Isolation and characterization of a cDNA clone encoding an auxin influx carrier in carnation cuttings. Expression in different organs and cultivars and its relationship with cold storage

Polar auxin transport (PAT) is necessary for the formation of adventitious roots in the base of leafy stem cuttings, as has been demonstrated in several studies in which the application of PAT inhibitors strongly inhibited the rooting of cuttings. However, unlike in the case of lateral roots, there is almost no information on the molecular mechanism that controls PAT in the formation of adventitious roots. A novel cDNA encoding an auxin influx carrier has been isolated and characterized from carnation (Dianthus caryophyllus) cuttings. The full length of DcAUX1 was obtained and the deduced aminoacid sequence revealed a high degree of identity with the corresponding auxin carrier proteins from several species. The expression of this gene depended on the organ, the carnation cultivar and the length of time cuttings had been stored in a cold chamber. As a rule, expression was higher in stem than in leaves, in the basal than in the first internode and in mature than in young leaves irrespective of the cultivar and the duration of the storage. This pattern of expression agrees with the results of a previous study showing that auxin from mature leaves was essential for rooting, while exogenous auxin applied to mature leaves was polarly transported in the stem and accumulated in the basal internode (the rooting zone). Variations in the expression observed during storage (depending of the cultivar) might be related to the variation in PAT and rooting reported in previous studies.     

Sea surface distribution of coccolithophores in the eastern Pacific sector of the Southern Ocean (Bellingshausen and Amundsen Seas) during the late austral summer of 2001

Horizontal distributions of coccolithophores were observed in sea surface water samples collected on the RV Polarstern between 27 February and 10 April, 2001, in the Pacific sector of the Southern Ocean (Bellingshausen and Amundsen Seas). These samples were analyzed to gain information about the distribution of coccolithophores in relation to the oceanic fronts of the Southern Ocean. A total of fifteen species of coccolithophores were identified, showing cell abundances of up to 67 × 10³ cells/l down to 63°S. Emiliania huxleyi was the most abundant taxon, always accounting for more than 85% of the assemblage. The second most abundant species was Calcidiscus leptoporus, with values lower than 7%. Cell density increases significantly in both the Subantarctic and Polar Fronts (155 and 151 × 10³ cells/l, respectively), decreasing abruptly in the intervening Polar Frontal Zone and to the south of the Polar Front. Although temperature at high latitudes is the main factor controlling the biogeographical distribution of coccolithophores, at the regional level (Southern Ocean) the frontal systems, and consequently nutrient distribution, play a crucial role.     

Short-term behavioural response of polar bears (<Emphasis Type="Italic">Ursus maritimus</Emphasis>) to snowmobile disturbance

In this study the distance, at which polar bears detected and actively responded to approaching snowmobiles was measured and the behavioural response was recorded. The study was performed on Svalbard, an arctic island where human traffic has increased substantially in recent years. Fieldwork was conduced in April and/or May during the years 2003–2005. Polar bears were observed on ice with telescopes and binoculars. Undisturbed polar bears were observed continuously and their behaviours recorded, during the time when two snowmobiles moved toward the bear(s). Distances between the bear, the observer, and the approaching snowmobiles were measured using GPS positions taken on the track towards the bear. Data on the behavioural response of 20 encounters with bears were collected. On average, bears were alerted to the snowmobiles at 1,164 m. Mean distance at which the locomotive response occurred was 843 m, and there was a statistical significant difference in distance between sex and age classes [326 m (95% CI = 138–496 m) for adult males; 1,534 m (95% CI = 508–2,768 m) for adult females with cubs; 164 m (95% CI = 49–543 m) for two adult females without cubs; and 1,160 m (95% CI = 375–1,353 m) for single medium sized bears]. The responses of the polar bears to the snowmobiles were categorized according to intensity and persistence of reactions. Females with cubs and single medium sized bears tended to show more intense responses than adult males and lone adult females. Wind direction affects sound and odour transmission, and although an effect on response distance was not found, the response intensity was affected by wind direction. We conclude that female polar bears with small cubs in particular may have a greater risk to be disturbed, since they react at greater distances with amplified reactions; thus, users of snowmobiles should take particular care in areas where females with cubs are present.     

Complete mitochondrial genome sequences of the Arctic Ocean codfishes <Emphasis Type="Italic">Arctogadus glacialis</Emphasis> and <Emphasis Type="Italic">Boreogadus saida</Emphasis> reveal oriL and tRNA gene duplications

We have determined the complete mitochondrial genome sequences of the codfishes Arctogadus glacialis and Boreogadus saida (Order Gadiformes, Family Gadidae). The 16,644 bp and 16,745 bp mtDNAs, respectively, contain the same set of 37 structural genes found in all vertebrates analyzed so far. The gene organization is conserved compared to other Gadidae species, but with one notable exception. B. saida contains heteroplasmic rearrangement-mediated duplications that include the origin of light-strand replication and nearby tRNA genes. Examination of the mitochondrial control region of A. glacialis, B. saida, and four additional representative Gadidae genera identified a highly variable domain containing tandem repeat motifs in A. glacialis. Mitogenomic phylogeny based on the complete mitochondrial genome sequence, the concatenated protein-coding genes, and the derived protein sequences strongly supports a sister taxa affiliation of A. glacialis and B. saida.     

Differences in growth,size and sexual dimorphism in skulls of East Greenland and Svalbard polar bears (<Emphasis Type="Italic">Ursus maritimus</Emphasis>)

Size, growth and sexual dimorphism of nine skull traits was studied in 300 East Greenland and 391 Svalbard polar bears (Ursus maritimus). Two traits were significantly larger in bears from East Greenland compared to Svalbard bears, and trait size was smaller after 1960 in five traits. For both localities and both age groups (subadult, adult), mean trait size values were higher in males than females (all: P < 0.05). Gompertz growth models showed trait size increasing with age in seven traits. Depending on the trait, males reached 95% asymptotic trait size at age 3–10, females at age 2–6. The females of both localities matured at approximately the same age, whereas the Svalbard males generally matured years later than their East Greenland peers. The differences found in the present study between the two polar bear subpopulations support the notion that East Greenland and Svalbard polar bears probably should be managed as separate units.     

Continuous benthic community change along a depth gradient in Antarctic shallows: evidence of patchiness but not zonation

Many shallow water polar communities demonstrate considerable change along a bathymetric gradient. However, it is currently unclear whether community change is generally continuous or discrete. To determine the nature of community change with depth, extensive photographic surveys at three sites at Adelaide Island, West Antarctic Peninsula, were conducted along a bathymetric gradient of 5–35 m depth. Macroalgae were largely absent at the sites, so only distinguishable macrofauna were counted and analysed. Faunal abundance was greatest at the shallowest stations of the depth transects, whilst richness at both species and phylum level increased with depth. Variability in community structure between replicate transects decreased with depth, so that assemblages at >25 m depth were more homogenous. Depth had a highly significant effect on total abundance, species richness and community structure, and it is likely that the frequency of ice disturbance, which also decreases with depth, drives this pattern. Overall, high variability between transects at each site was recorded, which suggested considerable patchiness at the scale of tens of meters. Community change along the bathymetric gradient was continuous and no evidence of discrete zones of assemblages was recorded.     

Reproductive strategies in female polar and deep-sea bobtail squid genera <Emphasis Type="Italic">Rossia</Emphasis> and <Emphasis Type="Italic">Neorossia</Emphasis> (Cephalopoda: Sepiolidae)

Female reproductive features have been investigated in five polar and deep-sea bobtail squid genera Rossia and Neorossia (R. macrosoma, R. moelleri, R. pacifica, N.c. caroli and N.c. jeannae). These species are characterized by asynchronous ovary maturation, very large eggs (>10% ML), fecundity of several hundred oocytes, very high reproductive output, and continuous spawning with low batch fecundity. This adaptive complex of reproductive traits evolved in these small animals as an optimum strategy for polar and deep-water habitats.     

Movements of two Svalbard polar bears recorded using geographical positioning system satellite transmitters

Until recently, studies on polar bear (Ursus maritimus) movements and space use have used data collected by satellite telemetry collars that provided positions infrequently (typically weekly) and with low precision (by Doppler Shift method). A new generation of transmitters incorporated into collars use the Global Positioning System (GPS) to provide highly accurate positions, and have the ability to provide many positions per day. We used data from two GPS collars fitted to female polar bears, that attempted to collect six positions per day (4-h apart) for 546 days (from April 2000 to September 2001) and 413 days (from April 2000 to May 2001) to estimate how estimated speed of movement and home range size increase with increasing number of data points. Using all the positions, we estimated that the bears moved a minimum of 14.3 and 15.8 km per day on average. The fractal dimension (D) of the movement pathways for the two bears were D = 1.28 and 1.31, respectively, indicating low tortousity of the movements. Their minimum estimated annual home range areas were 20,794 and 112,183 km². Simulations showed that a commonly used sampling regime of one location every 6th day would have significantly underestimated the movement rates and the home range sizes compared to our estimates. We also used the high accuracy of GPS positions to look at distances moved within 4-h periods. Maximum movement rate during a 4-h period for the two bears was 4.21 and 4.58 km/h, respectively. Variation in median values by month was significant (0.01 km/h in November for N23476 to 1.48 km/h in December for N7955). Diurnal variation was observed to differ between defined periods.     

Population study of Astarte sulcata, da Costa, 1778, (Mollusca,Bivalvia) from two Norwegian fjords based on the fatty acid composition of the adductor muscle

Multivariate analyses of fatty acid composition of Astarte sulcata, collected in Northwest Norway in October 2005, showed significant differences between geographically close populations. This biochemical heterogeneity may have been caused by high genetic drift due to the direct development of the species. The results indicate that deep basins may provide an alternative bathymetric guide for spreading of offspring rather than being carried on currents crossing such basins. Thus, the combination of biology and topography might have led to the observed pattern that populations from opposite sides of a fjord are biochemically more distant than populations along the same side of a fjord/basin.     

Distribution of living planktonic foraminifera in the Ross Sea and the Pacific sector of the Southern Ocean (Antarctica)

In order to determine the factors controlling the distribution of planktonic foraminifera as a proxy for reconstruction of paleoenvironments, we present data on live assemblages collected in the Southern Ocean. Plankton tows and hydrographic measurements were taken in the upper 400 m of the water column at different sites in the Ross Sea (site B) and at the Polar Front of the Pacific Ocean (site O) during austral summers from 1998 to 2003.Based on qualitative micropaleontological observations we discriminated between Neogloboquadrina pachyderma dextral (dex) and N. pachyderma sinistral (sin). In addition for N. pachyderma (sin) we distinguished four morphs: the first one (1) has a thickened test and depressed sutures; the second morph (2) is represented by specimens characterized by a subspheric and heavily encrusted test; the third morph (3) has a thin and lobate walled test; the fourth one (4) represent the juvenile stage of N. pachyderma (sin) and is characterized by a smaller average size.The microfauna collected in the Ross Sea (site B) is characterized by the dominance of N. pachyderma (sin) (morphs 1 and 2), whereas low occurrences of Turborotalia quinqueloba, N. pachyderma (dex) and Neogloboquadrina dutertrei were noted in the first 50 m of the water column. The water column at this station is characterized by a marked and shallow stratification and a marked thermocline during the sampling season.At the ocean station (site O), the assemblage shows increasing diversification: T. quinqueloba, G. bulloides, N. pachyderma (dex) and few specimens of Globigerinita uvula characterize the planktonic microfauna. There is a predominance of non-encrusted morphs and juvenile specimens (3 and 4). At this station the mixed surface layer is deeper than in the Ross Sea (60–70 m), the pycnocline and the thermocline less marked.The depth and the intensity of the Deep Chlorophyll Maximum (DCM) influence foraminiferal distribution: N. pachyderma (sin) shows abundance peaks at or just below the DCM while G. bulloides peaks above the DCM. Coiling direction of N. pachyderma seems to be not controlled exclusively by Sea Surface Temperature (SST): probably the two coiling types are genetically different.Results document that diversity of planktonic foraminifera, number of specimens and variations in test morphology are related to regional differences in water properties (temperature, salinity, and DCM depth).