Transformation efficiencies and progeny analysis after varying different parameters of direct gene transfer of Nicotiana tabacum protoplasts

Nicotiana tabacum protoplasts were transformed by polyethylene glycol (PEG)-mediated uptake and electroporation, with circular and linear DNA, and with or without X-ray irradiation. We investigated the influence on the transient expression by these parameters as well as on the frequencies for stable transformation. Plants were regenerated and selfed, and the progenies of the transformed plants were analysed and used to compare the pattern of gene integration by these different variations in transformation methods. The results from the transient expression as judged by glucuronidase (GUS) activity, showed electroporation to give higher and more reproducible results than PEG-mediated uptake. Using linear instead of circular DNA increased the rate of stable transformation about 3 times. Including a mild X-ray treatment gave an increase in the same range. When the inheritance of the transferred trait was investigated, it was found that protoplasts transformed with linear DNA resulted in the highest number of plants with single-copy insertions. Protoplasts transformed with circular DNA showed the highest incidence of losing the trait, while plants in which the transformation included an X-ray treatment, had the highest frequency of multicopy insertion events.     

Algorithm independent properties of RNA secondary structure predictions

Algorithms predicting RNA secondary structures based on different folding criteria – minimum free energies (mfe), kinetic folding (kin), maximum matching (mm) – and different parameter sets are studied systematically. Two base pairing alphabets were used: the binary GC and the natural four-letter AUGC alphabet. Computed structures and free energies depend strongly on both the algorithm and the parameter set. Statistical properties, such as mean number of base pairs, mean numbers of stacks, mean loop sizes, etc., are much less sensitive to the choice of parameter set and even of algorithm. Some features of RNA secondary structures, such as structure correlation functions, shape space covering and neutral networks, seem to depend only on the base pairing logic (GC or AUGC alphabet). Received: 16 May 1996 / Accepted: 10 July 1996     

High-throughput RNA extraction from plant samples based on homogenisation by reciprocal shaking in the presence of a mixture of sand and glass beads

We describe here a reliable high-throughput method for extraction of RNA from fresh or frozen plant tissue that obviates laborious and time-consuming homogenisation by mortar and pestle. The method is based on homogenisation by high-speed reciprocal shaking in presence of a mixture of inexpensive abrasive materials; i.e., quartz sand and glass beads. After homogenisation, the method follows a standard procedure for RNA extraction by phenol/LiCl. Yield and quality of RNA obtained by homogenisation with the sand/glass bead mix are identical to those obtained by mortar and pestle.     

昆虫核酸分子系统学研究进展

本文从研究对象、方法、类群、内容等方面综述了近十年来昆虫核酸分子系统学研究进展概况。文中首先介绍了ＲＦＬＰＡ、探针杂交及ＤＮＡ指纹、ＰＣＲ与ＲＡＰＤ－ＰＣＲ、顺序分析方法及应用情况,列举了在双翅目、膜翅目、同翅目、直翅目等目昆虫中的研究进展,并从居群遗传结构、分类学研究、系统发育和分子进化４个方面总结了昆虫核酸分子系统学的研究内容和主要成果,最后指出ＲＡＰＤ－ＰＣＲ与ＲＦＬＰ联合用于测序是近期昆虫分子系统学上最有应用价值的方法。     

非洲紫罗兰叶片脱分化过程中核酸蛋白质和滨粉含量动态的研究

本文测定了非洲紫罗兰（Ｓａｉｎｔｐａｕｌｔａｉｏｎａｎｔｈａ）叶片脱分化过程中核酸、蛋白质和波粉的含量。结果表明：发生脱分化的叶片中的蛋白质和淀粉含量均低于对照,而ＲＮＡ含量则高于对照,ＤＮＡ含量无明显差异。叶片培养的第一天内,发生脱分化的叶片中的蛋白质含量明显下降,对照中的蛋白质含量上升。脱分化过程中,淀粉含量有一个上升、下降、再上升的变化过程,对照中淀粉含量一直上升。     

肾综合征出血热人体组织中病毒包涵体的性质及意义的进一步研究

应用免疫组化、原位分子杂交、电镜及免疫电镜等方法进一步对肾综合征出血热人体尸检组织中病毒包涵体（ＩＢ）的抗原、核酸性质和超微结构特点作了进一步观察。结果,在３９例中的２０例尸检病例组织中显示出病毒核蛋白抗原和血凝素抗抗原阳性的ＩＢ,其中包括１６例陕西尸检病例组织中的６例休克期和１例多尿期病例,１７例上海病例中的３例休克期和９例少尿期病例及３例江西病例中的１例休克期病例。ＩＢ主要分布在呼吸道和肺泡、肾远曲小管和集合管、胃肠道、腺垂体、扁桃体、胰腺、前列腺等组织的粘膜上皮和腺上皮细胞及肝细胞和睾丸生精上皮细胞胞浆中,阳性细胞形态基本正常。应用原位分子杂交,可在该组细胞小同时检测到病毒ＲＮＡ,多为胞浆内弥漫阳性,仅少数组织中显示出病毒ＲＮＡ阳性ＩＢ结构。电镜观察阳性组织细胞中出现由大量微丝微管及颗粒样结构组成的ＩＢ结构,其小的病毒颗粒状结构、内质网及纤维丝状结构呈病毒抗原阳性,上述结构位于高尔基体区。结果说明该病毒有感染上皮细胞的特性,对其宿主细胞的致细胞病变作用是极其温和的,且多表现在亚细胞水平。ＩＢ可能是病毒过量表达抗原的堆积或病毒复制部位,而微丝微管结构可能参与病毒的感染过程。     

条锈菌侵染初期小麦初生叶内可翻译mRNA的变化

小麦条锈菌毒性小种及其无毒性突变型侵染初期,是不亲和反应的小麦叶片内可翻译ｍＲＮＡ水平迅速增加,而呈亲和反应叶片的增加幅度小且滞后。同时前者的Ｐｏｌｙ（Ａ＋）－ＲＮＡ水平高于未接种对照,后者低于对照。３２Ｐ标记实验证实不亲和反应叶片Ｐｏｌｙ（Ａ＋）－ＲＮＡ的合成增加早于亲和反应叶片。Ｐｏｌｙ（Ａ＋）－ＲＮＡ体外翻译产物经ＳＤＳ－ＰＡＧＥ分离后,放射自显影图谱显示一些多肽条带的３５Ｓ－Ｍｅｔ相对掺入量有定量差异。     

Statistics of RNA melting kinetics

We present and study the behavior of a simple kinetic model for the melting of RNA secondary structures, given that those structures are known. The model is then used as a map that. assigns structure dependent overall rate constants of melting (or refolding) to a sequence. This induces a landscape of reaction rates, or activation energies, over the space of sequences with fixed length. We study the distribution and the correlation structure of these activation energies. Correspondence to: P. Schuster