Phylogeography and ethnogenesis of aboriginal Southeast Asians

Studying the genetic history of the Orang Asli of Peninsular Malaysia can provide crucial clues to the peopling of Southeast Asia as a whole. We have analyzed mitochondrial DNA (mtDNAs) control-region and coding-region markers in 447 mtDNAs from the region, including 260 Orang Asli, representative of each of the traditional groupings, the Semang, the Senoi, and the Aboriginal Malays, allowing us to test hypotheses about their origins. All of the Orang Asli groups have undergone high levels of genetic drift, but phylogeographic traces nevertheless remain of the ancestry of their maternal lineages. The Semang have a deep ancestry within the Malay Peninsula, dating to the initial settlement from Africa >50,000 years ago. The Senoi appear to be a composite group, with approximately half of the maternal lineages tracing back to the ancestors of the Semang and about half to Indochina. This is in agreement with the suggestion that they represent the descendants of early Austroasiatic speaking agriculturalists, who brought both their language and their technology to the southern part of the peninsula approximately 4,000 years ago and coalesced with the indigenous population. The Aboriginal Malays are more diverse, and although they show some connections with island Southeast Asia, as expected, they also harbor haplogroups that are either novel or rare elsewhere. Contrary to expectations, complete mtDNA genome sequences from one of these, R9b, suggest an ancestry in Indochina around the time of the Last Glacial Maximum, followed by an early-Holocene dispersal through the Malay Peninsula into island Southeast Asia.     

Changes in the ‘Connectedness’ and Resilience of Paleolithic Societies in Mediterranean Ecosystems

Human predator‐prey relationships changed dramatically in the Mediterranean Basin between 250,000 and 9,000 years ago. Many of these changes can be linked to increases in Paleolithic human population densities. Small game species are particularly diagnostic of increases in human hunting pressure and are a major source of evidence for demographic change after 40–45,000 years ago. Biomass-corrected data on prey choice also indicate increasing use of those species that possess higher reproductive efficiencies. Step-wise, apparently irreversible shifts in human predatory niche are apparent in the Mediterranean Basin, beginning with the earliest Upper Paleolithic in the east and spreading westward. Evidence of demographic pressure and greater use of resilient prey populations is followed by technological innovations to exploit these animals more efficiently. The zooarchaeological findings suggest that Middle and Lower Paleolithic reproductive units probably were not robust at the micropopulation scale, due to the rather narrow set of behavioral responses that characterized social groups at the time, and thus localized extinctions at the micropopulation level were likely to have been common. Upper Paleolithic groups were the quintessential colonizers and, in addition, uniquely good at holding on to habitat gained. Upper Paleolithic archaeological “cultures” had shorter histories of existence than those of earlier periods, but they were even more widespread geographically. The demographic robustness of the Upper Paleolithic systems may stem from wholesale strategies for evening-out or sharing risk and volatility in technology. Micropopulations were larger and often denser on landscapes, more connected via cooperative ties, and thus more robust.     

Middle Pleistocene handaxes from the Korean Peninsula

We present four biface assemblages from an archaeologically poorly known region of the Old World: Middle Pleistocene Korea. The handaxes are derived from a series of Middle Pleistocene localities in the Imjin/Hantan River Basins (IHRB) in Korea. The best known of these localities is Chongokni, although a number of equally important sites in the IHRB have been discovered and excavated over the course of the past two decades (e.g., Kumpari, Chuwoli, and Kawoli). Reanalysis of the age of the Chongokni deposits suggests a hominin occupation between 350-300 ka. Comparative study of the IHRB handaxes with the well-known bifacial implements from Olorgesailie (Kenya) and Hunsgi-Baichbal (India) indicates that the often-noted "thick" trait of the East Asian handaxes differs at a statistical level across the various regions of the Old World. The finds from the IHRB sites, and the Chinese sites of Bose and Dingcun that contain handaxes-like implement, question the validity of the Movius Line sensu stricto. However, why East Asian Middle Pleistocene hominins did not consistently produce more refined bifaces across broader regional and/or temporal facies, remains open to question. Thus, the absence of similar sites in wider areas of Early and Middle Pleistocene East Asia suggests that the Movius Line sensu lato is still supportable and warrants additional detailed cross comparative studies of the stone toolkits east and west of the line.     

Wooden objects from Ohalo II (23,000 cal BP), Jordan Valley, Israel

Eight wooden objects were found at Ohalo II, a submerged and well-preserved site in the Sea of Galilee, Israel. The fisher-hunter-gatherers' site has been radiometrically dated to 22,500-23,500 (cal BP) with 45 assays read by four laboratories. The wooden objects were found on brush-hut floors. They include a bark plank with polish and use signs, pencil-shaped specimens with longitudinal shavings, and other types that may have been decorative or symbolic. One incised wooden object is identical in size and incision pattern to a gazelle bone implement found in a grave, behind a human skull. The recovered wooden objects are not directly related to hunting, gathering, or fishing, and frustratingly, there are no remains of bows, arrows, spears, handles, or other such items. Nonetheless, the objects present a wide repertoire in terms of size, shape, and possible function. The new finds add to the growing body of evidence concerning the use of perishable materials during the Upper Paleolithic.     

Non-invasive prenatal diagnosis of single-gene disorders from maternal blood

Prenatal diagnosis (PD) is available for pregnancies at risk of monogenic disorders. However, PD requires the use of invasive obstetric techniques for fetal-sample collection and therefore, involves a risk of fetal loss. Circulating fetal DNA in the maternal bloodstream is being used to perform non-invasive prenatal diagnosis (NIPD). NIPD is a challenging discipline because of the biological features of the maternal blood sample. Maternal blood is an unequal mixture of small (and fragmented) amounts of fetal DNA within a wide background of maternal DNA. For this reason, initial NIPD studies have been based on the analysis of specific paternally inherited fetal tracts not present in the maternal genome so as to ensure their fetal origin. Following this strategy, different NIPD studies have been carried out, such as fetal-sex assessment for pregnancies at risk of X-linked disorders, RhD determination, and analysis of single-gene disorders with a paternal origin. The study of the paternal mutation can be used for fetal diagnosis of dominant disorders or to more accurately assess the risk of an affected child in case of recessive diseases. Huntington's disease, cystic fibrosis, or achondroplasia are some examples of diseases studied using NIPD. New technologies are opening NIPD to the analysis of maternally inherited fetal tracts. NIPD of trisomy 21 is the latest study derived from the use of next-generation sequencing (NGS).     

A 14C age calibration curve for the last 60 ka: the Greenland-Hulu U/Th timescale and its impact on understanding the Middle to Upper Paleolithic transition in Western Eurasia

This paper combines the data sets available today for ¹⁴C-age calibration of the last 60 ka. By stepwise synchronization of paleoclimate signatures, each of these sets of ¹⁴C-ages is compared with the U/Th-dated Chinese Hulu Cave speleothem records, which shows global paleoclimate change in high temporal resolution. By this synchronization we have established an absolute-dated Greenland-Hulu chronological framework, against which global paleoclimate data can be referenced, extending the ¹⁴C-age calibration curve back to the limits of the radiocarbon method. Based on this new, U/Th-based Greenland_Hulu chronology, we confirm that the radiocarbon timescale underestimates calendar ages by several thousand years during most of Oxygen Isotope Stage 3. Major atmospheric ¹⁴C variations are observed for the period of the Middle to Upper Paleolithic transition, which has significant implications for dating the demise of the last Neandertals. The early part of “the transition” (with ¹⁴C ages > 35.0 ka ¹⁴C BP) coincides with the Laschamp geomagnetic excursion. This period is characterized by highly-elevated atmospheric ¹⁴C levels. The following period ca. 35.0-32.5 ka ¹⁴C BP shows a series of distinct large-scale ¹⁴C age inversions and extended plateaus. In consequence, individual archaeological ¹⁴C dates older than 35.0 ka ¹⁴C BP can be age-calibrated with relatively high precision, while individual dates in the interval 35.0-32.5 ka ¹⁴C BP are subject to large systematic age-‘distortions,’ and chronologies based on large data sets will show apparent age-overlaps of up to ca. 5,000 cal years. Nevertheless, the observed variations in past ¹⁴C levels are not as extreme as previously proposed (“Middle to Upper Paleolithic dating anomaly”), and the new chronological framework leaves ample room for application of radiocarbon dating in the age-range 45.0-25.0 ka ¹⁴C BP at high temporal resolution.     

From the Bay of Naples to the River Don: the Campanian Ignimbrite eruption and the Middle to Upper Paleolithic transition in Eastern Europe

The Campanian Ignimbrite (CI) eruption, dated by ⁴⁰Ar/³⁹Ar and various stratigraphic methods to ca. 39,000 cal BP, generated a massive ash plume from its source in southern Italy across Southeastern and Eastern Europe. At the Kostenki-Borshchevo open-air sites on the Middle Don River in Russia, Upper Paleolithic artifact assemblages are buried below, within, and above the CI tephra (which is redeposited by slope action at most sites) on the second terrace. Luminescence and radiocarbon dating, paleomagnetism, and soil and pollen stratigraphy provide further basis for correlation with the Greenland and North Atlantic climate stratigraphy. The oldest Upper Paleolithic occupation layers at Kostenki-Borshchevo may be broadly correlated with warm intervals that preceded the CI event and Heinrich Event 4 (HE4; Greenland Interstadial: GI 12-GI 9) dating to ca. 45,000-41,000 cal BP. These layers contain an industry not currently recognized in other parts of Europe. Early Upper Paleolithic layers above the CI tephra are correlated with HE4 and warm intervals that occurred during 38,000-30,000 cal BP (GI 8-GI 5), and include an assemblage that is assigned to the Aurigancian industry, associated with skeletal remains of modern humans.     

Human influence on distribution and extinctions of the late Pleistocene Eurasian megafauna

Late Pleistocene extinctions are of interest to paleontological and anthropological research. In North America and Australia, human occupation occurred during a short period of time and overexploitation may have led to the extinction of mammalian megafauna. In northern Eurasia megafaunal extinctions are believed to have occurred over a relatively longer period of time, perhaps as a result of changing environmental conditions, but the picture is much less clear. To consider megafaunal extinction in Eurasia, we compare differences in the geographical distribution and commonness of extinct and extant species between paleontological and archaeological localities from the late middle Pleistocene to Holocene. Purely paleontological localities, as well as most extinct species, were distributed north of archaeological sites and of the extant species, suggesting that apart from possible differences in adaptations between humans and other species, humans could also have a detrimental effect on large mammal distribution. However, evidence for human overexploitation applies only to the extinct steppe bison Bison priscus. Other human-preferred species survive into the Holocene, including Rangifer tarandus, Equus ferus, Capreolus capreolus, Cervus elaphus, Equus hemionus, Saiga tatarica, and Sus scrofa. Mammuthus primigenius and Megaloceros giganteus were rare in archaeological sites. Carnivores appear little influenced by human presence, although they become rarer in Holocene archaeological sites. Overall, the data are consistent with the conclusion that humans acted as efficient hunters selecting for the most abundant species. Our study supports the idea that the late Pleistocene extinctions were environmentally driven by climatic changes that triggered habitat fragmentation, species range reduction, and population decrease, after which human interference either by direct hunting or via indirect activities probably became critical.     

Innovation and technological knowledge in the Upper Paleolithic of Northern Eurasia

The technology of modern humans is unique in the animal kingdom with respect to its complexity and capacity for innovation. Evidence of technological complexity and creativity in the archeological record is broadly coincident with and presumably related to traces of creativity in art, music, ritual, and other forms of symbolism. The pattern of modern human technology is part of a larger package of behavior (sometimes referred to as “behavioral modernity”) that emerges with the appearance of industries in Eurasia classified as Upper Paleolithic, but has deeper roots in the African Middle Stone Age. 1 - 5 .