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71.
利用70个朱顶红品种对12个数量性状进行了筛选及分级研究,并对5个数量性状的测量部位进行了研究。结果表明:所有性状均满足DUS测试要求,性状2由于区分能力弱不适于作为DUS测试性状。12个数量性状可进行3~9个连续分布的分级。花茎从下往上逐渐变细,但不同品种变细程度略有差异,在测量花茎中部的最大宽度时要求严格测量花茎的1/2处;不同茎上各数量性状测量值略有差异,除花茎长度和花梗长度外的性状差异不显著;同一花茎不同花间数量性状差异较小;同品种的花外花被片长度、宽度不存在显著差异;种球大小对数量性状有显著影响。 相似文献
72.
两种锦鸡和环颈雉线粒体DNA(mtDNA)的比较研究 总被引:12,自引:3,他引:12
本文以10种限制性内切酶分析雉科中环颈雉,红腹锦鸡和白腹锦鸡线粒体DNA(mtDNA)。雉属与锦鸡属之间的遗传距离P为0.076(0.067-0.085),红腹锦鸡与白腹锦鸡的P为0.012。推算雉属和锦鸡属的分化大约发生在3.8×10[6]年以前,红腹锦鸡与白腹锦鸡的分化大约在6×10[5]年以前。这些结果表明:1.在雉科系统发生中,雉属与锦鸡属是近缘的属;2.红腹锦鸡和白腹锦鸡的分化较晚,关系密切,可能只是两个亚种。 相似文献
73.
Mutual information and entropy transfer analysis employed on two inactive states of human beta-2 adrenergic receptor (β2-AR) unraveled distinct communication pathways. Previously, a so-called “highly” inactive state of the receptor was observed during 1.5 microsecond long molecular dynamics simulation where the largest intracellular loop (ICL3) was swiftly packed onto the G-protein binding cavity, becoming entirely inaccessible. Mutual information quantifying the degree of correspondence between backbone-Cα fluctuations was mostly shared between intra- and extra-cellular loop regions in the original inactive state, but shifted to entirely different regions in this latest inactive state. Interestingly, the largest amount of mutual information was always shared among the mobile regions. Irrespective of the conformational state, polar residues always contributed more to mutual information than hydrophobic residues, and also the number of polar-polar residue pairs shared the highest degree of mutual information compared to those incorporating hydrophobic residues. Entropy transfer, quantifying the correspondence between backbone-Cα fluctuations at different timesteps, revealed a distinctive pathway directed from the extracellular site toward intracellular portions in this recently exposed inactive state for which the direction of information flow was the reverse of that observed in the original inactive state where the mobile ICL3 and its intracellular surroundings drove the future fluctuations of extracellular regions. 相似文献
74.
采用文献考证法、田野调查法与逻辑演绎法,以元明清社会环境为视角,分析弋阳叠山书院园林变迁及其动力。自元代至清代,从变迁形式来看,书院园林选址从郊野山林迁入为城市高胜地,布局从单轴线前祀后学的建筑空间形态发展成双轴多进深多院落的园林空间形态,园林文化从以儒学文化为主转变为儒道释俗文化共存。从变迁动力来看,政治环境和经济支持是书院园林建设发展的基础,政体态度决定了书院园林存亡及其社会意义,经济支持在书院维系和官学化方面具有显著影响力,文化环境受政治环境影响,包容的政治环境允许延续宋儒品格,严苛的政治环境禁锢自由文风,因此文化环境对书院园林的选址、空间布局与文化确立起到关键作用力。 相似文献
75.
Tendulkar AV Wangikar PP Sohoni MA Samant VV Mone CY 《Journal of molecular biology》2003,334(1):157-172
We present a scheme for the classification of 3487 non-redundant protein structures into 1207 non-hierarchical clusters by using recurring structural patterns of three to six amino acids as keys of classification. This results in several signature patterns, which seem to decide membership of a protein in a functional category. The patterns provide clues to the key residues involved in functional sites as well as in protein-protein interaction. The discovered patterns include a "glutamate double bridge" of superoxide dismutase, the functional interface of the serine protease and inhibitor, interface of homo/hetero dimers, and functional sites of several enzyme families. We use geometric invariants to decide superimposability of structural patterns. This allows the parameterization of patterns and discovery of recurring patterns via clustering. The geometric invariant-based approach eliminates the computationally explosive step of pair-wise comparison of structures. The results provide a vast resource for the biologists for experimental validation of the proposed functional sites, and for the design of synthetic enzymes, inhibitors and drugs. 相似文献
76.
Molecular dynamics simulations were performed on both apo and copper forms of the human copper chaperone, Hah1. Wild-type Hah1 and a methionine (M10) to serine mutant were investigated. We have evidenced the central role of residue M10 in stabilizing the hydrophobic core of Hah1 as well as the internal structure of the metal-binding site. When copper(I) is bound, the mobility of Hah1 is reduced whereas mutation of M10 implies a drastic increase of the mobility of apoHah1, stressing the importance of this highly conserved hydrophobic residue for copper sequestration by the apoprotein. 相似文献
77.
人脑和人血清胆碱酯酶三维结构的计算机模拟研究 总被引:4,自引:0,他引:4
本文以同源的电鳐胆碱酯酶(T.AChE)的三维结构为模板,模拟预测了人脑和血清胆碱酯酶(H。AChE和H.BuChE)的三维结构和活力中心的组成。指T.AChE,H.AChE和H.BuChE宁间结构差异,并讨论了ACh和H。AChE的对接(docking)。H。AChE和H.BuChE三维结构的确定将为进一步深入研究它的中毒机理和合理药物设计提供靶子。 相似文献
78.
Dale Fredericks Robert Clay Tracy Warner Anne O'Connor David M. de Kretser Milton T. W. Hearn 《Biotechnology progress》2010,26(2):372-383
We report a new procedure to express recombinant human activin A using the methanolic yeast, Pichia pastoris. Optimization of culture procedures has involved comprehensive examination of the effects of culture vessel shape, volume of broth in the induction and expression cultures, methanol concentration, culturing temperature, and pH of the expression cultures. After this optimization, as well as modification of the native cleavage sites, a laboratory scale procedure has been established which routinely produced 2–10 mg/L amounts of this vital growth factor in the highly efficient, eukaryotic yeast system. This system avoids the need to produce this protein and similar TGF‐β proteins in mammalian cell lines which, in addition to being costly, produce many native binding partners of these cystine knot proteins, a factor which can dramatically affect yields of the target protein. © 2010 American Institute of Chemical Engineers Biotechnol. Prog., 2010 相似文献
79.
Kristine G. Kirkensgaard Per Hägglund Azar Shahpiri Christine Finnie Anette Henriksen Birte Svensson 《Proteins》2014,82(4):607-619
The ubiquitous disulfide reductase thioredoxin (Trx) regulates several important biological processes such as seed germination in plants. Oxidized cytosolic Trx is regenerated by nicotinamide adenine dinucleotide phosphate (NADPH)‐dependent thioredoxin reductase (NTR) in a multistep transfer of reducing equivalents from NADPH to Trx via a tightly NTR‐bound flavin. Here, interactions between NTR and Trx are predicted by molecular modelling of the barley NTR:Trx complex (HvNTR2:HvTrxh2) and probed by site directed mutagenesis. Enzyme kinetics analysis reveals mutants in a loop of the flavin adenine dinucleotide (FAD)‐binding domain of HvNTR2 to strongly affect the interaction with Trx. In particular, Trp42 and Met43 play key roles for recognition of the endogenous HvTrxh2. Trx from Arabidopsis thaliana is also efficiently recycled by HvNTR2 but turnover in this case appears to be less dependent on these two residues, suggesting a distinct mode for NTR:Trx recognition. Comparison between the HvNTR2:HvTrxh2 model and the crystal structure of the Escherichia coli NTR:Trx complex reveals major differences in interactions involving the FAD‐ and NADPH‐binding domains as supported by our experiments. Overall, the findings suggest that NTR:Trx interactions in different biological systems are fine‐tuned by multiple intermolecular contacts. Proteins 2014; 82:607–619. © 2013 Wiley Periodicals, Inc. 相似文献
80.
Jui-Hung Tai Hsiao-Yu Sun Yi-Cheng Tseng Guanghao Li Sui-Yuan Chang Shiou-Hwei Yeh Pei-Jer Chen Shu-Miaw Chaw Hurng-Yi Wang 《Molecular biology and evolution》2022,39(9)
One of the unique features of SARS-CoV-2 is its apparent neutral evolution during the early pandemic (before February 2020). This contrasts with the preceding SARS-CoV epidemics, where viruses evolved adaptively. SARS-CoV-2 may exhibit a unique or adaptive feature which deviates from other coronaviruses. Alternatively, the virus may have been cryptically circulating in humans for a sufficient time to have acquired adaptive changes before the onset of the current pandemic. To test the scenarios above, we analyzed the SARS-CoV-2 sequences from minks (Neovision vision) and parental humans. In the early phase of the mink epidemic (April to May 2020), nonsynonymous to synonymous mutation ratio per site in the spike protein is 2.93, indicating a selection process favoring adaptive amino acid changes. Mutations in the spike protein were concentrated within its receptor-binding domain and receptor-binding motif. An excess of high-frequency derived variants produced by genetic hitchhiking was found during the middle (June to July 2020) and late phase I (August to September 2020) of the mink epidemic. In contrast, the site frequency spectra of early SARS-CoV-2 in humans only show an excess of low-frequency mutations, consistent with the recent outbreak of the virus. Strong positive selection in the mink SARS-CoV-2 implies that the virus may not be preadapted to a wide range of hosts and illustrates how a virus evolves to establish a continuous infection in a new host. Therefore, the lack of positive selection signal during the early pandemic in humans deserves further investigation. 相似文献