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91.
Edward K Hall Gabriel A Singer Marvin P?lzl Ieda H?mmerle Christian Schwarz Holger Daims Frank Maixner Tom J Battin 《The ISME journal》2011,5(2):196-208
Stoichiometry of microbial biomass is a key determinant of nutrient recycling in a wide variety of ecosystems. However, little is known about the underlying causes of variance in microbial biomass stoichiometry. This is primarily because of technological constraints limiting the analysis of macromolecular composition to large quantities of microbial biomass. Here, we use Raman microspectroscopy (MS), to analyze the macromolecular composition of single cells of two species of bacteria grown on minimal media over a wide range of resource stoichiometry. We show that macromolecular composition, determined from a subset of identified peaks within the Raman spectra, was consistent with macromolecular composition determined using traditional analytical methods. In addition, macromolecular composition determined by Raman MS correlated with total biomass stoichiometry, indicating that analysis with Raman MS included a large proportion of a cell''s total macromolecular composition. Growth phase (logarithmic or stationary), resource stoichiometry and species identity each influenced each organism''s macromolecular composition and thus biomass stoichiometry. Interestingly, the least variable peaks in the Raman spectra were those responsible for differentiation between species, suggesting a phylogenetically specific cellular architecture. As Raman MS has been previously shown to be applicable to cells sampled directly from complex environments, our results suggest Raman MS is an extremely useful application for evaluating the biomass stoichiometry of environmental microorganisms. This includes the ability to partition microbial biomass into its constituent macromolecules and increase our understanding of how microorganisms in the environment respond to resource heterogeneity. 相似文献
92.
Radiomodulatory effect of liposome encapsulated AK-2123 on tumor in mice exposed to hepatocarcinogen 总被引:1,自引:0,他引:1
Alam A Rapthap CC Singha LI Sharan RN Singh V 《Molecular and cellular biochemistry》2005,271(1-2):139-150
An attempt was made to evaluate the whole body -radiation effect on tumor in the presence of free and liposome encapsulated AK-2123, a hypoxic cell radiosensitizer that has widely been used in combination with a number of cancer therapies such as thermotherapy, chemotherapy and radiotherapy. Entrapment efficiency of AK-2123 into liposome was determined by LASER Raman spectroscopy. Cancer induction in mice was carried out by repeated exposure of N-nitrosodiethylamine (DEN) in combination with partial hepatectomy. Parameters such as marker enzymes activities (GGT and AChE), rates of nucleic acid synthesis, viability modification factor and the histology of liver tissues monitored, supported the induction of cancer in liver. In addition, the effect of free as well as liposome encapsulated AK-2123 on haemopoietic parameters were also studied. It was observed that AK-2123 after incorporation into liposome afforded more efficient radiomodulatory effects than that of free AK-2123 as determined by the above-mentioned parameters. Neither free AK-2123 nor liposome encapsulated AK-2123 showed any detectable toxic effects on the mice. Thus, it is seen that treatment of cancer with a combination of radiation, a radiomodifier and a drug delivery system, opens a wide scope for exploitation for the improvement of existing cancer therapies. (Mol Cell Biochem 271: 139–150, 2005) 相似文献
93.
S.?E.?Jorge?Villar H.?G.?M.?EdwardsEmail author M.?R.?Worland 《Origins of life and evolution of the biosphere》2005,35(5):489-506
Raman spectra have been obtained for extremophiles from several geological environments; selected examples have been taken
from hot and cold deserts comprising psychrophiles, thermophiles and halophiles. The purpose of this study is the assessment
of the effect of the wavelength of the laser excitation on the ability to determine unique information from the Raman spectra
about the specificity of detection of biomolecules produced as a result of the survival strategies adopted by organisms in
extreme terrestrial environments. It was concluded that whereas FT-Raman spectroscopy at 1064 nm gave good quality results
the time required to record the data was relatively large compared with other wavelengths of excitation but that better access
to the CH stretching region for organic molecules was given. Shorter wavelength excitation of biomolecules in the blue-green
regions of the visible spectrum using a conventional dispersive spectrometer was more rapid but very dependent upon the type
of chemical compound being studied; most relevant biomolecules fluoresced at these wavelengths but carotenoids exhibited a
resonance effect which resulted in an improved detection capability. Minerals and geological materials, in contrast, were
best studied at these visible wavelengths. In general, the best compromise system for the excitation of the Raman spectra
of both geological and biological materials was provided using a 785 nm laser coupled with a dispersive spectrometer, especially
for accessing the 1800–200 cm−1 wavenumber shift region where much of the definitive analytical information resides. This work will have conclusions relevant
to the use of miniaturised Raman spectrometers for the detection of biomolecules in extraterrestrial planetary exploration. 相似文献
94.
Raudenkolb S Wartewig S Brezesinski G Funari SS Neubert RH 《Chemistry and physics of lipids》2005,136(1):13-22
The thermotropic properties of N-(alpha-hydroxyacyl)-sphingosine (CER[AS]) in dry and hydrated state were studied by means of X-ray powder diffraction and FT-Raman spectroscopy. The polymorphic states of the CER[AS]/water mixture (lamellar crystalline, lamellar hexagonal gel, liquid crystalline) depend on the thermal pre-treatment of the sample. Only by heating the CER[AS]/water mixture above the melting chain transition can the system be hydrated. At room temperature, both dry and hydrated states form lamellar structures, which differ in their repeat distance and packing of hydrocarbon chains. Above the melting chain transition, hydrated CER[AS] forms a liquid crystalline hexagonal phase, whereas anhydrous CER[AS] forms an isotropic liquid phase. The various phases of hydrated CER[AS] are distinguished on the basis of the corresponding Raman spectra. 相似文献
95.
Raman spectroscopic analysis of the effect of ultraviolet irradiation on calf thymus DNA 总被引:1,自引:1,他引:0
Raman spectroscopy was used for the first time to detect the effect of independent UVA (ultraviolet-A: 320-400nm) and UVB (ultraviolet-B: 280-320 nm) irradiation on the calf thymus DNA in aqueous solution. After both UVA and UVB irradiation for 1h or 3h, the damage to the conformation of DNA was moderate, but the reduction of the B-form DNA component was obvious. Both UVA and UVB caused significant damage to the deoxyribose moiety and bases, among which the pyrimidine base pairs were more seriously affected. There appeared to be preferential damaging sites on DNA molecules caused by UVA and UVB irradiation. UVA irradiation caused more damage to the deoxyribose than UVB irradiation, while UVB irradiation caused more significant damage to the pyrimidine moiety than UVA irradiation. After UVB irradiation for 3h, unstacking of the AT base pairs and the cytosine ring took place, severe damage to the thymine moiety occurred, and some base pairs were modified. Moreover, with either UVA or UVB irradiation for 3h,the photoreactivation of DNA occurred. The damage to the DNA caused by UVB was immediate, while the damage caused by UVA was proportional to the irradiation duration. The experimental results partly indicate the formation of some cyclobutane pyrimidine dimers and (6-4) photoproducts. 相似文献
96.
Essential oils are one of the most valuable natural products. The price of special essential oils that can be purchased on the market strongly depends on the quality of the product. The quality, which depends on the quantitative and qualitative variation of different monoterpenes, varies with respect of the origin and the harvesting period. This contribution reports on a Raman spectroscopic study on the essential oil occurring in fennel. Cross-sections of fennel seed were investigated by use of Raman spectroscopy and Raman mapping to localize the essential oil and to analyze its chemical composition directly in the plant. Furthermore the practicability of a home-built mobile transportable Raman spectrometer to perform on-site measurements was successfully tested. 相似文献
97.
In order to investigate the reduction mechanism of L-cysteine (Cys) on keratin fibers, cross-sectional samples of virgin white human hair treated with Cys were prepared. The heterogeneous reaction between Cys and keratin fibers involving the diffusion of Cys into human hair was analyzed at the molecular level using microspectrophotometry and Raman spectroscopy. The diffusion pattern of Cys into human hair showed non-Fickian type characteristics, thus indicating the free amino groups of electrostatically interacted with the anionic ions of the fiber surface. The disconnected relative concentration of -SS- groups at various depths of the hair samples with pH 9.0 was less than the Cys relative concentration, indicating that the reaction rate (the disconnection of -SS- groups) was slower than the diffusion rate of Cys into human hair. From these experiments, we concluded that the free amino groups of Cys electrostatically interacted with the anionic ions of the fiber surface, thereby decreasing the reaction rate (the disconnection of -SS- groups) of Cys at pH 9.0. 相似文献
98.
The conformational changes of 3,5,3′-triiodo L-thyronine induced by interaction with phospholipids were analyzed by Raman spectroscopy. The spectra were interpreted in
terms of two conformers of this hormone in equilibrium in the lipid medium, depending on the orientation of the 3′-iodine
with respect to the ring α. Theoretical geometry optimizations on both conformers in vacuo and in different solvents, together with the respective calculated energies support the experimental results. The presence
of only one iodine atom in the phenolic ring allows assumption of a higher flexibility of 3,5,3′-triiodo L-thyronine and a better accommodation into the lipid medium compared to 3,5,3′,5′-tetraiodo L-thyronine. The possible physiological implications of structural differences that appear in membrane models between 3,5,3′-triiodo
L-thyronine and 3,5,3′,5′-tetraiodo L-thyronine are discussed. 相似文献
99.
Oligosaccharide identification and mixture quantification using Raman spectroscopy and chemometric analysis 总被引:1,自引:0,他引:1
This work demonstrates the feasibility of using Raman spectroscopy for the analysis of small quantities of chemically similar oligosaccharides and their mixtures. Raman spectra were obtained from 10-microL aliquots of 1 mM solutions of maltotetraose and/or stachyose after deposition onto an electrochemically roughened silver substrate (and the resulting spectral features are attributed to a combination of normal and surface-enhanced Raman scattering). These compounds were selected because they are representative of glycans derived from post-translationally modified proteins which, like these compounds, often consist of isomers of equal mass and similar shape. Replicate spectral measurements were recorded and processed using a partial-least-squares (PLS) classification and quantification algorithms with a leave-one-batch-out (LOBO) training and testing procedure. Spectra derived from solutions of individual sugars were identified with 100% accuracy, and mixtures of the two sugars were quantified with an average error of 2.7% in the relative maltotetraose/stachyose composition for mixtures with a total oligosaccharide concentration of 1 mM. 相似文献
100.
Kyrikou I Hadjikakou SK Kovala-Demertzi D Viras K Mavromoustakos T 《Chemistry and physics of lipids》2004,132(2):157-169
The thermal effects of non-steroidal anti-inflammatory drugs (NSAIDs) meloxicam, tenoxicam, piroxicam and lornoxicam have been studied in dipalmitoylphosphatidylcholine (DPPC) membrane bilayers using neutral and acidic environments (pH 2.5). The strength of the perturbing effect of the drugs is summarized to a lowering of the main phase transition temperature and a broadening of the phase transition temperature as well as broadening or abolishment of the pretransition of DPPC bilayers. The thermal profiles in the two environments were very similar. Among the NSAIDs studied meloxicam showed the least perturbing effect. The differential scanning calorimetry results (DSC) in combination with molecular modeling studies point out that NSAIDs are characterized by amphoteric interactions and are extended between the polar and hydrophobic segments of lipid bilayers. The effects of NSAIDs in membrane bilayers were also investigated using Raman spectroscopy. Meloxicam showed a gauche:trans profile similar to DPPC bilayers while the other NSAIDs increased significantly the gauche:trans ratio. In conclusion, both techniques show that in spite of the close structural similarity of the NSAIDs studied, meloxicam appears to have the lowest membrane perturbing effects probably attributed to its highest lipophilicity. 相似文献