Effect of Water Content on Glass Transition and Protein Aggregation of Whey Protein Powders During Short-Term Storage

The objectives of this study were to investigate the moisture-induced protein aggregation of whey protein powders and to elucidate the relationship of protein stability with respect to water content and glass transition. Three whey protein powder types were studied: whey protein isolate (WPI), whey protein hydrolysates (WPH), and beta-lactoglobulin (BLG). The water sorption isotherms were determined at 23 and 45°C, and they fit the Guggenheim–Andersson–DeBoer (GAB) model well. Glass transition was determined by differential scanning calorimeter (DSC). The heat capacity changes of WPI and BLG during glass transition were small (0.1 to 0.2 Jg⁻¹ °C⁻¹), and the glass transition temperature (T _g) could not be detected for all samples. An increase in water content in the range of 7 to 16% caused a decrease in T _g from 119 down to 75°C for WPI, and a decrease from 93 to 47°C for WPH. Protein aggregation after 2 weeks’ storage was measured by the increase in insoluble aggregates and change in soluble protein fractions. For WPI and BLG, no protein aggregation was observed over the range of 0 to 85% RH, whereas for WPH, ∼50% of proteins became insoluble after storage at 23°C and 85% RH or at 45°C and ≥73% RH, caused mainly by the formation of intermolecular disulfide bonds. This suggests that, at increased water content, a decrease in the T _g of whey protein powders results in a dramatic increase in the mobility of protein molecules, leading to protein aggregation in short-term storage.     

Water as a complex system: its role in ligand diffusion, general anesthesia, and sleep

The work and inspiration of Robert Rosen is stated and expressed in personal tones. The concept of passages through water (H2O) near protein surfaces is reviewed in terms of its influence on ligand diffusion to an effector. This is offered as a target for interference by a non-specific general anesthetic agent. In view of the similarities between this anesthetic state and sleep, this mechanism is proposed to be operative for the sleep/wake states. Based on this mechanism and other factors, nitrogen (N2) is proposed as an exogenous sleep factor.     

Sequence analysis and rule development of predicting protein stability change upon mutation using decision tree model

Understanding the mechanism of the protein stability change is one of the most challenging tasks. Recently, the prediction of protein stability change affected by single point mutations has become an interesting topic in molecular biology. However, it is desirable to further acquire knowledge from large databases to provide new insights into the nature of them. This paper presents an interpretable prediction tree method (named iPTREE-2) that can accurately predict changes of protein stability upon mutations from sequence based information and analyze sequence characteristics from the viewpoint of composition and order. Therefore, iPTREE-2 based on a regression tree algorithm exhibits the ability of finding important factors and developing rules for the purpose of data mining. On a dataset of 1859 different single point mutations from thermodynamic database, ProTherm, iPTREE-2 yields a correlation coefficient of 0.70 between predicted and experimental values. In the task of data mining, detailed analysis of sequences reveals the possibility of the compositional specificity of residues in different ranges of stability change and implies the existence of certain patterns. As building rules, we found that the mutation residues in wild type and in mutant protein play an important role. The present study demonstrates that iPTREE-2 can serve the purpose of predicting protein stability change, especially when one requires more understandable knowledge.     

Long-time molecular dynamics simulations of botulinum biotoxin type-A at different pH values and temperatures

Botulinum neurotoxins type A (BoNT/A) are highly potent toxins, but are also useful in the treatment of illnesses. We studied the properties of BoNT/A at various temperatures and pH values in order to understand its toxicity and structure variations. The pH values of the environment of BoNT/A are obtained by changing the protonation states of certain titratable residue groups. Our results show that certain parts of the protein are active at acidic pH environments or at high temperatures. The protein is more stable in neutral environments at normal human body temperature, whereas, at high temperature, the protein is more stable in acidic environments. Also, the three domains of the protein tend to have relative motion rather than within individual domains.     

中国黍稷种质资源蛋白质和脂肪含量的鉴定分析

对来源于我国14省（区）的6515份黍稷种质资源,通过3次大批量的蛋白质和脂肪含量的鉴定分析,计算出黍稷蛋白质、脂肪的平均含量。筛选出一批蛋白质含量15．00％以上的高蛋白种质和脂肪含量4．00％以上的高脂肪种质,以及蛋白质含量15.00％以上、脂肪含量4．00％以上的双高种质,提供我国黍稷生产和育种利用。     

Recent advances in the structural analysis of adenylation domains in natural product biosynthesis

Adenylation (A) domains catalyze the biosynthetic incorporation of acyl building blocks into nonribosomal peptides and related natural products by selectively transferring acyl substrates onto cognate carrier proteins (CP). The use of noncanonical acyl units, such as nonproteinogenic amino acids and keto acids, by A domains expands the structural diversity of natural products. Furthermore, interrupted A domains, which have embedded auxiliary domains, are able to modify the incorporated acyl units. Structural information on A domains is important for rational protein engineering to generate unnatural compounds. In this review, we summarize recent advances in the structural analysis of A domains. First, we discuss the mechanisms by which A domains recognize noncanonical acyl units. We then focus on the interactions of A domains with CP domains and embedded auxiliary domains.     

促进植物高效遗传转化的发育调节因子及其在玉米中的应用进展*

高效遗传转化技术体系的建立对植物功能基因组学研究和作物新品种的培育均具有促进作用,目前,再生效率低下是限制许多植物高效遗传转化体系建立的主要技术屏障之一。随着对植物分生组织和体细胞胚形成过程研究的深入,鉴定到了一些关键调控基因,统称为发育调节因子。发育调节因子应用于植物遗传转化后,可以有效改善植物分生组织诱导和再生能力,为提高遗传转化效率提供了重要机遇。综述了7类发育调节因子在提高植物遗传转化效率中的研究进展,重点介绍了其中3类在促进玉米遗传转化中的应用,最后展望了建立植物高效遗传转化体系的发展方向。     

黄河上游兰州-西宁城市群资源环境承载力时空分异及障碍因子诊断

基于PSR模型构建资源环境承载力评价体系,利用熵权法、综合指数模型和GIS的空间分析功能对兰州-西宁(兰西)城市群资源环境承载力进行时空动态剖析,并运用障碍度模型识别其障碍因子。结果表明: 2005—2018年,兰西城市群资源环境承载力呈波动上升态势,资源环境承载力状况较好;资源环境承载力变异系数亦有波动上升趋势,区域差异逐步扩大。资源环境承载力空间上总体呈现以兰州与西宁主城区为中心的“双核”结构特征,高水平区主要集中于以兰州市和西宁市为中心的河湟谷地及其周边部分县区,低水平区集中于城市群中部、南部地区。其中,资源环境承载力子系统指数的时空分异特征显著,压力指数呈波动下降态势,空间上呈现以兰州与西宁市区为中心向外围地区递减的分布特征;状态指数呈波动上升态势,呈东西两翼高、中部低的空间演化特征;响应指数整体呈上升态势,空间上呈东高西低、中高外低的格局特征。城镇化率、人均工业废水排放量、生活垃圾无害化处理率、水耗指数和环保投资占GDP比重是制约兰西城市群资源环境承载能力提升的主要障碍因子。     

近20年内蒙古鄂托克旗草地降水利用效率时空演变的驱动力量化

降水利用效率(PUE)是评价干旱半干旱地区草地生产力与降水关系的有效指标。为进一步探究气候变化和人类活动对草地PUE的驱动机理,本研究采用改进的CASA模型估算了2001—2020年鄂托克旗草地净初级生产力(NPP),结合同期降水量的空间插值数据获取了研究区草地PUE,利用简单线性回归和分段线性回归分析了PUE的时空演变特征及其空间格局对6类气候因子的响应,并引入基于偏导数的量化分析方法定量评估了气候变化和人类活动对PUE动态的相对贡献。结果表明: 鄂托克旗草地PUE多年均值为0.748 g C·m^-2·mm^-1,年际波动呈显著下降趋势,下降速率为0.014 g C·m^-2·mm^-1·a^-1;PUE在空间上西低东高,沿气温、降水、相对湿度、日照时数和ET₀的增长梯度呈显著的单峰分段线性模式,而沿风速梯度表现为先快后慢的持续显著增长模式;研究区94.3%的草地表现为PUE衰减态势,且有43.6%为严重衰减,这一突出问题是气候变化和人类活动共同作用导致的,二者的贡献分别为-1.162×10^-2和-0.240×10^-2 g C·m^-2·mm^-1·a^-1,而气候变化是首要驱动力,其中降水是关键气候驱动因子。