Effects of habitat loss and limitation on effective population size and inbreeding rates of Walia ibex (Capra walie) in Ethiopia

The effects of habitat loss and limitation on effective population size and inbreeding rates of Walia ibex (Capra walie) were assessed at Simien Mountains National Park. Total direct census was conducted in 2009. Historical data were obtained from park offices and literatures. Effective population sizes (N_e), inbreeding rates (ΔF) and heterozygosity losses to the whole and subdivided population per habitat were estimated. Correlations (r) between the two repeated direct censuses were positive (r = 0.99, P < 0.01). The mean N_e and ΔF (%/year) per study sites were 65.34 ± 59.45 and 0.0286 ± 0.032, respectively. The ΔF of the whole population of C. walie was 0.228 ± 0.011. The ΔF was negatively correlated with N_e (r = ?0.799, P < 0.05). The mean ΔF per fragmented habitat ranged from 0.3 (Cheneck) to 7.7% (Buait ras). The highest ΔFs per year were observed in Buait ras (7.7%), Adarmaz (7.4%) and Sankaber (4.5%). The mean heterozygosity loss per total population was 0.235 ± 0.42, which was about 23.5%. The differences in N_e and ΔF among the population per habitat were the results of habitat limitation, which in turn reduce the genetic variability and foster losses of heterozygosity.     

Evaluating the ability of regional models to predict local avian abundance

Spatial modeling over broad scales can potentially direct conservation efforts to areas with high species-specific abundances. We examined the performance of regional models for predicting bird abundance at spatial scales typically addressed in conservation planning. Specifically, we used point count data on wood thrush (Hylocichla mustelina) and blue-winged warbler (Vermivora cyanoptera) from 2 time periods (1995–1998 and 2006–2007) to evaluate the ability of regional models derived via Bayesian hierarchical techniques to predict bird abundance. We developed models for each species within Bird Conservation Region (BCR) 23 in the upper midwestern United States at 800-ha, 8,000-ha, and approximately 80,000-ha scales. We obtained count data from the Breeding Bird Survey and land cover data from the National Land Cover Dataset (1992). We evaluated predictions from the best models, as defined by an information-theoretic criterion, using point count data collected within an ecological subregion of BCR 23 at 131 count stations in the 1990s and again in 2006–2007. Competing (Deviance Information Criteria <5) blue-winged warbler models accounted for 67% of the variability and suggested positive associations with forest edge and proportion of forest at the 8,000-ha scale, and negative associations with forest patch area (800 ha) and wetness (800 ha and 80,000 ha). The regional model performed best for blue-winged warbler predicted abundances from point counts conducted in Iowa during 1995–1996 (r_s = 0.57; P = 0.14), the survey period that most closely aligned with the time period of data used for regional model construction. Wood thrush models exhibited positive correlations with point count data for all survey areas and years combined (r_s = 0.58, P ≤ 0.001). In comparison, blue-winged warbler models performed worse as time increased between the point count surveys and vintage of the model building data (r_s = 0.03, P = 0.92 for Iowa and r_s = 0.13, P = 0.51 for all areas, 2006–2007), likely related to the ephemeral nature of their preferred early successional habitat. Species abundance and sensitivity to changing habitat conditions seems to be an important factor in determining the predictive ability of regional models. Hierarchical models can be a useful tool for concentrating efforts at the scale of management units and should be one of many tools used by land managers, but we caution that the utility of such models may decrease over time for species preferring relatively ephemeral habitats if model inputs are not updated accordingly. © 2012 The Wildlife Society.     

Age and sexual assault during robberies

We use data from the National Incident-Based Reporting System to examine the effects of offender and victim age on whether male offenders commit sexual assault while robbing women. Restricting analyses to robberies reveals the offenders' age preferences since it allows one to control for the effects of opportunity. We find that robbers of all ages are most likely to sexually assault women at ages 15-29 years, ages when their reproductive potential is highest. However, in contrast to the idea that rape is a direct adaptation, victims are no more likely to be raped than sexually assaulted at these ages. The age of the offender is also a strong predictor of sexual assault. The likelihood that a robber commits a sexual assault increases from age 12 years until he reaches his early thirties when it begins to decline. This age pattern corresponds, to some extent, to age differences in the male sex drive.     

珠穆朗玛峰国家自然保护区蕨类植物区系研究

在野外实地调查和室内标本整理以及查阅文献的基础上,对珠穆朗玛峰自然保护区蕨类植物区系进行研究,为探讨喜马拉雅植物区系的起源以及该区生物多样性的保护提供资料。结果表明:(1)珠穆朗玛峰自然保护区共有蕨类植物193种,隶属于31科59属,其中优势科为鳞毛蕨科(51种)、水龙骨科(41种)、蹄盖蕨科(22种)、铁角蕨科(10种),优势属为耳蕨属(27种)、鳞毛蕨属(20种)、瓦韦属(17种)。(2)科的分布区类型有8种,以泛热带分布型(55.56%)为主;属的分布区类型有14种,以泛热带分布型(23.81%)、中国-喜马拉雅分布型(19.05%)为主;蕨类植物以土生(55.88%)为主,石生(24.35%)和附生(21.76%)也占有一定比例,缺乏水生蕨类。(3)珠穆朗玛峰自然保护区蕨类植物区系成分与南迦巴瓦峰地区联系最为密切,其次为横断山地区和尼泊尔,与九塞沟自然保护区、秦岭地区有一定的联系,与西双版纳地区的关系较为疏远。     

十一五863计划"针对重大疾病的药物分子设计及产品开发"重点项目课题布局及实施情况分析

简要分析了"十一五"期间国家高技术研究发展计划(863计划)"针对重大疾病的药物分子设计及产品开发"重点项目的课题设置及实施情况。分别从本重点项目研究方向及课题设置、课题承担单位及研究人员结构、课题完成情况及所取得的代表性研究成果等方面进行了具体分析和归纳总结,供广大科技工作者参考。     

Solution structure of a cyanobacterial phytochrome GAF domain in the red-light-absorbing ground state

The unique photochromic absorption behavior of phytochromes (Phys) depends on numerous reversible interactions between the bilin chromophore and the associated polypeptide. To help define these dynamic interactions, we determined by NMR spectroscopy the first solution structure of the chromophore-binding cGMP phosphodiesterase/adenylcyclase/FhlA (GAF) domain from a cyanobacterial Phy assembled with phycocyanobilin (PCB). The three-dimensional NMR structure of Synechococcus OS-B′ cyanobacterial Phy 1 in the red-light-absorbing state of Phy (Pr) revealed that PCB is bound to Cys138 of the GAF domain via the A-ring ethylidene side chain and is buried within the GAF domain in a ZZZsyn,syn,anti configuration. The D ring of the chromophore sits within a hydrophobic pocket and is tilted by approximately 80° relative to the B/C rings by contacts with Lys52 and His169. The solution structure revealed remarkable flexibility for PCB and several adjacent amino acids, indicating that the Pr chromophore has more freedom in the binding pocket than anticipated. The propionic acid side chains of rings B and C and Arg101 and Arg133 nearby are especially mobile and can assume several distinct and energetically favorable conformations. Mutagenic studies on these arginines, which are conserved within the Phy superfamily, revealed that they have opposing roles, with Arg101 and Arg133 helping stabilize and destabilize the far-red-light-absorbing state of Phy (Pfr), respectively. Given the fact that the Synechococcus OS-B′ GAF domain can, by itself, complete the Pr → Pfr photocycle, it should now be possible to determine the solution structure of the Pfr chromophore and surrounding pocket using this Pr structure as a framework.     

Rapid incorporation of functional rhodopsin into nanoscale apolipoprotein bound bilayer (NABB) particles

Human apolipoprotein A-I (apo A-I) and its engineered constructs form discoidal lipid bilayers upon interaction with lipids in vitro. We now report the cloning, expression, and purification of apo A-I derived from zebrafish (Danio rerio), which combines with phospholipids to form similar discoidal bilayers and may prove to be superior to human apo A-I constructs for rapid reconstitution of seven-transmembrane helix receptors into nanoscale apolipoprotein bound bilayers (NABBs). We characterized NABBs by gel-filtration chromatography, native polyacrylamide gradient gel electrophoresis, UV-visible photobleaching difference spectroscopy, and fluorescence spectroscopy. We used electron microscopy to determine the stoichiometry and orientation of rhodopsin (rho)-containing NABBs prepared under various conditions and correlated stability and signaling efficiency of rho in NABBs with either one or two receptors. We discovered that the specific activity of G protein coupling for single rhos sequestered in individual NABBs was nearly identical with that of two rhos per NABB under conditions where stoichiometry and orientation could be inferred by electron microscopy imaging. Thermal stability of rho in NABBs was superior to that of rho in various commonly used detergents. We conclude that the NABB system using engineered zebrafish apo A-I is a native-like membrane mimetic system for G-protein-coupled receptors and discuss strategies for rapid incorporation of expressed membrane proteins into NABBs.     

Monitoring in the Context of Structured Decision-Making and Adaptive Management

Abstract: In a natural resource management setting, monitoring is a crucial component of an informed process for making decisions, and monitoring design should be driven by the decision context and associated uncertainties. Monitoring itself can play ≥3 roles. First, it is important for state-dependent decision-making, as when managers need to know the system state before deciding on the appropriate course of action during the ensuing management cycle. Second, monitoring is critical for evaluating the effectiveness of management actions relative to objectives. Third, in an adaptive management setting, monitoring provides the feedback loop for learning about the system; learning is sought not for its own sake but primarily to better achieve management objectives. In this case, monitoring should be designed to reduce the critical uncertainties in models of the managed system. The United States Geological Survey and United States Fish and Wildlife Service are conducting a large-scale management experiment on 23 National Wildlife Refuges across the Northeast and Midwest Regions. The primary management objective is to provide habitat for migratory waterbirds, particularly during migration, using water-level manipulations in managed wetlands. Key uncertainties are related to the potential trade-offs created by management for a specific waterbird guild (e.g., migratory shorebirds) and the response of waterbirds, plant communities, and invertebrates to specific experimental hydroperiods. We reviewed the monitoring program associated with this study, and the ways that specific observations fill ≥1 of the roles identified above. We used observations from our monitoring to improve state-dependent decisions to control undesired plants, to evaluate management performance relative to shallow-water habitat objectives, and to evaluate potential trade-offs between waterfowl and shorebird habitat management. With limited staff and budgets, management agencies need efficient monitoring programs that are used for decision-making, not comprehensive studies that elucidate all manner of ecological relationships.     

Correlates of Mortality in an Exploited Wolf Population

Abstract We investigated the influence of habitat use on risk of death from hunting and trapping of 55 radiocollared gray wolves (Canis lupus) from an exploited insular population in Southeast Alaska, USA. We compared mortality rates for resident and nonresident wolves and used Cox proportional hazards regression to relate habitat composition within 100-m circular buffers around radiolocations to risk of death of resident and nonresident wolves. In addition, we included covariates representing distances to roads, logged stands, and lakes and streams in those analyses. We also compiled harvest data from 31 harvest units within the study area to compare densities of roads and distances from human settlements with rates of harvest. During our study 39 wolves died, of which 18 were harvested legally, 16 were killed illegally, and 5 died from natural causes. Legal and illegal harvest accounted for >87% of the mortality of radiocollared resident and nonresident wolves. Mean annual survival was 0.54 (SE = 0.17) for all wolves. Annual survival was 0.65 (SE = 0.17) for resident wolves and 0.34 (SE = 0.17) for nonresidents. Very few (19%) nonresident wolves survived to colonize vacant territories or join existing wolf packs. Roads, muskegs, and distances from lakes and streams were covariates positively associated with death of resident wolves. Clear-cuts were positively associated with risk of death of nonresident wolves. Rate of harvest increased with density of roads; however, road densities >0.9 km/km² had little additional effect on harvest rates. Harvest rates decreased with ocean distances from nearest towns or settlements. Roads clearly increased risk of death for wolves from hunting and trapping and contributed to unsustainable rates of harvest. Wildlife managers should consider effects of roads and other habitat features on harvest of wolves when developing harvest recommendations. They should expect substantial illegal harvest where wolf habitat is accessible to humans. Moreover, high rates of mortality of nonresident wolves exposed to legal and illegal harvest may reduce or delay successful dispersal, potentially affecting linkages between small disjunct wolf populations or population segments. We conclude that a combination of conservative harvest regulations and large roadless reserves likely are the most effective measures for conserving wolves where risks from human-caused mortality are high.