Fixed Versus Removable Microdialysis Probes for In Vivo Neurochemical Analysis: Implications for Behavioral Studies

Abstract: The levels of several neurochemicals, i.e., uric acid (UA), dopamine (DA), dihydroxyphenylacetic acid, and 5-hydroxyindoleacetic acid, collected daily from the rat striatum with either fixed or removable microdialysis probes for 7 days after surgery were compared. The implantation of the fixed cannula was followed by a 10-fold increase in the UA content in the dialysates collected from the first day after surgery onward and by a steady decrease in dihydroxyphenylacetic acid levels, whereas those of DA remained fairly stable. With the removable cannula system, only a smaller, transient increase in UA during the first 3 days after surgery was observed, with no change in DA or monoamine metabolites. The glial reaction around the cannula tracks was assessed by both quantitative histological techniques and measuring the glutamine levels in the dialysates collected at the time of surgery and 7 days later. Both the glial cell number and nuclear size, as well as the glutamine outflow, were considerably larger in the animals implanted with the fixed probes. It is, therefore, likely that the UA levels in the dialysate reflect the glial reaction to the probe. The suitability of the removable probe system for behavioral experiments involving repeated microdialysis sampling was illustrated in an experiment showing that the DA release in the nucleus accumbens of male rats assessed daily at postsurgery days 5–10 was virtually identical in three alternating sessions of sexual behavior as was the smaller release of this neurotransmitter detected during intervening nonsexual social interactions.     

Long lasting effects of audiogenic seizures on synaptosomal neurotransmitter amino acids in Rb mice

Long lasting alterations of synaptosomal amino acid neurotransmitters following a single or several audiogenic seizures and/or acoustic stimulations were investigated in six brain areas-olfactory bulbs (OB), amygdala (A), hippocampus (Hi), cerebellum (C), inferior colliculus (IC), ponsmedulla (P)- of three sublines of Rb mice: audiogenic seizure-prone Rb1 and Rb2, seizure-resistant Rb3. Changes in the synaptosomal levels of aspartate (Asp), glutamate (Glu), taurine (Tau), 4-amino butyrate (GABA), glycine (Gly) and some closely related precursors, serine (Ser) and glutamine (Gln), were recorded 15–18 hours after a single or multiple acoustic stimulations. Changes were more frequent, or larger, after polystimulation. Some alterations appeared to be attributable to an effect of the acoustic stress.In both seizure-prone sublines, after a single or repeated seizures, an increase in synaptosomal Asp was observed in IC. Decreases in Asp and Tau in OB and Ser in A, an increase in Gln in IC were only observed after repeated seizures, in Rb1 and Rb2 mice.Abbreviations used GABA 4-aminobutyrate - Tau taurine - Gly glycine - Ser serine - Asp aspartate - Glu glutamate - Gln glutamine - OB olfactory bulbs - A amygdala - Hi hippocampus - C cerebellum - IC interior colliculus - P pons Professeur Paul Mandel passed away on 6th October, 1992Special issue dedicated to Dr. Bernard W. Agranoff.     

Repeat sequence interspersion in coding DNA of peas does not reflect that in total pea DNA

The pattern of sequence organization in the regions of the pea genome near sequences coding for mRNA differs significantly from that in total DNA. Interspersion of repeated and single copy sequences is so extensive that 85% of 1300 nucleotide-long fragments contain highly repetitive sequences (about 5000 copies per haploid genome). However, data presented here demonstrate that sequences which code for mRNA are enriched in the small fraction of fragments which do not contain these highly repetitive sequences. Thus, in contrast to the great majority of other sequences in the genome, most mRNA coding sequences are not located within 1300 nucleotides of highly repetitive elements. Moreover, our data indicate that those repeats (if any) which are closely associated with mRNA coding sequences belong to low copy number families characterized by an unusually low degree of sequence divergence.Abbreviations NT nucleotides - NTP nucleotide pairs - C_ot the product of molar concentration of DNA nucleotides and time of incubation (mol s/L) - T_m the temperature at which half of the nucleotides are unpaired - T_m,i the temperature at which half of the complementary strands are completely separated - PIPES 1, 4, Piperazinediethane sulfonic acid - PB an equimolar mixture of NaH₂PO₄ and Na₂HPO₄ (pH 6.8).     

The Link between Dynamics and Statistics in Analysis of Repeated Measurements

A method of analysis of repeated measurements is proposed. When a drug is administered orally or by intramuscular injection, the concentration of the drug in the blood-time curve can often be modeled using a one-compartment model assuming first-order absorption in the field of pharmacokinetics. As to incorporation of individual variation, which is important statistically in modeling of repeated measurements, variations within an individual are taken into account in the model by a Wiener process and variations between individuals are expressed as differences in parameters. Accordingly, in this study, repeated measurements are modeled by a continuous time series statistically which was obtained from a one-compartment model assuming first-order absorption representing the dynamics affecting the data. The proposed model is not a random or mixed effect model but a fixed effect model; however, the covariance matrix includes values which differ between individuals. This is a new type of statistical modeling for repeated measurements, with flexibility, due to use of the link between statistics and dynamics. On the basis of the above, hypotheses of equality of treatment effects and equality of parameters between individuals are tested.     

Heteroscedastic Nonlinear Regression Models with Random Effects and Their Application to Enzyme Kinetic Data

We present a new modification of nonlinear regression models for repeated measures data with heteroscedastic error structures by combining the transform-both-sides and weighting model from Caroll and Ruppert (1988) with the nonlinear random effects model from Lindstrom and Bates (1990). The proposed parameter estimators are a combination of pseudo maximum likelihood estimators for the transform-both-sides and weighting model and maximum likelihood (ML) or restricted maximum likelihood (REML) estimators for linear mixed effects models. The new method is investigated by analyzing simulated enzyme kinetic data published by Jones (1993).     

Estimation and Multiple Comparisons When There Are Missing Values with an Application in Immunology

A method is suggested for handling multiple comparisons in repeated measurement situations with completely random missing values. Exact results are obtained for the situation with normally distributed observations in the case of compound symmetry. The method uses grouping with respect to the positions of the missing values. It is most efficient and best suited when there are not too many measurement occasions in the longitudinal investigation.     

Inter-Alu-like species-specific sequences in the Saccharum complex

Alu sequences constitute the most abundant family of short interspersed nuclear elements, SINEs, in the primate genome. The Alu-PCR method, which consists of amplification between Alu sequences, is usually applied in human genetics to provide polymorphic markers. Here we report the presence of Alu-like sequences in sugarcane and related species by applying the Alu-PCR-like method. Amplifications using a PCR primer defined in conserved regions of Alu human sequences lead to specific complex multiband profiles in all the Saccharum and related genera clones surveyed. The isolation and characterisation of the amplified genus-specific inter-Alu-like fragments allowed us to isolate repeated sequences that are specific for different genera of the Saccharum complex: MsCIR2 from Miscanthus, EaCIR6 and EaCIR7 from Erianthus, and SrCIR2 from Saccharum. Two PCR diagnostic tests were developed from the inter-Alu-like sequences MsCIR2 and EaCIR6, and proved efficient in identifying intergeneric hybrids Saccharum×Miscanthus or Saccharum×Erianthus, respectively. The present study illustrates how the Alu-PCR-like method could help investigating the origin of amphiploid species and monitoring introgression in plants. Received: 7 March 1999 / Accepted: 25 March 1999     

The complete nucleotide sequence and multipartite organization of the tobacco mitochondrial genome: comparative analysis of mitochondrial genomes in higher plants

Tobacco is a valuable model system for investigating the origin of mitochondrial DNA (mtDNA) in amphidiploid plants and studying the genetic interaction between mitochondria and chloroplasts in the various functions of the plant cell. As a first step, we have determined the complete mtDNA sequence of Nicotiana tabacum. The mtDNA of N. tabacum can be assumed to be a master circle (MC) of 430,597 bp. Sequence comparison of a large number of clones revealed that there are four classes of boundaries derived from homologous recombination, which leads to a multipartite organization with two MCs and six subgenomic circles. The mtDNA of N. tabacum contains 36 protein-coding genes, three ribosomal RNA genes and 21 tRNA genes. Among the first class, we identified the genes rps1 and rps14, which had previously been thought to be absent in tobacco mtDNA on the basis of Southern analysis. Tobacco mtDNA was compared with those of Arabidopsis thaliana, Beta vulgaris, Oryza sativa and Brassica napus. Since repeated sequences show no homology to each other among the five angiosperms, it can be supposed that these were independently acquired by each species during the evolution of angiosperms. The gene order and the sequences of intergenic spacers in mtDNA also differ widely among the five angiosperms, indicating multiple reorganizations of genome structure during the evolution of higher plants. Among the conserved genes, the same potential conserved nonanucleotide-motif-type promoter could only be postulated for rrn18-rrn5 in four of the dicotyledonous plants, suggesting that a coding sequence does not necessarily move with the promoter upon reorganization of the mitochondrial genome.Electronic Supplementary Material Supplementary material is available in the online version of this article at Communicated by R. Hagemann