Impacts of Herbicide Application and Mechanical Cleanings on Growth and Mortality of Two Timber Species in Saccharum spontaneum Grasslands of the Panama Canal Watershed

Reforestation has been suggested as a strategy to control Saccharum spontaneum, an invasive grass that impedes regeneration in disturbed areas of the Panama Canal Watershed (PCW). In this study, the effects of different intensities of herbicide application and mechanical cleanings on the growth and mortality of Terminalia amazonia and Tectona grandis saplings were evaluated in S. spontaneum grasslands within the PCW. Both species exhibited greater height, basal diameter, wood volume index, wider crown diameters, deeper live crowns, and lower mortality with increasing intensity of mechanical cleanings and herbicide application. Height and competition of S. spontaneum correlated negatively with intensity of mechanical cleanings and herbicide application. Grass control costs did not differ between tree species but did increase significantly with intensity of mechanical cleanings and herbicide application. We recommend fire suppression, annual herbicide application, and at least four mechanical cleanings per year in Tec. grandis plantations during the first 3 years of plantation establishment. Given the slower initial growth and mortality patterns of Ter. amazonia, aggressive grass control treatments should be continued until individuals are sufficiently large to effectively shade S. spontaneum. Results from this study suggest that reforestation with commercial timber species can rapidly establish and control S. spontaneum growth in the PCW. Reforestation of areas already invaded or at risk of being invaded by S. spontaneum appears to be a viable strategy to reduce its abundance and subsequent negative ecological effects in the PCW.     

Sheep Grazing Decreases Organic Carbon and Nitrogen Pools in the Patagonian Steppe: Combination of Direct and Indirect Effects

We explored the net effects of grazing on soil C and N pools in a Patagonian shrub–grass steppe (temperate South America). Net effects result from the combination of direct impacts of grazing on biogeochemical characteristics of microsites with indirect effects on relative cover of vegetated and unvegetated microsites. Within five independent areas, we sampled surface soils in sites subjected to three grazing intensities: (1) ungrazed sites inside grazing exclosures, (2) moderately grazed sites adjacent to them, and (3) intensely grazed sites within the same paddock. Grazing significantly reduced soil C and N pools, although this pattern was clearest in intensely grazed sites. This net effect was due to the combination of a direct reduction of soil N content in bare soil patches, and indirect effects mediated by the increase of the cover of bare soil microsites, with lower C and N content than either grass or shrub microsites. This increase in bare soil cover was accompanied by a reduction in cover of preferred grass species and standing dead material. Finally, stable isotope signatures varied significantly among grazed and ungrazed sites, with δ¹⁵N and δ¹³C significantly depleted in intensely grazed sites, suggesting reduced mineralization with increased grazing intensity. In the Patagonian steppe, grazing appears to exert a negative effect on soil C and N cycles; sound management practices must incorporate the importance of species shifts within life form, and the critical role of standing dead material in maintaining soil C and N stocks and biogeochemical processes. Electronic supplementary material  The online version of this article (doi:) contains supplementary material, which is available to authorized users. Author Contributions  RAG designed study, performed research, analyzed data, wrote the paper; ATA designed study, wrote the paper; CGGM designed study, performed research, analyzed data; MGP performed research; OES designed study; RBJ designed study, contributed new methods.     

Enhanced chilling tolerance in Zoysia matrella by pre-treatment with salicylic acid, calcium chloride, hydrogen peroxide or 6-benzylaminopurine

Following leaf application of salicylic acid (SA), calcium chloride, hydrogen peroxide and 6-benzylaminopurine (BA), Manila grass (Zoysia matrella) plants were exposed to day/night temperature of 7/2 °C for 120 h in a growth chamber. The lower content of malondialdehyde (MDA) and H₂O₂ and higher activities of ascorbate peroxidase (APX), guaiacol peroxidase (POD) and catalase (CAT) during exposure to low temperature in pre-treated plants in comparison with control plants demonstrated that these compounds improved the chilling tolerance of Manila grass.     

Mapping ecosystem functions to the valuation of ecosystem services: implications of species–habitat associations for coastal land-use decisions

Habitats and the ecosystem services they provide are part of the world’s portfolio of natural capital assets. Like many components of this portfolio, it is difficult to assess the full economic value of these services, which tends to over-emphasize the value of extractive activities such as coastal development. Building on recent ecological studies of species–habitat linkages, we use a bioeconomic model to value multiple types of habitats as natural capital, using mangroves, sea grass, and coral reefs as our model system. We show how key ecological variables and processes, including obligate and facultative behaviors map into habitat values and how the valuation of these ecological processes can inform decisions regarding coastal development (habitat clearing). Our stylized modeling framework also provides a clear and concise road map for researchers interested in understanding how to make the link between ecosystem function, ecosystem service, and conservation policy decisions. Our findings also highlight the importance of additional ecological research into how species utilize habitats and that this research is not just important for ecological science, but it can and will influence ecosystem service values that, in turn, will impact coastal land-use decisions. While refining valuation methods is not necessarily going to lead to more rational coastal land-use decisions, it will improve our understanding on the ecological–economic mechanisms that contribute to the value of our natural capital assets. Electronic supplementary material  The online version of this article (doi:) contains supplementary material, which is available to authorized users.     

Conservation, Rearrangement, and Deletion of Gene Pairs During the Evolution of Four Grass Genomes

Gene order and content differ among homologous regions of closely related genomes. Similarities in the expression profiles of physically adjacent genes suggest that the proper functioning of these genes depends on maintaining a specific position relative to each other. To better understand the results of the interaction of these two genomic forces, convergent, divergent, and tandem gene pairs in rice and sorghum, as well as their homologs in rice, sorghum, maize, and Brachypodium were analyzed. The status of each pair in all four species: whether it was conserved, inverted, rearranged, or missing homologs was determined. We observed that divergent gene pairs had lower rates of conservation than convergent or tandem pairs, but higher rates of rearranged pairs and missing homologs in maize than in any other species. We also discovered species-specific gene pairs in rice and sorghum. In rice, gene pairs with strongly correlated expression levels were conserved significantly more often than those with little or no correlation. We assigned three types of gene pair to one of 14 possible evolutionary history categories to uncover their evolutionary dynamics during the evolution of grass genomes.     

Influence of the maize silage to grass silage ratio and feed particle size of rations for ruminants on the community structure of ruminal Firmicutes in vitro

Aims: To investigate the effect of the forage source and feed particle size (FPS) in ruminant rations on the composition of the ruminal Firmicutes community in vitro. Methods and Results: Three diets, varying in maize silage to grass silage ratio and FPS, were incubated in a rumen simulation system. Microbial samples were taken from the liquid fermenter effluents. Microbial community analysis was performed by 16S rRNA‐based techniques. Clostridia‐specific single‐strand conformation polymorphism profiles revealed changes of the community structure in dependence on both factors tested. The coarse grass silage–containing diets seemed to enhance the occurrence of different Roseburia species. As detected by real‐time quantitative PCR, Ruminococcus albus showed a higher abundance with decreasing FPS. A slightly lower proportion of Bacilli was found with increasing grass silage to maize silage ratio by fluorescence in situ hybridization (FISH). In contrast, a slightly higher proportion of bacterial species belonging to the Clostridium‐clusters XIV a and b was detected by FISH with increasing grass silage contents in the diet. Conclusions: The ruminal Firmicutes community is affected by the choice of the forage source and FPS. Significance and Impact of the Study: This study supplies fundamental knowledge about the response of ruminal microbial communities to changing diets. Moreover, the data suggest a standardization of grinding of feeds for in vitro studies to facilitate the comparison of results of different laboratories.     

干旱条件下冷季型草光合蒸腾特性的研究

对9种冷季型草在春夏季干旱条件下的光合、蒸腾等生理特性进行测定.结果表明:春季冷季型草净光合速率在6:00较低,8:00~12:00后出现最大值后逐渐下降,呈曲线变化.不同种类的日平均净光合速率,以虉草和看麦娘最高,达11μmol?m-2?s-1,匍匐剪股颖不到5μmol?m-2?s-1,其它草种居中,为6~10μmol?m-2?s-1.夏季测定时,大部分冷季型草在6:00净光合速率为全天最大值,8:00后光合速率下降,至16:00光合速率最低,几乎呈直线下降的变化.不同种类的日平均净光合速率,紫羊茅最高,为16.5μmol?m-2?s-1,鸭茅和虉草仅6~7μmol?m-2?s-1,其它草种居中.春季蒸腾速率早晨6:00~8:00最低,随后逐步升高至最高峰后又逐渐回落.不同种类的日平均蒸腾速率,看麦娘、高羊茅、虉草、草地早熟禾较高,为2 mmol?m-2?s-1左右,最低为匍匐剪股颖0.8 mmol?m-2?s-1,其它草种为1.3~1.8 mmol?m-2?s-1.夏季大部分植物在6:00蒸腾速率较高,至8:00开始回落,10:00后上升,到最高点后回降,呈多峰变化的曲线.不同种类的日平均蒸腾速率,紫羊茅最高为3.5 mmol?m-2?s-1,最低为无芒雀麦、鸭茅、虉草,为1.4~1.7 mmol?m-2?s-1,其它草种为2.1~2.8 mmol?m-2?s-1.     

Cytological evidence of natural hybridization in Brachiaria brizantha Stapf (Gramineae)

Two accessions of Brachiaria brizantha under cytological analysis showed 2 n  = 5x = 45 chromosomes. Pentaploidy probably resulted from natural hybridization between two species that were not closely related: an apomictic tetraploid male (2 n  = 4x = 36), and a sexual diploid female (2 n  = 2x = 18). The lack of affinity between genomes was clearly indicated by asynchrony during meiosis. The haploid genome ( n  = 9) showed unique behaviour, remaining univalent during prophase I and metaphase I, and undergoing sister-chromatid segregation and lagging at anaphase I. The laggard genome did not always reach the poles in time to be included in the telophase nucleus. However, when the inclusion was effective, this genome was distributed peripherally, changing the otherwise spherical nucleus shape. In the second division, the haploid genome behaved similarly, but as there was sister-chromatid segregation during the first division, the chromatids were slow to reach the poles, forming several micronuclei at telophase II. The two accessions were characterized as allo-autopentaploids, with the tetraploid genome (2 n  = 4x = 36) designated as B (from B. brizantha ) and the haploid genome as X, representing a species with a distinct genome having little affinity with the B genome. Thus, the hybrids' genome composition is represented by BBBBX. By comparing their meiotic behaviour with that observed in synthetic hybrids between B. brizantha and B. ruziziensis analysed previously, B. ruziziensis is the putative diploid sexual parent species in these pentaploid accessions.  © 2006 The Linnean Society of London , Botanical Journal of the Linnean Society , 2006, 150 , 441–446.     

Distribution,community characteristics and classification of Stipa tianschanica var. klemenzii steppe in China

Stipa tianschanica var. klemenzii steppe is the most typical formation of desert steppe in China. Based on the primary plots data obtained from fieldworks during the growing seasons from 2010 to 2016 as well as some earlier records, we studied the Stipa tianschanica var. klemenzii steppe across China systematically, including the eco-geographical distributions, community characteristics and classifications. The results showed that S. tianschanica var. klemenzii steppe distributed mainly on the Ulan Qab Plateau and western Xilin Gol Plateau. Due to the arid biotope of S. tianschanica var. klemenzii steppe, quantitative characteristics of the assemblage including height, coverage, biomass and species richness were normally lower than that of most Stipa formations in Eurasian steppe region. Moreover, 165 seed plants belonging to 85 genera and 29 families were recorded in the 80 study sites, in which rare species (occurrence frequency <20%) made up 87% of the total plants while common species and constant species could only be found occasionally. Species with the occurrence frequency exceeding 50% included S. tianschanica var. klemenzii, Convolvulus ammannii, Cleistogenes songorica, Allium tenuissimum. In addition, Hemicryptophyte and therophyte were the two dominant life forms, covering 55% and 20% of the species, respectively. As for the ecological type of water, typical xerophytes accounted for 47% of all species which is followed by super-xerophytes and meso-xerophytes. Middle Asian areal-type and east Palaeo-North areal-type were the two major floristic elements, containing 37% and 26% of the species, respectively. Based on the life forms and dominances of the species within the community, S. tianschanica var. klemenzii steppe in China could be classified into 6 association groups, 29 associations.     

Population genomic variation reveals roles of history,adaptation and ploidy in switchgrass

Geographic patterns of genetic variation are shaped by multiple evolutionary processes, including genetic drift, migration and natural selection. Switchgrass (Panicum virgatum L.) has strong genetic and adaptive differentiation despite life history characteristics that promote high levels of gene flow and can homogenize intraspecific differences, such as wind‐pollination and self‐incompatibility. To better understand how historical and contemporary factors shape variation in switchgrass, we use genotyping‐by‐sequencing to characterize switchgrass from across its range at 98 042 SNPs. Population structuring reflects biogeographic and ploidy differences within and between switchgrass ecotypes and indicates that biogeographic history, ploidy incompatibilities and differential adaptation each have important roles in shaping ecotypic differentiation in switchgrass. At one extreme, we determine that two Panicum taxa are not separate species but are actually conspecific, ecologically divergent types of switchgrass adapted to the extreme conditions of coastal sand dune habitats. Conversely, we identify natural hybrids among lowland and upland ecotypes and visualize their genome‐wide patterns of admixture. Furthermore, we determine that genetic differentiation between primarily tetraploid and octoploid lineages is not caused solely by ploidy differences. Rather, genetic diversity in primarily octoploid lineages is consistent with a history of admixture. This suggests that polyploidy in switchgrass is promoted by admixture of diverged lineages, which may be important for maintaining genetic differentiation between switchgrass ecotypes where they are sympatric. These results provide new insights into the mechanisms shaping variation in widespread species and provide a foundation for dissecting the genetic basis of adaptation in switchgrass.