Human skeletal remains from Mumba Rock Shelter,Northern Tanzania

During their expeditions in Northern Tanzania in 1934/38, Ludwig and Margit Kohl-Larsen (discoverer of Eyasi and Garusi hominids)excavated i. a. the Mumba Rock Shelter. This important excavation yielded human skeletal remains of 18 individuals. The most relevant results of the morphological analyses are presented here. According to the affinities and absolute dating (hominid IX, 3700 B. C. ), the present study supports recent indications of the presence of Negroid groups in East Africa at an early stage in Later Stone Age times.     

Rock selection for nesting inProformica longiseta Collingwood, 1978 (Hymenoptera,Formicidae) in a Mediterranean high mountain

Proformica longiseta, an ant species endemic to certain high mountains, has been studied with regard to its tendency to nest underneath rocks. This behaviour led us to investigate whether a particular type of rock is selected, and, if so, the advantages to this species of the selection. This study was located at 2400 m above sea-level in the Sierra Nevada mountains (Granada, Spain). To determine the range of rock sizes available, in eight control plots the thicknesses were recorded and also the maximum and minimum diameters of all rocks with surface area of more than 6 cm². A total of 1724 rocks were recorded, noting among the rock types available those that were used for nesting. Also as a preliminary estimate of the thermal characteristics of the rocks, we recorded the temperatures of the air, soil surface, soil under a rock covering an ant nest, and soil at 30 cm depth. The results indicate thatP. longiseta selects flat rocks with a surface area/thickness ratio of 2–5, the thickness being not less than 1.5 cm, the surface area being 50–250 cm² and volume less than 1000 cm³. This type of rock offers the nests two beneficial but apparently contradictory effects: (1) protection against high temperatures on hot days, and (2) warmth on colder days by absorbing the diffusing solar heat more effectively than the air or soil around the nest.     

Restored oyster reefs and living shorelines can augment predator trophic dynamics

Coastal habitat loss has led to declines in many higher trophic level predators. These declines can be mitigated through habitat restoration, which putatively enhances predator populations and trophic dynamics by creating foraging opportunities in reestablished habitat, but this lacks empirical support. Here, we assess the prediction restored coastal habitat supports sportfish feeding relationships similar to natural habitat, at restored oyster reefs (Crassostrea virginica) and living shoreline habitats in Florida, U.S.A. Stable isotopes and gut contents were analyzed from young sportfish (i.e. predatory fish targeted by anglers) collected at control and restored sites for up to 3 years. The influence of habitat features, predator size, and prey availability on carbon and nitrogen isotope values were examined using a model species (mangrove/gray snapper [Lutjanus griseus]). In summary, sportfish species had distinct isotopic values, consuming similar prey but in different proportions between habitats. Prey abundance and richness, and reef height were influential predictors of L. griseus stable isotope values, with restored reefs contributing to their diet more than controls according to Bayesian mixing models. The trophic niche area of L. griseus and their predominant prey achieved trophic equivalence between restored and natural oyster reefs within 1 year following restoration. Stabilized living shorelines attained trophic equivalency to natural shorelines, but may take longer to accrue prey for some species. These findings generate fundamental ecological knowledge and actionable science, including targets, timelines, and indicator species, that natural resource managers and restoration practitioners can use to assess trophic structure and success of coastal habitat restoration.     

Invasive species cause large-scale loss of native California oyster habitat by disrupting trophic cascades

Although invasive species often resemble their native counterparts, differences in their foraging and anti-predator strategies may disrupt native food webs. In a California estuary, we showed that regions dominated by native crabs and native whelks have low mortality of native oysters (the basal prey), while regions dominated by invasive crabs and invasive whelks have high oyster mortality and are consequently losing a biologically diverse habitat. Using field experiments, we demonstrated that the invasive whelk’s distribution is causally related to a large-scale pattern of oyster mortality. To determine whether predator–prey interactions between crabs (top predators) and whelks (intermediate consumers) indirectly control the pattern of oyster mortality, we manipulated the presence and invasion status of the intermediate and top trophic levels in laboratory mesocosms. Our results show that native crabs indirectly maintain a portion of the estuary’s oyster habitat by both consuming native whelks (density-mediated trophic cascade) and altering their foraging behavior (trait-mediated trophic cascade). In contrast, invasive whelks are naive to crab predators and fail to avoid them, thereby inhibiting trait-mediated cascades and their invasion into areas with native crabs. Similarly, when native crabs are replaced with invasive crabs, the naive foraging strategy and smaller size of invasive crabs prevents them from efficiently consuming adult whelks, thereby inhibiting strong density-mediated cascades. Thus, while trophic cascades allow native crabs, whelks, and oysters to locally co-exist, the replacement of native crabs and whelks by functionally similar invasive species results in severe depletion of native oysters. As coastal systems become increasingly invaded, the mismatch of evolutionarily based strategies among predators and prey may lead to further losses of critical habitat that support marine biodiversity and ecosystem function. Electronic supplementary material  The online version of this article (doi:) contains supplementary material, which is available to authorized users.     

Estimating historical commercial rock lobster (Jasus edwardsii) catch inside Australian State territorial waters for marine protected area assessment: the binomial likelihood method

The rock lobster (Jasus edwardsii) fishery of South Australia is the State’s most valuable fisheries resource with an export value exceeding ~AU$100 million. The fishery operates primarily inshore (<60 m), and overlaps with a series of marine protected areas (MPAs) currently proposed for State territorial waters. As a result, the need to quantify the impact of proposed MPAs on commercial landings of rock lobster within territorial waters is an integral part of the MPA assessment process. Removing fishing effort displaced by MPAs prevents a corresponding increase in exploitation outside protected zones. We describe a binomial likelihood method that utilises historical commercial catch data to estimate catch totals of rock lobster inside South Australian State waters. Lobster catches per km² showed a high level of spatial variation with estimated historical lobster catch in State waters spanning approximately three orders of magnitude. The method identified key areas where high lobster catch (up to 500 kg/km²) overlapped with State waters. Binomial likelihood outputs have particular application to the estimation of net catch loss in situations where fishery buy-back or financial compensation are a considered option as part of the MPA implementation process.     

Rock-degrading endophytic bacteria in cacti

A plant–bacterium association of the cardon cactus (Pachycereus pringlei) and endophytic bacteria promotes establishment of seedlings and growth on igneous rocks without soil. These bacteria weather several rock types and minerals, unbind significant amounts of useful minerals for plants from the rocks, fix in vitro N₂, produce volatile and non-volatile organic acids, and reduce rock particle size to form mineral soil. This study revealed the presence of large populations of culturable endophytic bacteria inside the seeds extracted from wild plants, from seeds extracted from the guano of bats feeding on cactus fruit, in seedlings growing from these seeds, in the pulp of fruit, and in small, mature wild plants, and are comparable in size to populations of endophytic populations in some agricultural crops. The dominant culturable endophytes were isolates of the genera Bacillus spp., Klebsiella spp., Staphylococcus spp., and Pseudomonas spp. Based on partial sequencing of the 16s rRNA gene, the isolated strains had low similarity to known strains in these genera. However, these strains have higher molecular similarity among endophytes obtained from seeds, endophytes from roots, and some bacterial strains from the rhizoplane. Seedlings developed from seeds with endophytes contain the similar species of endophytes in their shoots, possibly derived from the seeds. This study shows the involvement of endophytic bacteria in rock weathering by cacti in a hot, subtropical desert and their possible contribution to primary colonization of barren rock. This study proposes that cacti capable of acquiring diverse populations of endophytes may give them an evolutionary advantage to gain a foothold on highly uncompromising terrain.     

The effect of ocean acidification and temperature on the fertilization and embryonic development of the Sydney rock oyster Saccostrea glomerata (Gould 1850)

This study investigated the synergistic effects of ocean acidification (caused by elevations in the partial pressure of carbon dioxide pCO₂) and temperature on the fertilization and embryonic development of the economically and ecologically important Sydney rock oyster, Saccostrea glomerata (Gould 1850). As pCO₂ increased, fertilization significantly decreased. The temperature of 26 °C was the optimum temperature for fertilization, as temperature increased and decreased from this optimum, fertilization decreased. There was also an effect of pCO₂ and temperature on embryonic development. Generally as pCO₂ increased, the percentage and size of D‐veligers decreased and the percentage of D‐veligers that were abnormal increased. The optimum temperature was 26 °C and embryonic development decreased at temperatures that were above and below this temperature. Abnormality of D‐veligers was greatest at 1000 ppm and 18 and 30 °C (≥90%) and least at 375 ppm and 26 °C (≤4%). Finally prolonged exposure of elevated pCO₂ and temperature across early developmental stages led to fewer D‐veligers, more abnormality and smaller sizes in elevated CO₂ environments and may lead to lethal effects at suboptimal temperatures. Embryos that were exposed to the pCO₂ and temperature treatments for fertilization and embryonic development had fewer D‐veligers, greater percentage of abnormality and reduced size than embryos that were exposed to the treatments for embryonic development only. Further at the elevated temperature of 30 °C and 750–1000 ppm, there was no embryonic development. The results of this study suggest that predicted changes in ocean acidification and temperature over the next century may have severe implications for the distribution and abundance of S. glomerata as well as possible implications for the reproduction and development of other marine invertebrates.     

The structure-function relationship of MSI7, a matrix protein from pearl oyster Pinctada fucata

We previously identified a matrix protein, MSI7, from pearl oyster Pinctada fucata. According to the structural analysis, the DGD site in the N-terminal of MSI7 is crucial for its role in the shell formation. In this study, we expressed a series of recombinant MSI7 proteins, including the wild-type and several mutants directed at the DGD site, using an Escherichia coli expression system to reveal the structure-function relationship of MSI7. Furthermore, in vitro crystallization, crystallization speed assay, and circular dichroism spectrometry were carried out. Results indicated that wild-type MSI7 could induce the nucleation of aragonite and inhibit the crystallization of calcite. However, none of the mutants could induce the nucleation of aragonite, but all of them could inhibit the crystallization of calcite to some extent. And all the proteins accelerated the crystallization process. Taken together, the results indicated that MSI7 could contribute to aragonite crystallization by inducing the nucleation of aragonite and inhibiting the crystallization of calcite, which agrees with our prediction about its role in the nacreous layer formation of the shell. The DGD site was critical for the induction of the nucleation of aragonite.