一株产酶真菌Phaeophlebiopsis sp.转录组分析

对从药渣中分离的真菌ZYJHYZ254进行鉴定及产酶活性研究,从转录组分析菌株不同生长时期差异表达基因对其生长发育及产酶调控的影响,以筛选高产木质纤维素水解酶真菌,寻找调控关键基因。鉴定ZYJHYZ254为拟暗射脉菌Phaeophlebiopsis sp.,产酶在第5-7天最高。从生长3 d与7 d的菌丝中共检测到1 232个差异基因,以3 d的菌丝为对照,显著上调、下调基因分别有826及406个,基因注释和GO、KEGG功能富集分析结果表明差异表达基因主要与蛋白质合成、代谢及酶合成相关。此外,共有387个CAZymes基因表达,GH数量最多,约占49.61%,其次为AA (97)与GT (62),约占25.06%与16.02%。GH16 (24个)占GH的12.50%,含量最多,主要编码葡萄糖苷酶、木聚糖酶等,AA中AA3 (37个)占比38.14%,编码氧化酶、脱氢酶等。结果表明ZYJHYZ254中生长3 d与7 d的菌丝经功能富集分析发现差异表达基因主要与蛋白质合成、代谢,以及酶合成相关。进一步研究发现在两个生长时期中CAZymes基因表达最多的是GH16与AA3,预示了该菌葡萄糖苷酶、木聚糖酶、β-半乳糖苷酶、氧化酶与脱氢酶含量最丰富,对降解特殊生物质中的木质纤维素具有重要意义。     

The Role of Ceramide Synthases in the Pathogenicity of Cryptococcus neoformans

1. Download high-res image (192KB)
2. Download full-size image

     

Natural Enemies ofTrapaspp. in Northeast Asia and Europe

Trapa natansis an aquatic plant native to the Old World. In the late 1880s this plant was found to be naturalized in the eastern United States where it has become an important weed. To evaluate the potential of biological control to reduce this weed, surveys for natural enemies ofTrapaspp. were made in Northeast Asia and Europe. In addition, populations ofTrapa japonicain South Korea were monitored for one season to evaluate the occurrence and impact of insect natural enemies. Among the insects found, the leaf beetleGalerucella birmanicawas the most common and damaging species in Asia. It can cause complete defoliation of whole populations of plants. Nymphuline pyralid moths were also common and at times damaging. Both the beetle and the moths feed and develop on unrelated plants and so have no potential as biological control agents ofT. natansin North America. TwoNanophyesweevils were found in Asia which feed in petiole floats of the leaves. They are thought to be specific toTrapabut were not observed to be damaging. Low level populations of polyphagous Homoptera were common. Chironomid midges were also frequently associated with the plants, but for the most part were filter feeders, not herbivores. The greatest impact on the monitored plants in South Korea was by the leaf beetleG. birmanicawhich defoliated most of the plants, causing the mats of plants to sink. In Europe, a similar and related insect fauna was found, but none of the insects was very damaging to the plants. One Italian weevil,Bagous rufimanus,feeds within the fruit stems and might be more damaging at higher than observed population levels. Some diseases were seen on some plants in both regions. European populations ofT. natanshave declined significantly, stimulating conservation efforts. Literature records ofTrapainsects from warm areas are presented. These could be of interest ifT. natansspreads into warmer areas of North America.     

荒漠沙蒿根围AM真菌和DSE的空间分布

2009年7月在内蒙古黑城子北、多伦县城东和正蓝旗元上都遗址3个样地分别从0-10 cm、10-20 cm、20-30cm、30-40 cm和40-50 cm 5个土层采集沙蒿(Artemisia sphaerocephala)根围土壤和根样,系统研究了沙蒿根围AM真菌和DSE(Dark septate endophytes)的空间分布及与土壤因子的相关性。结果表明,沙蒿根系能被AM真菌高度侵染形成典型的I-型(Intermediate type)丛枝菌根,并发育形成泡囊和丛枝结构, 并与DSE形成良好的共生关系,样地生态条件和采样深度对AM真菌分布和活动有显著影响。黑城子样地孢子密度最高,元上都样地泡囊定殖率最高,不同样地间丛枝、菌丝、总定殖率和DSE定殖率无显著差异。孢子密度峰值出现在0-10cm表层土,并随土壤剖面深度增加而降低;泡囊定殖率峰值出现在10-20cm土层;AM真菌其他结构定殖率及DSE定殖率在各土层间差异不显著或变化无规律。孢子密度与AM真菌不同结构定殖率无显著相关性,与各土壤因子极显著正相关。泡囊定殖率与脲酶和碱性磷酸酶极显著负相关,与酸性磷酸酶显著负相关。菌丝定殖率、总定殖率及DSE定殖率与各土壤因子均无显著相关性。土壤碱解N和有机C与脲酶、酸性磷酸酶和碱性磷酸酶极显著正相关;土壤速效P与碱性磷酸酶极显著正相关,与脲酶显著正相关。对沙蒿根系AM真菌和DSE真菌分布和定殖规律的研究,可进一步明确AM真菌和DSE的生态功能,为利用菌根生物技术促进荒漠植被恢复和生态重建提供依据。     

Plant Growth‐promoting Fungus Penicillium oxalicum Enhances Plant Growth and Induces Resistance in Pearl Millet Against Downy Mildew Disease

Plant Growth‐promoting Fungus (PGPF) Penicillium oxalicum was isolated from rhizosphere soil of pearl millet and was tested for its ability to promote growth and induce systemic resistance in pearl millet against downy mildew disease. The fungal isolate P. oxalicum UOM PGPF 16 was identified as P. oxalicum using ITS sequencing and morphological analysis and sequence was deposited at NCBI with accession number KF150220. Pearl millet susceptible seeds were treated with three different inducers (CS, CF and LCF) of PGPF P. oxalicum and all the inducers significantly reduced the downy mildew disease and enhanced plant growth. Among the inducers tested, CS treatment recorded highest seed germination of 91% and 1427 seedling vigour followed by LCF and CF treatments. The vegetative growth parameter and NPK uptake studies under greenhouse conditions revealed that the CS treatment of P. oxalicum remarkably enhanced the parameters tested when compared to control plants. A significant disease protection of 62% and 58% against downy mildew disease was observed in plants pretreated with CS of P. oxalicum under greenhouse and field conditions, respectively. The spatio‐temporal studies revealed that inducers P. oxalicum required a minimum of 3 days for developing maximum disease resistance which was maintained thereafter. The maximum Peroxidase (POX) activity (62.7 U) was observed at 24 h in seedlings treated with CS of PGPF P. oxalicum and the activity gradually reduced at later time points after pathogen inoculation. Chitinase (CHT) activity was significantly higher in inducer treated seedlings when compared to control seedlings inoculated with pathogen after 48 h and remained constant at all time points.     

PCR with degenerate primers amplifies a subgenomic DNA fragment from the endoglucanase gene(s) of Torula thermophila, a thermophilic fungus

The aim of this study was to enable the polymerase chain reaction (PCR) amplification of DNA fragments within endoglucanase gene(s) of Torula thermophila, by using degenerate primers so that the amplified fragment(s) could be used as homologous probe(s) for cloning of full-length endoglucanase gene(s). The design of the degenerate PCR primers was mainly based on the endoglucanase sequences of other fungi. The endoglucanase gene sequence of Humicola insolens was the only sequence from a thermophilic fungus publicly available in the literature. Therefore, the endoglucanase sequences of the two Trichoderma species, Trichoderma reesei and Trichoderma longibrachiatum, were used to generalize the primers. PCR amplification of T. thermophila genomic DNA with these primers resilied in a specific amplification. The specificity of the amplified fragment was shown by Southern hybridization analysis using egl3 gene of T. reesei as probe. This result suggested that the degenerate primers used in this study may be of value for studies aimed at cloning of endoglucanase genes from a range of related fungi.     

Host identity and functional traits determine the community composition of the arbuscular mycorrhizal fungi in facultative epiphytic plant species

The epiphytic vascular mycobiota is scarce and facultative in semi-arid Mediterranean ecosystems. However, unlike in soil conditions, little is known about the factors driving mycorrhizal communities in epiphytic environments. Here, we investigated the arbuscular mycorrhizal fungi (AMF) harboured by 31 plant species occurring on the trunks of Phoenix dactylifera. We wanted to ascertain if host identity and plant functional traits shape mycorrhizal communities. Specifically, we tested the plant life-cycle (perennial versus annual), the plant life-form (herbaceous versus woody), the plant origin (exotic versus native) and the plant species. The plant affiliation to species strongly influenced the AMF community composition. Plant life-form and plant life-cycle also shaped indicator taxa. The AMF structure differed between annual and perennial species and higher AMF richness was detected in perennial plants. The epiphytic plants associated with AMF irrespective of whether they were native or not, probably because here no functional differences derive from plant origin.     

Production of epoxide hydrolases in batch fermentations of <Emphasis Type="Italic">Botryosphaeria rhodina</Emphasis>

The filamentous fungus Botryosphaeria rhodina (ATCC 9055) was investigated related to its ability for epoxide hydrolase (EH) production. Epoxide hydrolase activity is located at two different sites of the cells. The larger part is present in the cytosol (70%), while the smaller part is associated to membranes (30%). In media optimization experiments, an activity of 3.5 U/gDW for aromatic epoxide hydrolysis of para-nitro-styrene oxide (pNSO) could be obtained. Activity increased by 30% when pNSO was added to the culture during exponential growth. An increase of enzyme activity up to 6 U/gDW was achieved during batch-fermentations in a bioreactor with 2.7 l working volume. Evaluation of fermentations with 30 l working volume revealed a relation of oxygen uptake rate to EH expression. Oxygen limitation resulted in a decreased EH activity. Parameter estimation by the linearization method of Hanes yielded Km values of 2.54 and 1.00 mM for the substrates S-pNSO and R-pNSO, respectively. vmax was 3.4 times higher when using R-pNSO. A protein purification strategy leading to a 47-fold increase in specific activity (940 U/mgProtein) was developed as a first step to investigate molecular and structural characteristics of the EH.     

食用菌加工产业研究现状与前景

食用菌加工是利用物理、化学和生物方法处理食用菌子实体或菌丝体,生产食用菌制品。它可以解决食用菌从生产到商品出售所存在的时间矛盾,提高食用菌的商品价值。详细介绍了食用菌的干制加工、盐渍加工及罐藏加工技术,概括了食用菌深加工产业的发展现状及研究进展,提出了对食用菌加工的展望。