Characterisation and genetic diversity of pepper leafroll virus,a new bipartite begomovirus infecting pepper,bean and tomato in Peru

The complete genome of a novel bipartite begomovirus (genus Begomovirus, family Geminiviridae) was cloned from a severely diseased yellow Peruvian chili pepper (Capsicum baccatum cv. Pendulum) plant collected in the department of La Libertad, Northern Peru and full‐length sequenced. The two genomic components share a common region of 156 nucleotides with a 100% sequence identity. Analysis of the genome organisation and phylogenetic comparisons revealed that the virus is a typical New World begomovirus. The closest related begomovirus, an isolate of Tomato yellow vein streak virus (ToYVSV), shared only 76.8% nucleotide sequence identity for the DNA‐A component. Therefore, following species demarcation criteria of the International Committee on Taxonomy of Viruses, this virus isolate belongs to a new begomovirus species for which the name pepper leafroll virus (PepLRV) is proposed. Pepper plants infected with the cloned PepLRV isolate developed leaf roll symptoms similar to those observed in field‐infected plants suggesting this virus as the causal agent of the disease syndrome observed in the field. Widespread occurrence of PepLRV throughout Peru was demonstrated, infecting plants of diverse cultivated species such as tomato, pepper, common and pallar beans, and of the weed species Nicandra physaloides. Low genetic diversity was observed among PepLRV isolates present in this country with no evident geographical or temporal structure of the population, typical of a recent founder effect. This is the first report of a begomovirus infecting pepper and bean crops in Peru.     

Aphid behavioral responses to virus‐infected plants are similar despite divergent fitness effects

We compared the settling preferences and reproductive potential of an oligophagous herbivore, the pea aphid, Acyrthosiphon pisum Harris (Hemiptera: Aphididae), in response to pea plants, Pisum sativum L. cv. ‘Aragorn’ (Fabaceae), infected with two persistently transmitted viruses, Pea enation mosaic virus (PEMV) and Bean leaf roll virus (BLRV), that differ in their distribution within an infected plant. Aphids preferentially oriented toward and settled on plants infected with PEMV or BLRV in comparison with sham‐inoculated plants (plants exposed to herbivory by uninfected aphids), but aphids did not discriminate between plants infected with the two viruses. Analysis of plant volatiles indicated that plants inoculated with either virus had significantly higher green leaf volatile‐to‐monoterpene ratios. Time until reproductive maturity was marginally influenced by plant infection status, with a trend toward earlier nymph production on infected plants. There were consistent age‐specific effects of plant infection status on aphid fecundity: reproduction was significantly enhanced for aphids on BLRV‐infected plants across most time intervals, though mean aphid fecundity did not differ between sham and PEMV‐infected plants. There was no clear pattern of age‐specific survivorship; however, mean aphid lifespan was reduced on plants infected with PEMV. Our results are consistent with predictions of the host manipulation hypothesis, extended to include plant viruses: non‐viruliferous A. pisum preferentially orient to virus‐infected host plants, potentially facilitating pathogen transmission. These studies extend the scope of the host manipulation hypothesis by demonstrating that divergent fitness effects on vectors arise relative to the mode of virus transmission.     

盐胁迫下绿豆幼苗的超微弱发光

对不同NaCl浓度胁迫下绿豆种子早期萌发时的超微弱发光变化进行了初步研究。结果表明,随。NaCl浓度的增加,绿豆胚根的生长速度(根长)减慢,生长受到明显抑制,其超微弱发光的强度显著下降。萌发期间,SOD活性随着盐浓度的增加而降低,其活性与生物光子强度有极为密切的关系。这些结果表明生物超微弱发光探测技术有可能成为植物盐胁迫研究的有效工具,对于进一步理解盐胁迫机理有一定的意义。     

Winter warming effects on overwinter survival,energy use,and spring emergence of Cerotoma trifurcata (Coleoptera: Chrysomelidae)

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Mechanism of DNA cleavage catalyzed by Mung Bean Nuclease

The interaction of zinc with different forms of DNA (λ phage DNA, ss-oligo, ds-oligo) and Mung Bean Nuclease was studied by voltammetric techniques in order to investigate the mechanism of DNA cleavage catalyzed by a zinc metalloenzyme. Stoichiometry, dissociation constant, zinc binding sites and functions were determined for these systems. Two zinc ions were found to be involved in stabilization of a 19 mer ds-oligodeoxyribonucleotide, which was synthesized by the phosphoramidite method and used as a DNA model in the studies. Three zinc ions (Zn1, Zn2, and Zn3), which have different roles in ds-oligo cleavage, were identified in the active site of Mung Bean Nuclease. A concerted S_N2 mechanism, which assigns a catalytic function to Zn2 and structural functions to Zn1 and Zn3, was proposed. The hydrolysis of phosphodiester bonds proceeds with inversion of configuration at the phosphorus center, forming a pentacoordinate transition state, which is stabilized by an arginine. Zn2 supplies the nucleophile, which is oriented by an aspartic acid, and activates the ds-oligo by its coordination to the phosphate free oxygen of the phosphodiester bond. Zn1 and Zn3 ions, besides stabilizing the tertiary structure of Mung Bean Nuclease, bind to the leaving group, blocking the cleavage reverse reaction.     

A fluorescent PCR assay for the codominant interpretation of a dominant SCAR marker linked to the virus resistance allele bc-1 2 in common bean

Our objective was to develop a rapid and accurate procedure to genotype common bean plants for the bc-1 ² allele, which conditions resistance to bean common mosaic and bean common mosaic necrosis viruses. A segregating F₂ population was derived from the cross between pinto bean breeding lines P94207-43 (bc-1 ²//bc-1 ²) and P94207-189 (bc-1//bc-1). A quantitative PCR assay based on the detection of fluorescent labeled amplicons was developed to distinguish between homozygous (bc-1 ²//bc-1 ²), heterozygous (bc-1 ²//bc-1) and null (bc-1//bc-1) F₂ genotypes. Remnant F₁ plants were used as a comparative reference sample. PCR results among this sample fit a normal distribution, and 99% and 95% confidence intervals for heterozygotes were determined. F₂ plants for which no amplification was detected were classified as null (bc-1//bc-1) genotypes. F₂ plants that fell within the confidence intervals for heterozygotes were classified as heterozygotes (bc-1 ²//bc-1), while plants that fell outside the right tail of the heterozygote confidence intervals were classified as homozygotes (bc-1 ²//bc-1 ²). F₂ plants were also genotyped for the bc-1 ² allele by performing F₃ family progeny tests for virus resistance. Agreement between the two methods for genotyping plants was 100% (59/59) when PCR genotyping was based on a 99% heterozygote confidence interval, and 98.3% (58/59) when based on a 95% heterozygote confidence interval. This assay will accelerate breeding for virus resistance in bean by facilitating discrimination among plants that are heterozygous or homozygous for the bc-1 ² allele. The experimental design may be generally applicable towards developing other assays for the codominant interpretation of dominant markers in diploid plants.     

绿豆芽中微管蛋白异型的研究

采用 DEAE-Sephadex-A50离子交换层析和 PGGE 电泳对绿豆(Phaseolus radiatus L.)芽中的微管蛋白进行分离。Western blot 和免疫点印迹分析发现了两种聚合度不同的微管蛋白异型。单体微管蛋白亚基的分子量为56kD 和56.5kD;四聚体微管蛋白亚基的分子量为54kD 和54.5kD。实验结果表明微管蛋白α、β亚基组装过程是一个相互选择的过程,这种现象可能与微管蛋白基因表达有关。     

The Effect of the Ethylene Action Inhibitor 1-Cyclopropenylmethyl Butyl Ether on Early Plant Growth

Increased levels of ethylene in plants are responsible for many deleterious effects such as early senescence, fruit deterioration and inhibition of root elongation. Several cyclopropene derivatives have previously been studied as inhibitors of ethylene action in plants. This study focuses on one such compound, 1-cyclopropenylmethyl butyl ether and its effect on the growth of roots and shoots of canola plants as well as rooting of mung bean seedlings 1-cyclopropenylmethyl butyl ether increased root length in canola plants, but had no significant effect on shoot length. In rooting studies, mung bean seedlings treated with 1-cyclopropenylmethyl butyl ether prior to root excision had fewer numbers of roots than control plants that were not treated with the ethylene action inhibitor. The same rooting study, when repeated in the presence of 1-aminocyclopropane-1-carboxylic acid (ACC), demonstrated an overall increase in the number of roots of inibitor-treated and non-treated plants, however, the inhibitor was still effective in decreasing the number of roots, compared to its non-treated conterpart. Online publication: 7 April 2005     

蚕豆萎蔫病毒—新疆番茄分离株的鉴定

在新疆番茄斑驳病株上分离出一种球状病毒,回接到番茄上产生斑驳症状。病毒粒体为２０面体,平均直径２５ｎｍ。经汁液摩擦接种可感染昆诺阿藜、苋色藜、蚕豆、番茄等１８种植物,不感染菜豆、豇豆、豌豆、六叶茄、黄瓜等。可由桃蚜传毒。在琼脂双扩散试验中,能与蚕豆萎蔫病毒（ＢＢＷＶ）抗血清产生明显的沉淀线,与豇豆花叶病毒（ＣｐＭＶ）、黄瓜花叶病毒（ＣＭＶ）抗血清均不发生反应。纯化病毒紫外扫描呈典型的核蛋白吸收叫线,病毒衣壳蛋白由两种蛋白亚基构成,其分子量分别为４５９００和２０４００道尔顿,由１８种氨基酸约２５５个氨基酸残基组成。病毒核酸是双组份的,它们的分子量为１３２００００和２３４００００道尔顿。根据上述结果认为该病毒是蚕豆萎蔫病毒侵染番茄的一个株系。     

绿豆幼苗生长状态对环境羟基自由基水平的影响

为了解植物生长状态对环境羟基自由基水平的影响,研究了相同培养条件下不同生长状态的绿豆(Vigna radiata)幼苗对空气中的羟基自由基水平的影响。结果表明,正常生长的绿豆幼苗周围环境羟基自由基水平显著高于没有植物生长的环境,失活幼苗对周围环境羟基自由水平没有显著影响;渗透胁迫的绿豆幼苗对环境羟基自由基水平影响极显著,渗透胁迫程度不同其影响程度也有所不同;绿豆幼苗对环境羟基自由基水平的影响与其呼吸速率密切相关。这证明绿豆幼苗生长对环境羟基自由基水平有影响,且这种影响依赖于其生理代谢过程及生长状态。