cDNA cloning and sequence analysis of the Xenopus laevis egg envelope glycoprotein gp43

The glycoproteins of the Xenopus laevis egg envelope function in fertilization and development. As the unfertilizable coelomic egg transits the pars recta region of the oviduct, it is converted to a fertilizable egg by limited proteolysis of the envelope glycoprotein gp43 to gp41. This conversion is caused by an oviductally secreted serine active site protease, oviductin. We cloned a cDNA for gp43 from an oocyte cDNA library. The cDNA encoded a 454 amino acid protein homologous to the ZPC family of glycoproteins previously shown to be present in mammalian and fish egg envelopes. Conserved ZPC domains and motifs present in the Xenopus sequence included a signal peptide sequence, an N-linked glycosylation site, and 12 aligned Cys residues. In mammalian and Xenopus sequences, a furin-like (convertase) site and a C-terminal transmembrane domain were present reflecting the biosynthesis of ZPC in these species via the secretory glycoprotein pathway. However, fish envelope glycoproteins lack these sequences since they are synthesized via a different route (in the liver, transported to the ovary, and assembled into the egg envelope surrounding the oocyte). Consensus amino acid residues were identified by sequence comparisons of seven ZPC family members; 19% of the amino acid residues were invariant and 48% of the residues were identical in at least four of the seven sequences. The consensus sequence was used to make structure-fertilization function predictions for this phylogenetically conserved family of glycoproteins.     

Diverse transporters for neutral amino acids in Ricinus communis L. seedlings

Uptake mechanisms for neutral amino acids were investigated by expression of mRNA isolated from seedlings of Ricinus communis L. in Xenopus laevis oocytes. After injection of mRNA from root, hypocotyl and cotyledon currents elicited by saccharose and neutral amino acids ranged from 0.3 nA up to 2 nA depending on the respective substrate and the source of mRNA. These currents were due to expression of low affinity uptake mechanisms and the KM values found for amino acid induced charge flow range from 1 to 2 mM. The abundance and/or the specificity of the expressed mechanisms differ in the various tissues. Currents of similar magnitude were recorded for alanine and glutamine with mRNA isolated from root, hypocotyl and cotyledons. Serine and proline induced currents after injection of mRNA from hypocotyl and roots, in case of α-aminoisobutyric acid (AIB) induced currents were generally small with mRNA from all tissues tested. In addition, differential sensitivity of glutamine and AIB uptake in the high affinity range was evident towards the amino acid analogue 2-chloro-aminophenoxybutyric acid which indicated an additional set of carriers operating in the micromolar concentration range. The results suggest that multiple transporters for neutral amino acids exist in various tissues of the plant differing in specificity of charge flow and in sensitivity towards the inhibitor 2-chloro-aminophenoxybutyric acid. This revised version was published online in July 2006 with corrections to the Cover Date.     

OCCURRENCE OF THREE NITZSCHIA (BACILLARIOPHYCEAE) TAXA WITHIN COLONIES OF TUBE-FORMING DIATOMS1

In benthic samples from the unchannelized Missouri River, the diatoms Nitzschia dissipata (Kütz.) Grun., N. filiformis (W.Sm.) Schütt and N. pseudofonticola Hust. were observed within the mucilage tubes of four tube-forming diatoms: Cymbella prostrata (Berk.) Cl., C. prostrata var. auerswaldii (Rabh.) Reim., Navicula tripunctata var. schizonemoides (V.H.) Patr., and Nitzschia filiformis. Microscopical observations of live and preserved specimens indicated that “invasion” by Nitzschia occurred primarily in older tubes. Data are presented on the environmental conditions in which the tube-formers and their cohabitants have been found.     

Over 4100 protein identifications from a Xenopus laevis fertilized egg digest using reversed‐phase chromatographic prefractionation followed by capillary zone electrophoresis–electrospray ionization–tandem mass spectrometry analysis

A tryptic digest generated from Xenopus laevis fertilized embryos was fractionated by RPLC. One set of 30 fractions was analyzed by 100‐min CZE‐ESI‐MS/MS separations (50 h total instrument time), and a second set of 15 fractions was analyzed by 3‐h UPLC‐ESI‐MS/MS separations (45 h total instrument time). CZE‐MS/MS produced 70% as many protein IDs (4134 versus 5787) and 60% as many peptide IDs (22 535 versus 36 848) as UPLC‐MS/MS with similar instrument time (50 h versus 45 h) but with 50 times smaller total consumed sample amount (1.5 μg versus 75 μg). Surprisingly, CZE generated peaks that were 25% more intense than UPLC for peptides that were identified by both techniques, despite the 50‐fold lower loading amount; this high sensitivity reflects the efficient ionization produced by the electrokinetically pumped nanospray interface used in CZE. This report is the first comparison of CZE‐MS/MS and UPLC‐MS/MS for large‐scale eukaryotic proteomic analysis. The numbers of protein and peptide identifications produced by CZE‐ESI‐MS/MS approach those produced by UPLC‐MS/MS, but with nearly two orders of magnitude lower sample amounts.     

Sequence analysis of the upstream regions of Xenopus laevis β-globin genes and arrangement of repetitive elements within the globin gene clusters

The globin gene clusters of Xenopus laevis are interspersed by various different repetitive DNA elements. A specific repeat, the JH12 element, has been mapped by Southern analysis and some of its locations have been subsequently confirmed by nucleotide sequencing. JH12 family members seem to represent mobile genetic elements and display a high degree of divergence. The nucleotide sequences upstream to the adult _I-globin gene and to the two coordinately expressed larval _I- and _II genes have been determined and compared to those of the adult -genes. Besides some repetitive DNA elements and a short sequence of rather weak homology we have found no characteristic sequence motifs to be common to the adult - and -genes. The two larval -genes share one short sequence element being absent from the adult genes. This might reflect completely different sequence requirements for protein interactions and for the regulation of adult and larval globin gene expression.     

爪蟾(Xenopus laevis)的雄性二倍体成体的产生

野生型爪蟾的色素基因是显性,a~p白化型的色素基因是隐性。用a~p型精子与野生型卵子受精,以UV照射卵子使卵核失活,再用静液压方法抑制受精卵的第一次核分裂,结果产生雄核发育的二倍体(androgenetic diploid)。它们是核质杂种。这些杂种发育时黑色素细胞出现时期同野生型一致。色素细胞的数目和颜色介于野生型和白化型之间。当白化型蝌蚪本来就极少的色素细胞消退时,杂种蝌蚪仍有许多色素细胞,直至变态完成两个月后色素才完全消退。因此核质杂种黑色素细胞的发育并维持到变态后,归因于野生型卵细胞质对a~p型核的作用。??实验还证明了仅具有父本基因组的爪蟾能发育至成体,性成熟,均为雄性。其精子与正常卵结合产生发育正常的下一代。现已变态成为幼蟾。     

Substance P-related peptides in the hypothalamus of Amphibia

Summary The occurrence of Substance P-(SP)-related peptides in the hypothalamus of three species of Amphibia (newt, clawed, toad, frog) was studied immunohistochemically employing the indirect immunofluorescence method or a double-step technique (indirect immunofluorescence followed by the peroxidase-antiperoxidase complex method). SP-like immunopositive fibers are seen throughout the hypothalamus. They are especially abundant in the preoptic area and in the outer zone of the median eminence, suggesting a role of SP-related peptides in the hypothalamo-hypophysial regulation in these animals. Some SP-like neurons are seen in the posterior hypothalamus and in the preoptic area. In the newt, such SP-like immunopositive neurons occur frequently in the preoptic periventricular grey.Work performed under the C.N.R. project Biologia della Riproduzione     

NITZSCHIA ALICAE SP. NOV. AND N. PURIFORMIS SP. NOV., NEW DIATOMS FROM EUROPEAN RIVERS AND COMPARISON WITH THE TYPE MATERIAL OF N. SUBLINEARIS AND N. PURA1

Nitzschia sublinearis Hustedt and N. pura Hustedt are common oligosaprobic freshwater diatom species that frequently occur in diatom inventories, thus being important in water quality studies. Both are considered as species with overlapping diagnostic criteria in several floras, which is typical of the whole genus Nitzschia. The type material of Hustedt of N. sublinearis and N. pura was examined using LM and EM in order to document the range of variation within the type populations and to compare it with populations occurring in different European rivers. Detailed observations allowed recognition of two new freshwater diatom species: N. alicae sp. nov., occurring in mesotrophic up to eutrophic conditions, and N. puriformis sp. nov., mostly occurring in oligotrophic habitats, both in rivers and streams at middle and high altitudes. The most reliable taxonomic features that separate both new species from the most similar taxa are the density of fibulae and striae, valve shape, and valve width as well as the shape of areolae. Morphological examination of different populations indicates that N. puriformis is relatively common in European rivers and has been overlooked to date and confounded with N. pura by several researchers. By contrast, N. alicae has, to date, been collected only in Slovakia and Northern Italy, but with a high frequency of occurrence and sometimes in high abundance at sites.