几株红假单胞菌属细菌的表观特征及其遗传多样性研究

采用变性梯度胶电泳(DGGE)分析方法和传统的表型特征研究方法、化学方法、核酸杂交方法等技术对14株紫色非硫细菌进行了多相研究。它们均具有红假单胞菌属(Rhodopseudomonas)的基本特征：具片层状光合内膜结构,出芽分裂,含细菌叶绿素α和正常的螺菌黄素等。根据形态大小、黑暗条件下能否形成好氧菌落及碳源利用上的差异可将14株菌分为T群和gc群两群。用一对引物341f～906r扩增3株标准菌株Rps.palustris ATCC 17001、Rps.rutila R1、Rps.julia ATCC 51105和14株分离株的16S rRNA基因片断,作DGGE分析,结果发现,17株菌中有5个遗传型：gc型、R1型、T型、pal型、jul型。3个标准菌株分别是R1型、pal型、jul型,而14株分离菌株除包括R1型外,另有2个新的遗传型：T型和gc型。几个代表菌株的总DNA的杂交结果表明,T型和gc型可能代表2个新的种群。     

Impact of saltwater spray andsand deposition on the coastal annualTriplasis purpurea (Poaceae)

Pioneer coastal plants occur in areas where sand movement and airborne salt are common. The objectives of this study were to (1) quantify natural levels of salt and sand deposition in relation to distance from the shoreline of Staten Island, New York, and (2) experimentally determine the impact of saltwater sprays and partial sand burial on growth and reproduction of the native dunegrass Triplasis purpurea. This summer annual matures most seeds in cleistogamous spikelets on leaf sheath-enclosed axillary panicles along culm internodes. Levels of salt deposition onto T. purpurea shoots over 6 d were determined with a conductivity meter to be 175 μg/cm² at 39 m from shore in 1997, but declined rapidly with increasing distances to 90 m. Sand deposition over 1 mo in the summer averaged 30 mm at 72–90 m from shore. In a greenhouse factorial experiment, seedlings were unburied, buried to 50% height, or buried to 75% height and simultaneously subjected to no sprays, two sprays/wk, or six sprays/wk of seawater over the summer. Sand deposition increased plant size and seed production, but seawater sprays were mostly detrimental, reducing plant size, seed production, and seed mass. However, T. purpurea tolerated moderate levels of salt deposition. The stimulation of growth and reproduction in partially buried plants is adaptive on the sandy soils. Prolific seed production and tolerance to moderate levels of airborne salt allow this annual to maintain high population densities close to shore.     

A channel mechanism for electrogenic ion pumps

A model of active ion transport is analyzed in which an essential part of the pump molecule is an ion channel. Ion translocation in the channel is described as a series of jumps between binding sites which are separated by energy barriers. Pumping action results from a transient energy-dependent modification of the barrier structure of the channel and requires only minor conformational changes of the pump molecule. This model is applied to the lightdriven proton pump of Halobacterium and to redox-coupled proton pumps in the mitochondrial respiratory chain. Similar considerations may be used to describe ATP-dependent ion transport.     

A simple method to determine urea concentration using intact Helicobacter pylori and BromoCresol Purple as a pH indicator

A modified method for urea quantification, by measuring the ammonia formed by urease, used the urease-positive Helicobacter pylori in place of purified urease with a pH indicator dye, BromoCresol Purple, to provide a color change. The color formed was stable for 20-min and could be read at 588-nm for urea quantification. Using this method, urea standard curves were linear up to 8.3-mM. As there was no need for centrifugation or precipitation, the assay was developed for use with 96-well microplates.     

Convenient method to prepare neutral sulfide solution for cultivation of phototrophic sulfur bacteria

A device is described for the preparation and storage of sterile neutral sulfide solution which is required for the repeated addition of this substrate to growing cultures of phototrophic sulfur bacteria.     

水稻土中紫色光合细菌沿纬度梯度的空间分异特征

紫色光合细菌由于其代谢途径的多样性,在环境中广泛分布,是生态系统中碳循环的参与者和推动者之一。但是,水稻土中紫色光合细菌群落结构的空间分异却鲜有报道。基于此,沿我国温度梯度带(纬度梯度:28.38°N—47.43°N),采集了8个典型水稻土,利用PCR-DGGE指纹图谱和系统发育树分析揭示不同地点水稻土中紫色光合细菌群落的组成;结合多个环境因子,利用生物信息学,典范对应分析(Canonical Correspondence Analysis,CCA)和最小判别效应分析(Cladogram,LDA)明确水稻土中紫色光合细菌的空间分异规律。研究发现我国8个典型水稻土中紫色光合细菌主要由变形菌门(Proteobacteria)的α和β这两个分支组成,主要为紫色非硫细菌;p H和纬度都是驱动水稻土中紫色光合细菌群落结构分异的关键因子。该认知不仅有助于更好地揭示稻田关键功能微生物群的生物地理学分布,还有助于进一步探究我国稻田生态系统有机质转化的时空差异。     

信号分子水杨酸减缓干旱胁迫对紫御谷光合和膜脂过氧化的副效应

为研究信号分子水杨酸(SA)对干旱胁迫下紫御谷光合和膜脂过氧化的影响,为SA应用于紫御谷抗旱育苗提供理论依据,测定分析了SA处理对干旱胁迫下紫御谷幼苗叶片光合和膜脂过氧化相关指标的变化。结果表明:(1)干旱胁迫破坏了紫御谷叶绿体的膜结构,使基粒数量明显减少,垛叠不明显,排列比较松散,而SA处理能在一定程度上保护叶绿体的膜结构。(2)干旱胁迫降低了紫御谷幼苗叶片的叶绿素b和总叶绿素含量,而SA处理能提高干旱胁迫下紫御谷幼苗叶片的叶绿素a、叶绿素b、总叶绿素和胡萝卜素含量。(3)干旱胁迫降低了叶片的净光合速率、气孔导度、蒸腾速率、光饱和点和暗呼吸速率,增加了叶片的光补偿点、CO₂饱和点、CO₂补偿点和光呼吸速率,而SA处理则增加了紫御谷幼苗叶片的净光合速率、气孔导度、光饱和点和暗呼吸速率,降低了紫御谷幼苗叶片的光补偿点、CO₂饱和点、CO₂补偿点和光呼吸速率。(4)干旱胁迫降低了紫御谷幼苗叶片的F_v/F_m和Φ_PSⅡ,显著增加了叶片的相对电导率和丙二醛含量,而SA处理则增加了幼苗叶片的F_v/F_m和Φ_PSⅡ,降低了叶片的相对电导率和丙二醛含量。表明:信号分子水杨酸能够有效减缓干旱胁迫对紫御谷光合和膜脂过氧化的影响。     

中性红与去离子化紫膜（蓝膜）的相互作用

本文研究了带有正电荷的质子化中性红使去离子化紫膜（蓝膜）再生为紫膜的能力,以及再生紫膜的光化学性质,并从结合中性红的光谱特性中,探讨了结合位的微环境特点,实验结果说明,中性红具有使蓝膜再生为紫膜的能力,但再生紫膜与天然紫膜相比有较慢的光循环速率和较低的质子泵效率,结合至蓝膜上的中性红吸收最大值相对于自由中性红有明显的蓝移,说明了结合中性红是以双体形式存在于亲水环境中,文中讨论了紫膜上金属离子结合位     

Pigments, light penetration, and photosynthetic activity in the multi-layered microbial mats of Great Sippewissett Salt Marsh, Massachusetts

The multi-layered microbial mats in the sand flats of Great Sippewissett Salt Marsh were found to have five distinct layers of phototrophic organisms. The top 1–3 mm contained oxygenic phototrophs. The lower 3–4 mm contained anoxygenic phototrophic bacteria. The uppermost gold layer contained diatoms and cyanobacteria, and chlorophyll a was the major chlorophyll. The next layer down was green and was composed of primarily filamentous cyanobacteria containing chlorophyll a. This was followed by a bright pink layer of bacteriochlorophyll b-containing purple sulfur bacteria. The lowest layer was a thin dull green layer of green sulfur bacteria containing bacteriochlorophyll c. The distribution of the chlorophylls with depth revealed that two-thirds of the total chlorophyll in the mat was composed of bacteriochlorophylls present in the anoxygenic phototrophys. The cyanobacterial layers and both purple sulfur bacterial layers had photoautotrophic activity. Light was attenuated in the uppermost layers so that less than 5% of the total radiation at the surface penetrated to the layers of anoxygenic phototrophys.