Modelling environmentally mediated spread of livestock-associated methicillin-resistant Staphylococcus aureus in a pig herd

Infectious disease models are a useful tool to support within-herd disease control strategies. This study presents a stochastic compartment model with environmentally mediated transmission to represent the spread of livestock-associated methicillin-resistant Staphylococcus aureus (LA-MRSA) in a farrow-to-finish pig herd. The aims of the study were to (1) construct a model of the spread of LA-MRSA that included spread of LA-MRSA through the environment; (2) parameterise the model to fit previously published observational data in order to obtain realistic LA-MRSA transmission rates; (3) and to investigate how changes in the mixing of animals in the farrowing and finishing units may affect the prevalence of LA-MRSA in a herd. The results showed that indirect transmission allowed LA-MRSA to persist in the herd without the assumption of persistently shedding individuals. Reducing the mixing of pigs upon entry to the finishing unit was also shown to lower the LA-MRSA prevalence in the unit if the initial LA-MRSA level in the unit was low, but at high prevalence, no effect of mixing was identified. In the farrowing unit, changing the proportion of piglets that were cross-fostered did not affect the within-herd LA-MRSA prevalence. The study demonstrates that there are several important knowledge gaps regarding the shedding and transmission of LA-MRSA in different animal age groups and further experimental studies are needed. This work also provides a new, robust and flexible model framework for the investigation of control and mitigation strategies for LA-MRSA and other infections in a pig herd.     

UNDERSTANDING THE PHYSICAL STRUCTURE OF SOUTHERN AFRICA'S STANDING WATERS

SUMMARY

An examination of the nature of the stratification in polymictic and monomictic Southern African reservoirs is presented. Wind stirring is the principal mode of heat transfer during spring heating. In high summer radiation from stable heated surface layers is responsible for the generation of turbulent kinetic energy (TKE) as a consequence of cascading of high density water downwards to neutral density levels. Entrainment of warm layers by inflow gradients in the reservoirs of the summer rainfall regions of the subcontinent is a further important mechanism setting up TKE in the epilimnion. It may become dominant during periods of high river inflow and often precedes autumnal turnover.     

Numerical simulation of mechanical mixing in high solid anaerobic digester

Computational fluid dynamics (CFD) was employed to study mixing performance in high solid anaerobic digester (HSAD) with A-310 impeller and helical ribbon. A mathematical model was constructed to assess flow fields. Good agreement of the model results with experimental data was obtained for the A-310 impeller. A systematic comparison for the interrelationship of power number, flow number and Reynolds number was simulated in a digester with less than 5% TS and 10% TS (total solids). The simulation results suggested a great potential for using the helical ribbon mixer in the mixing of high solids digester. The results also provided quantitative confirmation for minimum power consumption in HSAD and the effect of share rate on bio-structure.     

Effect of increasing the surface area of primary sludge on anaerobic digestion at low temperature

Two sets of reactors were operated at 15 °C and at sludge retention times (SRTs) of 65 days and 30 days, respectively. Each set was operated at six different mixing velocities. Shear forces provided by mixing affected particle size distribution and resulted in different sludge surface areas. The aim was to investigate the effect of increasing primary sludge surface area on anaerobic digestion at low temperature. The maximum surface areas at the applied mixing velocities were 5926 cm²/cm³of sludge and 4672 cm²/cm³ of sludge at SRTs of 65 days and 30 days, respectively. The corresponding calculated methanogenesis were 49% and 15% at SRTs of 65 days and 30 days, respectively. Maximum total solids (TS) reductions were 26% and 11% at 65 days and 30 days SRTs, respectively. Lipase activity increased with increasing SRT and sludge surface area. Results clearly showed that increasing sludge surface area improved sludge digestion at 15 °C.     

Diet and behavior of the Saint-Césaire Neanderthal inferred from biogeochemical data inversion

Biogeochemistry is a powerful tool for dietary reconstruction, and mixing equations can be used to quantify the contribution of multiple sources to an individual's diet. The goals of this paper are: 1) to generalize the inverse method to dietary mixtures; and 2) to reconstruct the diet of the Saint-Césaire Neanderthal using Sr/Ca and Ba/Ca data of the mineral fraction of bone (hydroxylapatite), and with published delta13C and delta15N data of the associated organic fraction of bone (collagen). A new method is proposed to calculate the maximum diagenetic contribution of the Sr/Ba ratio, assuming that the soil soluble fraction is the diagenetic end-member and, for a given fraction of diagenesis, allows the restoration of the original Sr/Ba ratio. Considering the Saint-Césaire Chatelperronian mammalian assemblage as the meat source, and on the basis of available Sr, Ba, and Ca contents of plants, the results indicate that the percentage of plants in the Neanderthal's diet must have been close to zero for realistic Sr and Ba impoverishment between diet and hydroxylapatite. Contrary to previous studies, it is shown that fish could constitute a significant proportion (30%) of the diet of the Saint-Césaire Neanderthal. However, this mass balance solution is not supported by the zooarchaeological data. When the entire faunal assemblage is considered as the dietary source, the calculation shows that bovids (except reindeer) represent the greatest percentage of consumed meat (58%), followed by horses/rhinoceros (22%), reindeer (13%), and mammoths (7%). These respective percentages are in close accordance with zooarchaeological records, suggesting that the faunal assemblage associated with the Neanderthal of Saint-Césaire reliably reflects what he ate during the last few years of his life. In behavioral terms, this result supports the hypothesis that this Neanderthal carried the foodstuffs back to the Saint-Césaire shelter before their consumption.     

UVR-induced photosynthetic inhibition dominates over DNA damage in marine dinoflagellates exposed to fluctuating solar radiation regimes

The combined effect of solar radiation (UV-B (280-315 nm), UV-A (315-400 nm) and PAR (400-700 nm)) and vertical mixing (i.e., fluctuating radiation regimes) on the marine dinoflagellates Gymnodinium chlorophorum, Heterocapsa triquetra and Prorocentrum micans was investigated during the austral spring in Patagonia, Argentina. Photosynthesis, measured as radiocarbon incorporation, and accumulation of DNA damage, as cyclobutane pyrimidine dimers (CPDs), were investigated under simulated mixed and non-mixed water column conditions using 3 h incubations centered at local noon. Static samples had significant UVR-induced photoinhibition that was higher in H. triquetra as compared to the other two species. Increasing mixing speed significantly increased UVR-induced inhibition of carbon fixation in G. chlorophorum and H. triquetra. No significant UVR effect was observed in P. micans under any of the mixing regimes. Most of the loss in carbon fixation in G. chlorophorum was due to UV-B while in H. triquetra it was due to UV-A. Part of these responses may be associated to the presence of UV-absorbing compounds which were abundant in P. micans, and low in H. triquetra and in G. chlorophorum. However, other variables such as cell size and active repair might have also influenced our results. We did not detect CPD accumulation in any of the species, probably because of the low solar angle that resulted in very low levels of DNA effective UV-B dose. Our results indicate that exposure to solar UVR in the Patagonia area during spring time (even during ozone depletion events) has a clear impact on photosynthesis and much less or negligible on DNA in the three studied species.     

Equipment design considerations for large scale cell culture

Equipment design is frequently recognized as a key component in the success of GMP biologics manufacturing, but is not always implemented with full appreciation of the processing implications. In the case of mammalian cell culture, there are some recognized issues and risks that develop when transitioning to a large scale of operation. The developing demand for cell culture production capacity in the biopharmaceutical industry has led to a progressive increase in the scale of operation in the last decade. This review will provide a high level summary of the documented process difficulties unique to serum-free large scale (LS) cell culture, analyze the engineering constraints typical of these processes, and suggest some practical equipment design considerations to enhance the productivity, reliability and operability of such systems under GMP manufacturing conditions. A systems approach will be used to establish a good LS bioreactor design practice, providing a discussion on gas distribution, agitation, vessel design, SIP/CIP and control issues. This revised version was published online in July 2006 with corrections to the Cover Date.     

A novel technique for the measurement of temperature in outflow water from a coastal power plant, with notes on chlorination and phytoplankton determinations

This communication discusses a novel approach for the measurement of temperature in the mixing area of outflow water from Madras Atomic Power Station, located at a coastal site near Tamil Nadu, India. In addition, various environmental aspects such as chlorination, phytoplankton estimation and annual sea surface water temperature have also been addressed in this paper in the light of similar work published earlier from the same locality.     

Influence of biogas-induced mixing on granulation in UASB reactors

Studies have been carried out to correlate biogas-induced mixing and granulation in upflow anaerobic sludge blanket (UASB) reactors, treating low-strength as well as high-strength biodegradable wastewaters. A dimensionless granulation index (GI) has been framed taking into account the mixing in sludge bed due to produced biogas. Analysis of full-scale, pilot-scale and lab-scale UASB reactors treating actual wastewaters reveals the significance of biogas-induced mixing, represented by GI, on granulation of biomass in the reactors. For obtaining proper granulation in UASB reactors (percentage granules greater than 50%, w/w), resulting in higher chemical oxygen demand (COD) removal efficiency, it is recommended to maintain GI values in the range of 15,000–57,000.     

Comparing a range of impellers for “stirring as foam disruption”

The effectiveness of a range of impellers for “stirring as foam disruption” (SAFD) is assessed in a vessel of 0.72 m diameter and an aspect ratio of 2:1. Measurement of power drawn by the impeller achieving SAFD and of the three-dimensional flow field close to the dispersion surface are both used to explain the findings along with the global gas hold-up. A large radial flow Rushton turbine can disrupt foam at a great height but requires high power. Down-pumping hydrofoils are only effective when the ungassed liquid height is below the level of the impeller employed to disrupt foam. Up-pumping hydrofoils are the most effective because their flow pattern gives rise to high velocities across the dispersion surface, which are able to entrain foam in the downflow generated at the walls.