Lysis of mycelium ofFusarium oxysporum f. sp.udum in soil amended with organic matters

Summary Autoclaved or natural field soil amended with 0.1 to 5.0 per cent (W/W) of margosa cake, rice husk and sawdust with or without supplemental nitrogen were tested for lytic activity and bacterial numbers. Generally, non-amended autoclaved soil caused little or no lysis of mycelium ofF. oxysporum f. sp.udum; non-amended natural soil caused more lysis. Amendment of soil with margosa cake, rice husk or saw-dust with or without supplemental nitrogen greatly enhanced its lytic effect on the fungus. The degree of lysis depended on the dosage of amendment used and the stage of its decomposition in the soil. The extent of lysis increased as the bacterial population increased. Amongst bacteria,Bacillus subtilis was very common in most lytic zones.     

Zinc deficiency in wetland rice along a toposequence of hydromorphic soils in the Philippines

Summary Zinc deficiency in rice induced by prolonged water saturation of the soil is widespread in the Philippines. The poor drainage associated with the disorder is mostly due to upwelling of shallow artesian water in footslope areas and to ponding of water from continually flowing artesian wells common in such areas. One toposequence where no Zn deficiency occurred in the highest field and progressively severe Zn deficiency in successive lower fields, was studied in detail. With lower elevation soils showed an increase in organic matter and free carbonate, associated with increased upwelling and ponding of artesian water very high in dissolved Mg and Ca bicarbonate.     

Absorption of gamma-emitting fission products and activation products by rice under flooded and unflooded conditions from two tropical soils

Summary The absorption of gamma-emitting fission products¹⁰⁶Ru,¹²⁵Sb,¹³⁷Cs and¹⁴⁴Ce and activation products⁵⁹Fe,⁵⁸Co.⁵⁴Mn and⁶⁵Zn by rice plants grown on two contrasting tropical soils, namely, a blak soil (pellustert) and a laterite (oxisol), and the effects of flooding were studied under controlled conditions. Results indicated greater uptake of¹⁰⁶Ru and¹²⁵Sb from the black soil than from the laterite. In contrast, the uptake of¹⁴⁴Ce and¹³⁷Cs was greater in the laterite than in the black soil. Flooding treatment enhanced the uptake of all these fission products by rice plants in the laterite soil whereas this effect was observed only for¹²⁵Sb and¹³⁷Cs in the black soil.The plant uptake of activation products from the two soil types showed maximum accumulation of⁶⁵Zn followed by⁵⁴Mn,⁵⁹Fe and⁵⁸Co in both soil types. Besides, uptake of these nuclides was greater from the laterite soil than from the black soil. Flooding treatment for rice while showing a reduction of⁵⁹Fe uptake, showed an increase in plant uptake of⁵⁸Co,⁵⁴Mn and⁶⁵Zn in both soil types.     

Effect of heating on properties of some soils from Southern Nigeria and growth of rice

Summary The effect of heating on the properties of Apomu (Psammentic Usthorthent), Egbeda (Oxic Paleustalf) and Gambari (Typic Plinthustalf) surface soils were studied under laboratory conditions. Heating at low temperatures (100°C) have no detrimental effects on soil properties, on the contrary it increased the soil extractable P, Mg, Fe, Mn and Zn levels. Pronounced reductions in total N, Org. C, Org. P and extractable Ca and Mg levels and marked increases in extractable P, Zn, Mn and Fe were observed by heating to 200°C. Heating to 500° had an adverse effect on soil chemical and physical properties.Plant height and dry matter yeild of rice plants were higher when grown on Egbeda soil previously heated to 100°C. With addition of N, P and K there was no observed beneficial effect of the heating treatment. Rice plants grown on Egbeda soil previously heated to 200°C showed high uptake of Mn. Plants grew badly in soil previously heated to 500°C.     

Control of membrane morphogenesis in bacteriophage PM2

The regulation of membrane formation in bacteriophage PM2 serves as a simple model for changes in membrane structure in eukaryotic cells. Prior to Pseudomonas host lysis, wild-type virions mature to an icosahedral morphology at the inner face of the cytoplasmic membrane. The proliminary charcterization of two temperature-sensitive mutants of PM2 is described. In cells infected at the restrictive temperature with ts 1, an abundance of “empty” virus-size membrane vesicles are seen. Synthesis of DNA is also reduced in ts 1 infected cells. The preponderance of vesicles is not sen in cells infected with wil-type virus or with ts 1 at the permissive temperature. The “empty” appearance of the viral membranes suggests that viral DNA is not encapsulated. The major viral capsid protein (MW 26,000) is located just out side the viral membrane and normallyl sediments with host and virus membranes; insted, large amounts of capsid protein can be precipitated from the supernatant with TCA. Compared to cells infected with wild type virus, cells infected with is 5 at th restrictive temperature produce inside the cell an aboundance of virus-soze membrane vesicles. Taken Together, These results with viral mutants suggest that formation of a viral membrane of the proper size does not require a DNA core around which to form, or an outer scaffolding of coat protein against which to form a spherical bilayer.     

Light and electron microscopical study of Nosema eurytremae

A nuclear-polyhedrosis virus (NPV) of the silkworm, Bombyx mori, which forms an icosahedral inclusion body, was transmitted to larvae of the rice stem borer, Chilo suppressalis. Serial passages of Bombyx NPV in the alternate host by injecting the supernatant of diseased hemolymph produced inclusion bodies with cuboidal and other shapes that differed from the original shape formed in Bombyx. These different shapes increased with times of passages, and after the twelfth passage, only cuboidal inclusion bodies were formed. The icosahedral inclusion bodies in B. mori and the cuboidal inclusion bodies in C. suppressalis occluded singly enveloped virions of the same size (350 × 75 nm), but the cuboidal inclusion bodies contained only a few virions and a large number of membraneous spherical structures. The formation process of the cuboidal inclusion body differed from that of the icosahedral. At first, irregularly branched inclusion bodies containing “vacant” spaces appeared in the infected nuclei. The bodies grew larger with the deposition of protein in the spaces between the branches, and this was accompanied with the occlusion of a large number of membraneous structures formed in the vicinity of the inclusion bodies, which became cuboidal in shape.     

Mapping QTL for production traits in segregating Piétrain pig populations using genome‐wide association study results of F2 crosses

In this study, genome‐wide association study (GWAS) results of porcine F2 crosses were used to map QTL in outcross Piétrain populations. For this purpose, two F2 crosses (Piétrain × Meishan, n = 304; Piétrain × Wild Boar, n = 291) were genotyped with the PorcineSNP60v2 BeadChip and phenotyped for the dressing yield, carcass length, daily gain and drip loss traits. GWASs were conducted in the pooled F2 cross applying single marker mixed linear models. For the investigated traits, between two and five (in total 15) QTL core regions, spanning 250 segregating SNPs around a significant trait‐associated peak SNP, were identified. The SNPs within the QTL core regions were subsequently tested for trait association in two outcross Piétrain populations consisting of 771 progeny‐tested boars and 210 sows with their own performance records. In the sow (boar) dataset, five (eight) of the 15 mapped QTL were validated. Hence, many QTL mapped in the F2 crosses (with Piétrain as a common founder breed) are still segregating in the current Piétrain breed. This confirms the usefulness of existing F2 crosses for mapping QTL that are still segregating in the recent founder breed generation. The approach utilizes the high power of an F2 cross to map QTL in a breeding population for which it is not guaranteed that they would be found using a GWAS in this population.     

Splicing and alternative splicing in rice and humans

Rice is a monocot gramineous crop, and one of the most important staple foods. Rice is considered a model species for most gramineous crops. Extensive research on rice has provided critical guidance for other crops, such as maize and wheat. In recent years, climate change and exacerbated soil degradation have resulted in a variety of abiotic stresses, such as greenhouse effects, lower temperatures, drought, floods, soil salinization and heavy metal pollution. As such, there is an extremely high demand for additional research, in order to address these negative factors. Studies have shown that the alternative splicing of many genes in rice is affected by stress conditions, suggesting that manipulation of the alternative splicing of specific genes may be an effective approach for rice to adapt to abiotic stress. With the advancement of microarrays, and more recently, next generation sequencing technology, several studies have shown that more than half of the genes in the rice genome undergo alternative splicing. This mini-review summarizes the latest progress in the research of splicing and alternative splicing in rice, compared to splicing in humans. Furthermore, we discuss how additional studies may change the landscape of investigation of rice functional genomics and genetically improved rice. [BMB Reports 2013; 46(9): 439-447]     

不同海拔地区种植的水稻次库碳水化合物含量的比较

在品种、土壤、底肥和追肥等一致的情况下,对三个不同海拔地区种植的水稻的次库(茎+叶鞘)中碳水化合物含量作了比较,结果表明:齐穗和黄熟期次库中总糖或淀粉含量均随海拔增高而增加。但在黄熟期,高海拔地区次库的总糖或淀粉含量比齐穗期的增加,而低海拔地区次库的总糖或淀粉含量则比齐穗期的降低。 齐穗期时,次库的淀粉含量随施用的氮素肥量的增加而降低。在黄熟期,温凉稻作区水稻次库的淀粉含量均随氮素底肥施用量的增加而增加,低熟地区水稻次库的淀粉含量则趋于一致,不过不同地区相比各处理次库的淀粉含量均因海拔增高而增加。 不同时期的氮素追肥使齐穗期次库淀粉含量因追肥时间推迟而增加,唯元江晚穗肥处理的低于中穗肥处理的。黄熟期因追肥时间提早而次库的淀粉含量增加,但元江以早穗肥处理的次库淀粉含量最低。与齐穗期相比时,低海拔地区的各个处理,其次库的淀粉含量均减低,但高海拔的昆明温凉稻作区,施早和中穗肥的水稻,在黄熟期次库的淀粉含量反而增高。还可以看出水稻种植地海拔越高,其次库淀粉含量对追肥时间越敏感。 基于水稻次库中淀粉含量对氮素肥料的反应,就三地气候条件讨论了上述的差异。