding the use of human embryos. The alleged pluripotent status of these cells triggered a debate in which pluripotency was re-positioned as the most promising feature of stem cells. This debate was characterized by discursive articulations in which the boundary between multipotency and pluripotency was blurred and a discourse on a duopoly of pluripotency (pertaining both to embryonic and non-embryonic stem cells) ensued. Drawing on qualitative discourse analysis of articles in scientific journals and newspapers, this paper explores the cultural meaning and political uses of these discursive articulations in the Italian stem cell research regulation debate. This paper also examines a set of aporias emerging from the attempt to incorporate ethical stances into the biological ontology of ethical stem cells, and the problem of constructing normativities in the biotechnology field.     

R. A. Fisher, Lancelot Hogben, and the Origin(s) of Genotype–Environment Interaction

This essay examines the origin(s) of genotype–environment interaction, or G × E. “Origin(s)” and not “the origin” because the thesis is that there were actually two distinct concepts of G × E at this beginning: a biometric concept, or G × E_B, and a developmental concept, or G × E_D. R. A. Fisher, one of the founders of population genetics and the creator of the statistical analysis of variance, introduced the biometric concept as he attempted to resolve one of the main problems in the biometric tradition of biology – partitioning the relative contributions of nature and nurture responsible for variation in a population. Lancelot Hogben, an experimental embryologist and also a statistician, introduced the developmental concept as he attempted to resolve one of the main problems in the developmental tradition of biology – determining the role that developmental relationships between genotype and environment played in the generation of variation. To argue for this thesis, I outline Fisher and Hogben’s separate routes to their respective concepts of G × E; then these separate interpretations of G × E are drawn on to explicate a debate between Fisher and Hogben over the importance of G × E, the first installment of a persistent controversy. Finally, Fisher’s G × E_B and Hogben’s G × E_D are traced beyond their own work into mid-20th century population and developmental genetics, and then into the infamous IQ Controversy of the 1970s.