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61.
Adam Parslow Albert Cardona Robert J. Bryson-Richardson 《Journal of visualized experiments : JoVE》2014,(86)
The generation of four-dimensional (4D) confocal datasets; consisting of 3D image sequences over time; provides an excellent methodology to capture cellular behaviors involved in developmental processes. The ability to track and follow cell movements is limited by sample movements that occur due to drift of the sample or, in some cases, growth during image acquisition. Tracking cells in datasets affected by drift and/or growth will incorporate these movements into any analysis of cell position. This may result in the apparent movement of static structures within the sample. Therefore prior to cell tracking, any sample drift should be corrected. Using the open source Fiji distribution 1 of ImageJ 2,3 and the incorporated LOCI tools 4, we developed the Correct 3D drift plug-in to remove erroneous sample movement in confocal datasets. This protocol effectively compensates for sample translation or alterations in focal position by utilizing phase correlation to register each time-point of a four-dimensional confocal datasets while maintaining the ability to visualize and measure cell movements over extended time-lapse experiments. 相似文献
62.
学籍管理是高校教学管理工作的一项重要内容,是保证高校正常教学秩序,形成良好学风、教风和校风的重要保障。电子注册则是传统学籍管理工作在新形势下的延续和发展。实现电子注册,对保证高等教育质量,维护高校的社会形象和大学生的合法权益,起着很重要的保障作用。学籍管理是实施电子注册的基础,电子注册则是加强学籍管理的有效手段。 相似文献
63.
1H NMR spectroscopy is one of the techniques whose potential is currently being explored in the emerging field of metabolomics. It is a non-targeted method, producing signals for all proton-containing chemical species. For crude plant materials the spectra are always complex, with many signals overlapping. Hence a most suitable approach for analysing them is 'metabolite fingerprinting', which is aimed at highlighting compositional similarities and exploring the overall natural variability in a population of samples. The most commonly used method for this is principal component analysis (PCA), as it allows the whole spectral trace to be analysed and the vast quantity of information to be simplified. In this paper we investigate whether there are factors which may affect the NMR spectra in a way that subsequently decreases the robustness of the metabolite fingerprinting by PCA. Imperfections in the signal registration (i.e. inconsistency of the peak position) are generally detrimental to analysing whole traces by multivariate methods. The sources of such problems are illustrated through specially designed repeatability studies using potato and tomato samples, and the analysis of a tea dataset containing many samples. Careful sample preparation can help to limit peak shifts; for instance here by attempting to control the pH of the extracts. In addition, some compounds are susceptible to interactions affecting their chemical shifts and mathematical alignment of peaks may be necessary. Lastly factors such as resolution can also affect analyses and must be carefully adjusted. Our choice of examples aims to raise awareness of potential problems. We do not question the validity of the NMR approach, but point out those areas where special care may need to be taken. 相似文献
64.
E. Brännäs 《Journal of fish biology》2014,84(1):133-144
Feeding activity from a larger refuge site into two visually separated feeding sites with temporally restricted food availability, one in the morning and one in the evening was studied in duplicate groups of Arctic charr Salvelinus alpinus. A passive integrated transponder (PIT) system enabled continuous monitoring of individual movements between the sites. Both groups synchronized their diel pattern of visit activity to the two feeding sites when food was available. One group showed significant anticipatory visit activity into both feeding sites during the hours before the feed was available, suggesting a time and place learning of resource availability. The anticipatory activity of the other group was, however, less pronounced and only occurred into one of the feeding sites. Individual S. alpinus entered the feeding sites independently and no obvious patterns of leaders and followers were identified. All S. alpinus gained mass and moved between a refuge and the feeding sites. Different strategies of how individual S. alpinus utilized the feeding sites were not correlated with growth. 相似文献
65.
In this contribution we describe the implementation of a novel solution for image guided particle therapy, designed to ensure the maximal accuracy in patient setup. The presented system is installed in the central treatment room at Centro Nazionale di Adroterapia Oncologica (CNAO, Italy), featuring two fixed beam lines (horizontal and vertical) for proton and carbon ion therapy. Treatment geometry verification is based on robotic in-room imaging acquisitions, allowing for 2D/3D registration from double planar kV-images or 3D/3D alignment from cone beam image reconstruction. The calculated six degrees-of-freedom correction vector is transferred to the robotic patient positioning system, thus yielding automated setup error compensation. Sub-millimetre scale residual errors were measured in absolute positioning of rigid phantoms, in agreement with optical- and laser-based assessment. Sub-millimetre and sub-degree positioning accuracy was achieved when simulating setup errors with anthropomorphic head, thorax and pelvis phantoms. The in-house design and development allowed a high level of system customization, capable of replicating the clinical performance of commercially available products, as reported with preliminary clinical results in 10 patients. 相似文献
66.
PurposeAn investigation was carried out into the effect of three image registration techniques on the diagnostic image quality of contrast-enhanced magnetic resonance angiography (CE-MRA) images.MethodsWhole-body CE-MRA data from the lower legs of 27 patients recruited onto a study of asymptomatic atherosclerosis were processed using three deformable image registration algorithms. The resultant diagnostic image quality was evaluated qualitatively in a clinical evaluation by four expert observers, and quantitatively by measuring contrast-to-noise ratios and volumes of blood vessels, and assessing the techniques' ability to correct for varying degrees of motion.ResultsThe first registration algorithm (‘AIR’) introduced significant stenosis-mimicking artefacts into the blood vessels' appearance, observed both qualitatively (clinical evaluation) and quantitatively (vessel volume measurements). The two other algorithms (‘Slicer’ and ‘SEMI’), based on the normalised mutual information (NMI) concept and designed specifically to deal with variations in signal intensity as found in contrast-enhanced image data, did not suffer from this serious issue but were rather found to significantly improve the diagnostic image quality both qualitatively and quantitatively, and demonstrated a significantly improved ability to deal with the common problem of patient motion.ConclusionsThis work highlights both the significant benefits to be gained through the use of suitable registration algorithms and the deleterious effects of an inappropriate choice of algorithm for contrast-enhanced MRI data. The maximum benefit was found in the lower legs, where the small arterial vessel diameters and propensity for leg movement during image acquisitions posed considerable problems in making accurate diagnoses from the un-registered images. 相似文献
67.
68.
Eike Rosenfeld Rudolph Millner Wolf-Rdiger Grosse Joseph Schuh 《International Review of Hydrobiology》1985,70(2):287-293
An ultrasonic technique based on the Doppler effect is presented to allow the registration of aquatic animal movements. The method was tested on crucians (Carassius carassius) in an aquarium as part of chronobiological investigations. Comparison with light barrier measurements shows that the Doppler technique is suitable for detecting typical circadian and seasonal changes in the motor activity of the fishes. The features of the ultrasonic method are discussed. 相似文献
69.
随着“互联网+”的推广及普遍应用,基于互联网的信息技术在医疗服务行业迅速发展。网络预约挂号和移动支付等挂号缴费新模式的推行为解决医院“三长一短”的问题带来了新的契机。通过对“互联网+”背景下医院在挂号、缴费等方面的现状研究,提出了新模式下可能存在的问题及改进建议。
相似文献70.
使用了一种基于Radon变换的技术来进行二维的MRI图像配准。MRI的图像配准一般使用灰度配准,而Radon变换一般用于CT图像的重建,虽然现已经存在使用Radon变换进行图像配准,但是比较繁琐,我们对这一配准算法进行了简化。 相似文献